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5 protocols using ab238099

1

Western Blot Analysis of EMT Markers in HCC Cells

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Total protein was extracted from HCC cells using RIPA lysis buffer. Extracted proteins were subsequently loaded on SDS–polyacrylamide gels and then transferred to PVDF membranes which were blocked in 5% non-fat milk for 1 h and then incubated with primary antibodies against E-cadherin (1:1000, ab238099, Abcam, USA), N-cadherin (1:5000, Abcam) and GAPDH (1:2000, Abcam) at 4 °C overnight. Then, the membranes were incubated with anti-rabbit secondary antibodies (1:5000; Abcam). Finally, the signals were detected on the ECL chemiluminescence system.
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2

Western Blot Analysis of Apoptosis and EMT Markers

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We extracted the total protein with the help of RIPA lysate, then determined with the help of BCA kit, the matched samples were adjusted to the same concentration. After denaturation, we separated the proteins with the help of SDS-polyacrylamide gel electrophoresis and then transferred them onto PVDF membrane. We sealed the PVDF membrane for 1 h using 5% skimmed milk powder, then incubated the PVDF membrane overnight with the following primary antibodies against Bcl-2 (Abcam, ab32124, 1:1000), Bax (Abcam, ab32503, 1:1000), Vimentin (Abcam, ab137321, 1:2000), E-cadhetrin (Abcam, ab238099, 1:100), CyclinD1 (Abcam, ab134175, 1:5000), DNM3 (Abcam, ab134925, 1:1000) protein or GAPDH (Abcam, ab181602, 1:5000). We then incubated the PVDF membrane for 1 h with secondary antibody. ECL kit was used for chemiluminescence detection. The gray value of protein band was calculated using Image-Pro Plus.
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Membrane Protein Extraction and Analysis

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The treated HK2s and hRPTECs were washed thrice with PBS and lysed directly using Mem-PER plus membrane protein extraction kit for membrane protein extraction (Cat# 89842, Thermo Fisher Scientific) supplemented with Halt protease and phosphatase inhibitors (Cat# 78446, Thermo Fisher Scientific). Cytoplasmic and nuclear fractions were prepared using a cytoplasmic and nuclear protein extraction kit (BRARZ106, BioTools Co. Ltd., Taiwan), following the manufacturer’s instructions. The concentration of proteins was determined using the Bradford method. The proteins were resolved using SDS-PAGE. The resolved proteins were transferred to a polyvinyl difluoride membrane. The membrane was incubated with the indicated primary antibodies, followed by incubation with horseradish peroxidase-conjugated secondary antibodies in Tris-buffered saline with 5% (w/v) milk or 1% (w/v) bovine serum albumin. The primary antibodies used in this study including anti-E-cadherin (ab238099; Abcam, Cambridge, MA, USA), anti-beta actin antibody (ab8227; Abcam, Cambridge, MA, USA), anti-active β-catenin (#8814; Cell Signal, Danvers, MA, USA), anti-p65 (ab16502; Abcam, Cambridge, MA, USA), and anti-TBP antibodies (ab28175; Abcam, Cambridge, MA, USA). Immunoreactive signals were visualized using an enhanced chemiluminescent detection reagent (GE Healthcare Life Sciences).
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Protein Expression Analysis of Wnt and EMT Markers

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RIPA lysate (Beyotime, Beijing, China) was utilized to extract total protein from tissue or cell samples, followed by BCA protein quantification. 30 μg protein was taken for SDS-PAGE gel electrophoresis and transferred to membrane. Membranes were sealed with 5% skimmed milk powder solution at room temperature for 2 h. They were then incubated with monoclonal antibodies against AXIN2 (1/1000; ab109307, abcam, USA), LAMB1 (1/1000; ab256380), NOTUM (1/1000; ab106448), SERPINC1 (1/1000; ab124808), E-cadherin (1/1000; ab238099), Vimentin (1/1000; ab137321), Snail (1/1000; ab78105) and β-actin (1/5000; ab179467) at 4 °C overnight. On the next day, membranes were incubated by HRP-labeled IgG secondary antibody (1/1000; ab7090) at room temperature for 2 h. ECL chemiluminescence detection was presented. The expression of target proteins was quantified.
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5

Evaluating Protein Expression in NSCLC

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Non‐small cell lung cancernon‐small cell lung cancer cells were disrupted with Western cell lysis buffer (Beyotime), and the concentrations of protein samples were determined using the bicinchoninic acid (BCA) kit (Pierce Biotech). After separating by 10% separating gel, the protein samples were transferred onto the polyvinylidene difluoride (PVDF) membrane (Millipore). The membrane was sealed with 5% non‐fat milk and labeled with primary antibodies (Abcam) overnight at 4℃, including anti‐proliferating cell nuclear antigen (anti‐PCNA, ab280088, dilution of 1:1000), anti‐E‐cadherin (ab238099, dilution of 1:3000), anti‐Bcl‐2 associated X, apoptosis regulator (anti‐Bax, ab32503, dilution of 1:8000), anti‐SLC1A5 (ab237704, dilution of 1:1000), and anti‐GAPDH (ab8245, dilution of 1:10000). The membrane was then incubated with the secondary antibody (Abcam) for 2 h at room temperature. The protein signals were analyzed using the enhanced chemiluminescence reagents (Pierce Biotech). Image Lab analysis software (Bio‐Rad) was used to analyze the intensities of protein bands.
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