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6 protocols using anti runx2

1

Chromatin Immunoprecipitation of Runx2

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Chromatin was crosslinked, isolated, and digested with micrococcal nuclease to obtain DNA fragments. The chromatin extracts were immunoprecipitated using anti-Runx2 (Proteintech). IgG was used as mock ChIP controls. The Runx2-bound DNA of the SGMS1 gene promoter was evaluated using real-time quantitative PCR assay with gene promoter-specific primers.49 (link)
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2

Evaluating Osteogenesis-related Factors in BMSCs

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BMSCs were seeded in 6-well plates (8 × 104 cells per well) and cultured for 3 d. Total protein was extracted with RIPA tissue lysate supplemented with protein phosphatase and protease inhibitors and SDS-PAGE protein loading buffer. SDS-PAGE gel (Vazyme, China) electrophoresis was used to separate proteins with different molecular weights, and then the protein bands were transferred onto polyvinylidene fluoride (PVDF) membranes (Solarbio, China). After soaking in 5% skimmed milk for 1.5 h, the membrane was immersed in anti-RUNX-2 (1:2000 dilution, Proteintech, China), anti-COL-1 (1:2000 dilution, Proteintech, China), anti-OPN (1:800 dilution, Santa Cruz, USA), or anti-ALP (1:800 dilution, Santa Cruz, USA) primary antibody, overnight at 4 °C. The PVDF membrane was washed with TBST (1000 mL TBS +1 mLTween 20) solution and immersed in antirabbit or antimouse secondary antibody (1:1000 dilution, Proteintech, China) for 1 h. ECL luminescent liquid (NCM Biotech, China) was used for color development, and the levels of osteogenesis-related factors secreted by BMSCs in each group were evaluated.
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3

Western Blot Analysis of MSC Markers

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MSCs were lysed and the protein concentration was determined using the Pierce BCA Protein Assay Kit. Aliquots (40 μg) of protein solutions were resolved by 10% SDS-PAGE (Millipore, Billerica, MA) and transferred to PVDF membranes. The membranes were incubated with diluted anti-RUNX2, anti-PPARγ, anti-GAPDH, anti-β-catenin (ProteinTech), anti-CD9, anti-CD81, anti-Fas, anti-integrin alpha-5, anti-CD44, anti-p65 (Abcam), anti-calreticulin (Cell Signaling Technology), anti-AKT1 (Santa Cruz), anti-p-AKT1, anti-ERK and anti-p-ERK (Abclonal) primary antibodies, followed by the corresponding secondary antibodies (Cell Signaling Technology). Bands were detected using the ECL Kit (NCM bio, Suzhou, China). Images were analyzed using Image J software (National Institutes of Health, Bethesda, MD).
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4

Western Blot Analysis of Osteogenic Markers

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Western blotting was carried out as described previously.45 (link) Total protein was extracted from the cultured cells using RIPA lysis buffer (Beyotime, Nanjing, China), which was supplemented with a protease inhibitor cocktail according to the manufacturer’s instructions. The protein mixtures were centrifuged to remove cellular debris. The extracted proteins were separated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and electrotransferred to polyvinylidene fluoride (PVDF) membranes (Amersham, Little Chalfont, UK). The PVDF membranes were blocked for 2 h at room temperature using 5% non-fat milk (BD Biosciences, San Jose, CA). The membranes were incubated at 4 °C overnight with the following primary antibodies: anti-OCN (1:1 000; Boster Biological Technology, Wuhan, China), anti-BSP (1:1 000; Boster Biological Technology), anti-ALP (1:1000; Proteintech Group, Wuhan, China), anti-RUNX2 (1:1 000; Proteintech Group), and anti-GAPDH (1:1 000; Boster Biological Technology). Subsequently, the membranes were incubated with horseradish peroxidase (HRP)-conjugated secondary antibodies (ZSGB-Bio) for 1 h at room temperature. The immunoreactive bands were visualized using an ECL chemiluminescence reagent (Solarbio). The relative intensities were analyzed and compared to their respective controls using ImageJ software (NIH, USA).
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5

BMP-2 and Runx2 Expression Analysis

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Cells (5 × 106 per well) from each group were incubated in separate culture bottles. After 48 h of incubation, the cells were harvested, total protein was extracted, and protein concentrations were measured using a BCA kit (Takara Bio Inc., Shiga, Japan). Next, equal amounts (80 µg) of boiled protein were separated by 4–20% sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS–PAGE) using GAPDH as the internal loading reference and then transferred to a polyvinylidene fluoride (PVDF) membrane (Schleicher and Schuell, Keene, NH, United States). After blocking in 5% skimmed milk for 2 h at room temperature, the membrane was incubated with primary antibody (anti-BMP-2, anti-Runx2, or anti-GAPDH, diluted 1:2000) (Proteintech Co., Manchester, UK) at 4°C overnight, washed, and then incubated with horseradish peroxidase (HRP)-labeled goat anti-mouse IgG or goat anti-rabbit IgG (1:2,000, Santa Cruz Biotechnology, Inc., Dallas, TX, United States). Band intensities were measured after detection using enhanced chemiluminescence (ECL) reagent (Thermo).
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6

Protein Expression Analysis Protocol

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Equal amount of proteins were loaded onto 4-20% SDS-PAGE gels (Beyotime, Shanghai, China) and subjected to electrophoresis. PVDF membranes (Bio-Rad) were activated in methanol, and electrophoretic transfer was performed with the Trans-Blot Turbo Transfer system (Bio-Rad). The membranes were then immersed in fast-blocking buffer (EpiZyme, Shanghai, China) for 10 min, and probed with the indicated primary antibodies overnight in cold room. After being washed with TBST buffer, the membranes were incubated with secondary antibodies for 1 h at room temperature. The primary antibodies were listed as follows: anti-KLF9 (Abcam, Cambridge, UK), anti-GAPDH (Proteintech, Chicago, IL, USA), anti-ALP (Abcam), anti-Osx (Thermo Fisher Scientific, Waltham, MA, USA), anti-Dlx2 (Thermo Fisher Scientific), anti-BMP2 (Proteintech), anti-Runx2 (Proteintech), anti-COL1A1 (Proteintech), anti-Notch1 (Abcam), anti-HES1 (Thermo Fisher Scientific), and anti-HEY1 (Proteintech).
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