The largest database of trusted experimental protocols

128 protocols using tgf β

1

TGF-β Signaling Pathway Modulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were treated with TGF-β (5 ng/ml final; Sigma-Aldrich) for 8 h prior to protein isolation, and for 2 h, 8 h or 24 h prior to RNA isolation, unless noted otherwise. Cells were treated with 2APB (50 uM final; Sigma-Aldrich) for a period of 24 h prior to TGF-β treatment. Actinomycin D (1 ug/ml final; Sigma-Aldrich) treatments were for 1 h after stimulation with TGF-β. Cells were treated with 10 uM final SKF96365 hydrochloride (Sigma, #567310-M) for a period of 24 h prior to TGF-β treatment for 2 h. For treatment with p65 inhibitor ACHP, NMuMG cells were serum starved for 4 hours. After serum starvation, the cells were treated with 2APB for 24 hours. At 18 hours, the cells were treated with 50 uM of the NFKB inhibitor ACHP for a 4-hour pretreatment as previously published [39 (link)] before addition of TGF-β at 22 hours. For the AKT1/2 inhibitor, NMuMG cells were treated with 10 uM of the inhibitor at 20 hours for a 2-hour pretreatment as described previously [38 (link)] before the TGF-β treatment at 22 hours for 2 hours.
+ Open protocol
+ Expand
2

Modulating Smad2 and EZR-AS1 in Colorectal Cancer

Check if the same lab product or an alternative is used in the 5 most similar protocols
The shRNAs of EZR-AS1 (sh-EZR-AS1), EZR-AS1 negative control (NC-EZR-AS1), Smad2 (sh-Smad2), and Smad2 negative control (NC-Smad2) were purchased from Shanghai Jima Pharmaceutical Technology Co., Ltd. (Shanghai, China). Cells were cultured until 80% confluence and transfected with the specific shRNAs using Lipofectamine 2000 (Invitrogen, Carlsbad, CA, U.S.A.) for 48 h. In addition, HCT116 and HT29 cells were treated with 10 ng/ml TGF-β (Sigma, St. Louis, MO, U.S.A.), and TGF-β combined with 10 uM SB431542 (a TGF-β receptor blocker) (Sigma) for 72 h, Cells were used for further assays after the treatments.
+ Open protocol
+ Expand
3

Th17 Cell Differentiation Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Splenocytes from IL-21eGFP and WT mice were seeded at 8 × 105 cells in 0.2 ml/well into 48 well plates and stimulated with anti-CD3 (5 μg/ml) and anti-CD28 (1 μg/ml) antibodies (BD Biosciences). The cytokines IL-6 (20 ng/ml; R & D Systems) and TGFβ (5 ng/ml; BioLegend), anti-IL-4 antibodies (10 μg/ml; BioLegend), anti-IFNγ antibodies (10 μg/ml; BioLegend), and all trans retinoic acid (RA) (10 nM; Sigma) were added at the beginning of the cultures in various combinations (IL-6 alone; IL-6+TGFβ; IL-6+TGFβ+anti-IL-4+anti-IFNγ; IL-6+TGFβ+RA). Cells were cultured for 5 days and culture samples taken for analysis daily. The expression of GFP, Foxp3, and IL-17 were determined by intracellular staining, and the levels of IL-21 and IL-17 in culture supernatants were determined by ELISA.
+ Open protocol
+ Expand
4

TGF-β Signaling in A549 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Using A549 cells, we treated TGF-β (Sigma-Aldrich, #T7039). Before the treatment of TGF-β, cells were starved with 0.1% FBS for 24 h43 (link). After starvation, we treated 5 ng/ml TGF-β diluted with 2 mg/ml Bovine Serum Albumin (BSA, Sigma-Aldrich, #A9647) for 48 h with 0.1% FBS. In the case of the combination with TGF-β and Kv3.4 overexpression, Kv3.4-overexpressed cells were also starved with 0.1% FBS with G-418 for 24 h. And then, 2 ng/ml of TGF-β was treated in the cells for 24 h44 (link). After the treatment, the cells were prepared for RNA or protein extraction.
+ Open protocol
+ Expand
5

Modeling Renal Interstitial Fibrosis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immortalized proximal tubular epithelial cells (HK-2) were obtained from the American Type Culture Collection, and maintained in 90% high-glucose DMEM (Thermo Fisher Scientific, Inc.) supplemented with 10% FBS at 37˚C (5% CO2) in a humidified atmosphere. Subsequently, the cells were cultured with TGF-β (5 ng/ml; Sigma-Aldrich; Merck KGaA) for 48 h at 37˚C to establish an in vitro RIF cell model. In addition, the HK-2 cells were treated with hirudin (0.5 or 1 mg/ml; Sigma-Aldrich; Merck KGaA) in the presence or absence of 100 nM of S1P for 48 h at 37˚C or 50 µM of TFL (a PAR1 agonist; Sigma-Aldrich; Merck KGaA) for 2 h at 37˚C .Cells were also treated with 5 ng/ml TGF-β, followed by 10 µM JTE-013 (a S1PR2 antagonist; Sigma-Aldrich; Merck KGaA) for 2 h at 37˚C or 1 µM TY52156 (a S1PR3 antagonist; Sigma-Aldrich; Merck KGaA) for 2 h at 37˚C.
+ Open protocol
+ Expand
6

Optimal Conditions for Cell Line Culture and EMT Induction

Check if the same lab product or an alternative is used in the 5 most similar protocols
A549 and HEK293T cell lines were maintained in high glucose DMEM (Sigma-Aldrich) supplemented with 2 mM L-glutamine, 10% FCS and antibiotics (100 U/ml penicillin, 100 mg/ml streptomycin), and 1:100 Biomyc3 anti-mycoplasma antibiotic solution (Biological Industries, Beit HaEmek, Israel). Cells were grown at 37°C in a humidified atmosphere of 5% CO2 and 95% air. For TGFβ stimulation, cells were cultured with 5 ng/ml recombinant human TGFβ (PeproRTech) in cell medium. If cells were stimulated for more than 24 h with TGFβ, the TGFβ in the medium was refreshed every 24 h. For EMT induction in HMLE-Twist-ER cells, cells were treated with 10 nM 4-hydroxy tamoxifen (OHT) (Sigma-Aldrich, H7904) for the indicated number of days. During treatment, the medium was refreshed every 2 days.
+ Open protocol
+ Expand
7

Modulation of TGF-β-activated Hepatic Stellate Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human hepatic stellate cell line, LX-2, was used as cell model. LX-2 cells seeded in 6-well plate were cultured at 37°C in room air in incubator in Dulbecco's modified Eagle medium (Gibco, USA) with 5% CO2 supplemented with 10% fetal bovine serum (Gibco, USA), 100 U/ml penicillin and 100 mg/ml streptomycin. LX-2 cells were randomly divided into groups: Control, LX-2 cells were cultured under normal condition; TGF-β+PBS, LX-2 cells were stimulated by 2 ng/ml TGF-β1 (Sigma, USA) for 72 hours; TGF-β+3MA, TGF-β+Rapa, TGF-β+SN50, TGF-β+PMA+3MA, after treating with TGF-β1 48 hours, LX-2 cells were cultured with 3MA (1 mg/ml, Sigma), rapamycin (200 μg/ml; Sigma, USA), SN50 (80 μg/ml), Phorbol 12-myristate 13-acetate (PMA, 30 ng/ml, Sigma, USA) and 3MA (1 mg/ml, Sigma, USA), respectively. Cells were collected after culturing 72 hours.
+ Open protocol
+ Expand
8

Evaluating PFD's Impact on TGF-β-Induced EMT

Check if the same lab product or an alternative is used in the 5 most similar protocols
Breast cancer cell lines MDA‐MB‐231 were purchased from the Chinese Academy of Sciences, and cultured in L15 (Zhong Qiao Xin Zhou) medium supplemented with 10% Fetal Bovine Serum (FBS) and penicillin (100 IU/ml) /streptomycin (100 μg/ml) (Gibco) in a humidified incubator at 37°C. For testing the effect of PFD on TGF‐β‐induced activation of Smad signalling pathway and expression of EMT‐related genes, the breast cancer cells were pre‐treated with 5 ng/ml TGF‐β (Millipore Sigma) for 24 h, followed by addition of PFD (4 mM) or LY2109761 (2 μM) for another 24 h.
+ Open protocol
+ Expand
9

Multilineage Differentiation of Mesenchymal Stem Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The previously-described adherent cells were detached and labeled with CD19, CD34, CD73, CD90, CD45 and CD105 fluorescent conjugated antibodies (Becton, Dickinson and Company, NJ, USA). After evaluation by assessing the percentages of CD19(−), CD34(−), CD73(+), CD90(+), CD45(−) and CD105(+) cells, results of evaluation are displayed in Supplementary Figure S1A. The adipogenic, osteogenic and chrondrogenic differentiation abilities of the cells were also assessed in Figure S1C. For the adipogenic assay, 10000 MSCs were seeded into 24-well plates (per well) and cultured in DMEM (Sigma) containing 10% FBS and 100 mm/L indometacin, 10 μg/mL insulin, 0.5 mmol/L IBMX and 100 nmol/L dexamethasone (all Sigma) for every 3 day, then the cells were then stained with Oil Red O. For the osteogenic assay, 5000 MSCs (per well) were seeded into 24-well plates and cultured in DMEM (Sigma, City, CA, USA) containing 10% FBS and 0.1 μmol/L dexamethasone, 50 μmol/L ascorbic acid and 10 mmol/L β-glycerophosphate (all Sigma). After 4 weeks, the cells were stained with alizarin red (Sigma).For the chrondrogenic assay, 10000 MSCs were seeded into 24-well plates (per well) and cultured in DMEM (Sigma) containing 10% FBS and 10 ng/mL TGF-β, 10 μg/mL insulin and 100 nmol/L dexamethasone (all Sigma) for every 3 day, then the cells were then stained with toluidine blue.
+ Open protocol
+ Expand
10

Th17 Differentiation and Modulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
The isolated PBMCs were incubated with CD4 Biotin-Antibody cocktail from CD4+ T cell isolation kit (Miltenyi Biotec GmbH, Bergisch Gladbach, Germany), and treated with Anti-Biotin micro beads. MACS separator was then used to collect CD4+ T lymphocytes. The lymphocytes were incubated with 1 µg/mL anti-CD3 Mabs (Abcam, Cambridge, MA, USA), 10 µg/mL anti-CD28 Mabs (Abcam), 20 ng/mL TGF-β (Sigma-Aldrich), and 50 ng/mL IL-6 (Sigma-Aldrich) for the differentiation to Th17 cells. Differentiated Th17 cells were incubated with IL-35 (50 ng/mL; Sigma-Aldrich) for 3 days according to previous study (Th17 cell frequency and IL-17A concentrations in peripheral blood mononuclear cells and vitreous fluid from patients with diabetic retinopathy).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!