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4 protocols using alexa fluor 568 conjugated goat anti rabbit igg

1

Nerve Injury Evaluation Using Immunostaining

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At 28 days following the operation, the sciatic nerve tissues containing the area of crush injury site (5 mm away from the sciatic notch) were harvested and fixed with 4% paraformaldehyde. Then the longitudinal sections and transverse sections of the nerve tissue were prepared. Moreover, the sections were stained with NF200 (CST, 1:200), S100β (Abcam, 1:200), TuJ1 (Abcam, 1:200), MBP (Abcam, 1:200), CD31 (Abcam, 1:200), CD34 (Abcam, 1:200), VEGFR (Abcam, 1:200), GAPDH (Abcam, 1:200), Akt (Abcam, 1:500), p-AKT (Abcam, 1:500), PI3K (Abcam, 1:500), p-PI3K (ThermoFisher, 1:500) and PTEN (Abcam, 1:500). Secondary antibodies were as follows:Alexa Fluor568–conjugated Goat Anti-Rabbit IgG (Abcam), CoraLite594-conjugated Goat Anti-Mouse IgG (Proteintech, China), CoraLite488-conjugated Goat Anti-Rabbit IgG (Proteintech), CY3-labeled goat anti-rabbit (Servicebio) and AlexaFluor594-labeled goat anti-rabbit IgG (Abcam). Besides, we also used FITC-Tyramide (Servicebio) and CY3-Tyramide (Servicebio) to amplify fluorescence intensity. Nuclei were stained with DAPI, and the sections were observed under confocal laser scanning microscopy. The percentages of the markers positive areas were calculated by dividing integrated option density by selected region area, then multiplied by 100%. All parameters were measured using ImageJ.
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2

Striatal Tissue Immunofluorescence Labeling

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Slices of mouse striatal tissue were blocked with 5% goat serum (ImmunoReagents, USA), and incubated with primary antibodies against TH (1:500, Santa Cruz) overnight at 4 ◦C. Then, Alexa Fluor 568-conjugated goat anti-rabbit IgG (1:1000, Abcam) and Alexa Fluor 488-conjugated goat anti-mouse IgG (1:1000, Invitrogen) were incubated at room temperature for 1 h. Next, sections were stained with 4′,6-diamidino-2′ -phenylindole (Sigma, USA). Finally, the fluorescence changes were observed through a fluorescence microscope, green fluorescence intensity represents the expression level of TH- positive cells (Olympus, Japan).
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3

Quantifying Autophagosome Formation via LC3B Puncta

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Cultured cells were grown on glass coverslips overnight to detect the LC3B puncta. Cells fixed with 4% paraformaldehyde (BOSTER) were treated with 0.2% Triton X-100 and blocked with 2% albumin from bovine serum (BSA). Then, cells were incubated with a primary anti- LC3B antibody (#ab48394, 1:200; Abcam) at 4 °C overnight. After the incubation of Alexa Fluor 568-conjugated goat anti-rabbit IgG (#ab175694, 1:1000; Abcam), cells were stained with 0.2 mg/mL DAPI and imaged with a confocal microscope (Zeiss LSM710, Carl Zeiss, Dresden, Germany). The LC3B puncta were measured using Image Pro-plus 6.0 software (Media Cybernetics). Five different pictures were measured for each group.
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4

Spinal Cord Injury Immunohistochemistry

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Mice were sacrificed 14 days after SCI and were perfused with 4% paraformaldehyde. Spinal cord samples were harvested and dehydrated, using graded sucrose, and then embedded in OCT at –20°C. The samples were cut into 8-μm thick sections, with a freezing microtome (CM 1900; Leica, ↱Wetzlar, Germany), and stored at –80°C. Before immunostaining, the frozen sections were allowed to come to room temperature for 10 minutes and then were washed three times with phosphate-buffered saline. After blocking with 5% fetal bovine serum, the sections were incubated with rabbit anti-glial fibrillary acidic protein polyclonal antibody (1:500; Cat# ab7260; Abcam), overnight at 4°C. Afterward, the sections were covered with AlexaFluor568-conjugated goat anti-rabbit IgG (ready to use; Cat# ab11011; Abcam) and were incubated for 60 minutes, at room temperature. Subsequently, these sections were stained with 4′,6-diamidino-2-phenylindole (Cat# ab104139; Abcam). Immunostained sections were analyzed under a fluorescence microscope (TCS-SP8; Leica).
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