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4 protocols using ml130

1

Airway Epithelial Cell Immune Response

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Airway epithelial cells were cultured under ALI conditions as described and washed with BEBM before treatment. Cells were treated with iE-DAP (50ug/ml, Invivogen, San Diego CA), iE-LYS (50ug/ml; Invivogen, San Diego CA) or negative control media for 24 hr prior to supernatant harvest. For NOD1 inhibition, cells were pretreated with ML130 (1uM, Selleckchem, Houston, TX) for 1hr at 37°C, 5% CO2 before addition of iE-DAP or H. pylori. Similar procedures were performed using NF-kappaB inhibitor JSH-23 (10uM, ApexBio Tech, TX) and p38 MAP kinase inhibitor SB203580 (10uM, Selleckchem, Houston, TX) prior to addition of H. pylori.
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2

Ginsenoside and Bacterial Sensing Compounds

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Rg3 was purchased from (Sigma, St. Louis, USA) and dissolved in dimethyl sulfoxide. Ginsenoside Rb1 was obtained from the Korea Ginseng and Tobacco Research Institute (Daejeon, Korea) and dissolved in 100% ethanol. ML130 was purchased from Selleckchem (Houston, USA) and iE-DAP was purchased from InvivoGen (San Diego, USA). Rg3, Rb1, iE-DAP, and ML130 were used at the indicated doses and time points.
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3

Lysosomal Lipid Storage Modulation

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Small-molecule inhibitors were added to cell culture medium 1 h prior to stimulation. ML-130 (5 µM) and ponatinib (50 nM) were purchased from Selleck Chemical. Compound 21a (XIAP-Cp-21a, 1–2.5 µM) was kindly provided by TetraLogics Pharmaceuticals.26–28 (link) To induce the lysosomal lipid storage phenotype in MDM/PBMC, cells were pre-incubated with 2 µg/mL U18666A (Sigma-Aldrich) for 48/24 h. Other compounds were bafilomycin A1 (50 nM, Enzo Life Sciences), 2-hydroxypropyl-β-cyclodextrin (0.5–2%, Sigma-Aldrich), chlorpromazine (1–10 μg/mL, Merck Millipore), rapamycin (1–10 µM, Cayman Chemical), Torin 1 (10 µM, Tocris), d-(+)-trehalose dihydrate (100 mM, Sigma-Aldrich) and miglustat (4–400 µM, Tocris).
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4

Comprehensive Immune Receptor Agonist Library

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The following compounds were purchased from Invivogen (Ibian Technologies, Zaragoza, Spain): NOD1 and NOD2 agonist kit (#tlrl-nodkit2), containing C12-iE-DAP, iE-DAP, murmyl-dypeptide (MDP), L18-MDP, M-TriDAP, M-TriLYS, murabutide, PGN-ECndi and TriDAP, were purchased from Invivogen (Ibian Technologies, Zaragoza, Spain); Human TLR3/7/8/9 Agonist Kit (#TLRL-KIT3HW3), containing Poly(I:C) (HMW), Poly(I:C) (LMW), Poly(A:U), Imiquimod, R848, CL075, ssRNA40/LyoVec, ssRNA41/LyoVec, ODN2006, ODN2006control, ODN2216, ODN2216control, ODN2395 and ODN2395control; CU-CPT9a, ODN2088, MRT67307, BX795, BAY 11-7082, Pepinh-MYD, Pepinh-MYD Control, Pepinh-TRIF, Pepinh-TRIF Control, L-Kynurenine, 3p-hpRNA, G3-YSD, G3-YSD Control, H-151, G-140, Indirubin, VACV-70/LyoVec, VACV-70c control, HSV-60, Control for CDS Ligands HSV-60/LyoVec, Poly(dA:dT) LyoVec and Poly(dG:dC) LyoVec. NOD inhibitors NOD-IN-1 and ML130 were purchased from Selleckchem (Munich, Germany). Poly(I:C), lipopolysaccharide (LPS, #L6529) and PMA (#P1585) were obtained from Sigma-Merck, Burlington, MA, USA. All compounds were reconstituted in dimethyl sulfoxide (DMSO) or water according to manufacturer’s instructions and stored at −20 °C until use.
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