The largest database of trusted experimental protocols

15 protocols using ab153696

1

Immunofluorescent Staining of Neurological Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tissue sections were fixed with 4% PFA solution for 15 min, incubated with 0.3%
TritonX-100 (Sangon Biotech; China; 9002-93-1) for 5 min, and blocked with
immunostaining blocking solution (Beyotime; China; P0260) at room temperature
for 1 h. Finally, 300 μl of primary antibodies against NeuN (Abcam; UK;
ab177487; 1:200), GFAP (Abcam; UK; ab33922; 1:500), Iba1 (Abcam; UK; ab153696;
1:100), iNOS (Abcam; UK; ab178945; 1:500), CD68 (Santa Cruz; USA; sc-70761;
1:50), and CD206 (Santa Cruz; USA; sc-70585; 1:50) were added and incubated
overnight at 4°C. The next day, the samples were washed with tris-buffered
saline (TBS) three times for 10 min each. Thereafter, CY™ 3 affinity goat
anti-rabbit IgG (Jackson ImmunoResearch, USA; 111-165-003; 1:500) and CY™ 3
affinity goat anti-mouse IgG (Jackson ImmunoResearch, USA; 115-165-003; 1:500)
secondary antibodies were incubated at 4°C in the dark for 4 to 6 h, and then
washed with TBS three times for 10 min each time. 4′,6-diamidino-2-phenylindole
(DAPI) (BIOSHARP; China; BS097; 1:1,000) was stained, and 10 μl
anti-fluorescence quenching agent (vector labs; USA; H-1200) was added. Then,
microscopic examination was performed.
+ Open protocol
+ Expand
2

Western Blot Analysis of Spinal Cord

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mice were transcardially perfused with cold phosphate-buffered saline (PBS) and then the spinal cords were isolated from spinal columns for western blot analysis. Western blots were performed using WES, an automated capillary-based size sorting system (ProteinSimple, San Jose, CA, USA)14 (link). All procedures were performed according to the manufacturer’s protocol. Briefly, 8 μL of diluted protein lysate was mixed with 2 μL of 5× fluorescent master mix and heated at 95 °C for 5 min. The samples, blocking reagent, wash buffer, primary antibodies, secondary antibodies, and chemiluminescent substrate were dispensed into designated wells in a microplate provided by the manufacturer. The plate was loaded into the instrument and protein was drawn into individual capillaries on a 25 capillary cassette provided by the manufacturer. Protein separation and immunodetection was performed automatically on the individual capillaries using default settings. The data was analyzed with Compass software (ProteinSimple). Primary antibodies used were anti-Iba1 antibody (abcam, ab153696), anti-βIII Tubulin antibody (abcam, ab78078), anti-GFAP antibody (abcam, ab4674), and anti-Olig2 antibody (abcam, ab109186).
+ Open protocol
+ Expand
3

Immunohistochemical Profiling of Macrophage and Microglial Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunohistochemical assessment of the macrophage phenotype markers CD8, CD68, and CD 163 and the microglial marker Iba-1 was performed using the avidin–biotin peroxidase method as described previously (Magdy et al., 2021 (link)). Briefly, paraffin-embedded brain sections were dewaxed in xylene, rehydrated in a decreasing alcohol gradient, and microwave-treated (0.01 M trisodium citrate), for antigen retrieval. Quenching of the endogenous peroxidase activity was achieved via incubation in 10% Hydrogen peroxide. The sections where then incubated with the primary antibodies, as follows: anti-CD8 antibody (Thermo Fisher Scientific, MA5-13473, 1:25), rabbit polyclonal anti-ionized calcium-binding adapter molecule 1 (IBA1) antibody (ab153696, 1:500, Abcam®), rabbit monoclonal anti-CD86 antibody [C86/2160R] (ab234401, 1:50, IHC-P, Abcam®), and anti-CD163 antibody [EPR19518] (ab182422) (1:100, Abcam®, Cambridge, MA, United States). Staining was completed by incubation with the substrate-chromogen 3,3′- diaminobenzidine (DAB) and counterstaining with hematoxylin. The mouse spleen tissue was used as the positive control, whereas the negative controls were obtained through omission of the primary antibodies in the automated staining protocol.
+ Open protocol
+ Expand
4

Multimodal Immunofluorescence Imaging of Brain Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Brains were postfixed overnight in 4% PFA before being dehydrated with sucrose solution (10%, 20%, 30%) for 3 days at 4 ℃. Brains were cut into 50-μm-thick sections in the coronal plane. Sections containing DLS and DMS were rinsed with 0.5% Triton X-100 (Solarbio, China) for 5 min, and blocked with 5% BSA (Sangon Biotech, China) for 1 h at room temperature. Then, the sections were incubated with mouse anti-CD31 (ab64543, 1:200, Abcam, UK), rabbit anti-claudin 5 (ab15106, 1:200, Abcam, UK), chicken anti-GFAP (ab4674, 1:2000, Abcam, UK), rabbit anti-Iba1 (ab153696, 1:500, Abcam, UK), rabbit anti-IL17A (A0688, 1:50, Abclonal) and mouse anti-CD4 (67786-1-lg,1:200, Proteintech) antibodies for 48 h at 4 ℃ in the dark. Then, the sections were incubated with Alexa-568 donkey anti-rabbit IgG (ab175470, 1:1000, Abcam, UK), Alexa-488 donkey anti-mouse IgG (ab150105, 1:1000, Abcam, UK), and Alexa-594 goat anti-chicken IgG (ab150172, 1:1000, Abcam, UK) for 2 h at room temperature. Finally, sections were mounted on slides with Fluoroshield™ with DAPI (F6057, Sigma-Aldrich, USA). Images were captured with a Nikon A1R HD25 confocal microscope system (Nikon, Japan). Immunofluorescence quantification was performed as previously described [24 ] and detailed in the Additional file 1.
+ Open protocol
+ Expand
5

Immunofluorescence Assay for Microglial Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
The immunofluorescence assay was conducted following the previously reported methods with minor changes (Wu et al., 2019 (link)). The paraffin-embedded slices were obtained in the same way as above. Similarly, the slices were permeated with 0.3% Triton X-100 for 30 min and blocked them with 5% BSA for 25 min, followed by the incubation with anti-Iba-1 (ab153696, 1:500, Abcam; sc-32725, 1:100, Santa Cruz Biotechnology), anti-CD86 (sc-28347, 1:100, Santa Cruz Biotechnology), anti-iNOS (ab178846, 1:500, Abcam), anti-CD206 (60143-1-1g, 1:100, Proteintech), anti-CD163 (ab182422, 100, Abcam) and anti- p-JNK (sc-6254, 1:200, Santa Cruz Biotechnology) overnight at 4°C. The slices were then incubated with the secondary antibodies for nearly 30 min at RT. Cell nuclei were stained using 4′,6-diamidino-2-phenylindole (DAPI, Thermo Fisher Scientific, MA, United States). The “sham”, “control” and “vehicle” were applied as the controls. The images were acquired by a fluorescence microscope (Olympus OX51).
+ Open protocol
+ Expand
6

Iba-1 Immunostaining in Ischemic Brain

Check if the same lab product or an alternative is used in the 5 most similar protocols
Twenty-four hours after ischemia, the brain was sectioned and samples were placed onto slides and then processed for immunofluorescence staining. Sections were incubated with 0.3% Triton X-100 in PBS (30 minutes at room temperature). The antigen retrieval (citrate solution at 95°C for 20 minutes) followed. After passive cooling down to the room temperature, sections were incubated for 2 hours with 10% goat serum. After overnight incubation with Iba-1 primary antibody (rabbit; 1:1000; ab153696; Abcam, Cambridge, UK) at 4°C, sections were rinsed with PBS thrice. A 2 hours incubation with secondary antibodies at room temperature followed. After rinsing with PBS, visualization was done with fluorescence microscope (AXIO SCOPE A1, ZEISS, Stockholm, Sweden). At least three sections from each mouse were randomly selected for analysis.
+ Open protocol
+ Expand
7

Microglial Activation Imaging in Hippocampus

Check if the same lab product or an alternative is used in the 5 most similar protocols
After xylene deparaffinization, the hippocampus tissue sections were washed by 0.1M PBS and microwave repaired for 15 min, blocked with 10% normal goat serum for 20 min, followed by the addition of 300 µL of primary antibodies (rabbit anti-rat Iba-1; 1:200; ab153696, Abcam, Cambridge, UK) for overnight incubation. After washing by PBS, sections were incubated with a fluorescent secondary antibody (Alexa Fluor® 488-labeled Goat anti rabbit; 1:300; ab150077, Abcam, Cambridge, UK) for 2 h in the dark, washed three times with PBS, and mounted using anti-fluorescence quencher containing DAPI. Ultimately, a confocal laser-scanning microscope was utilized to observe and photograph the sections (magnification, ×200; Olympus FV1000, Olympus, Tokyo, Japan).
+ Open protocol
+ Expand
8

Protein Analysis of Brain Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
The protein was extracted from brain tissues using an Ambion PARIS kit (Solarbio, Beijing, China) with addition of phosphatase and protease inhibitor cocktails (Roche). The Pierce BCA Protein Assay Kit (Cat.#23227, Thermo Fisher) was used to detect protein concentrations. The proteins were separated by SDS-PAGE electrophoresis, and a blotted membrane was incubated with blocking buffer and then with anti-Claudin 5 (1 : 500, ab15106, Abcam, USA), anti-Iba1 (1 : 1000, ab153696, Abcam, USA), anti-GFAP (1 : 1000, Cat.#12389, CST, USA), anti-MBP (1 : 1000, Cat.#13344, CST, USA), or anti-NF-L (1 : 1000, Cat.#AB9568, Millipore, USA) primary antibody at 4°C overnight before addition of horseradish peroxidase- (HRP-) linked goat anti-rabbit (1 : 1000, Cat.#7074, CST, USA) or goat anti-mouse secondary antibody (1 : 25000, Cat.E030110-01, EarthOx, USA). Detection of β-tubulin was performed on stripped membranes with anti-β-tubulin (1 : 1000, ab179513, Abcam, USA) primary antibody to control for protein loading. Protein signal was visualized with the LumiGLO chemiluminescent substrate (Cat.#7003S, CST, USA), and target protein expression was normalized as fold change relative to β-tubulin expression using Photoshop for quantitative analysis.
+ Open protocol
+ Expand
9

Prorenin Receptor Activation and Inflammasome

Check if the same lab product or an alternative is used in the 5 most similar protocols
N-acetylcysteine (NAC; A7250), dimethyl sulfoxide, 4′,6-diamidino-2-phenylindole, and anti-β-actin (A1978) were from Sigma-Aldrich (St. Louis, MO). Recombinant human prorenin was from Abcam (ab93266; Cambridge, MA) and MCC950 (sc-505904) was from Santa Cruz Biotechnology (Santa Cruz, CA). The ROS fluorescent probe-DCFH-DA kit (S0033) and caspase 1 activity assay kit (C1101) were from the Beyotime Institute of Biotechnology (Nanjing, China). The following antibodies were used: sheep monoclonal antiserum against prorenin/renin (GTX7967, Gene Tex, San Antonio, TX); rabbit polyclonal antiserum against PRR (bs-7691R, Bioss, Beijing, China); rabbit polyclonal antiserum against caspase-1 (D7F10); rabbit anti-ASC monoclonal antibody (#13833), anti-CD86 (#91882), and anti-CD206 (#91992) were from Cell Signaling Technology (Beverly, MA); mouse monoclonal antiserum against CD11b/c (OX42, ab1211), mouse monoclonal to IL-6 (ab9324), iNOS (ab15323), Arg (ab60176), Iba-1 (ab153696), GFAP (ab7260), PGP 9.5 (ab10410), and rabbit polyclonal antiserum against NLRP3 (ab214185) were from Abcam. Donkey anti-sheep IgG H&L Alexa Fluor 555 (ab150178), goat anti-rabbit IgG H&L Alexa Fluor 594 (ab150080), and goat anti-mouse IgG H&L Alexa Fluor 488 (ab150117) were from Abcam. MCC950 was from Adipogen Corp. (San Diego, CA). PLX5622 was from Plexxikon (Berkeley, CA).
+ Open protocol
+ Expand
10

Immunofluorescent Staining of Brain Sections

Check if the same lab product or an alternative is used in the 5 most similar protocols
Brains were removed and fixed with 4% paraformaldehyde at 4 °C overnight. Frozen sectioning was performed after sucrose gradient dehydration followed by blocking with 10% goat serum containing 0.5% Triton X-100 at room temperature for 30 min. Brain sections were incubated with different primary antibodies at 4 °C overnight, including anti-MPO (Abcam, ab90812, 1: 1000), anti-NeuN (Abcam, ab177487, 1: 1000), anti-CD31 (Abcam, ab222783, 1: 1000), anti-Iba-1 (Abcam, ab153696, 1: 1000), anti-GFAP (Abcam, ab7260, 1: 1000) antibodies. The sections were washed with PBS 3 times and incubated with the mixture of Alexa Fluor 488 conjugated goat-anti-mouse IgG (Beyotime, A0428, 1: 500) or Alexa Fluor 555 conjugated donkey-anti-rabbit IgG (Beyotime, A0453, 1: 500) for 1 h in darkness at room temperature, followed by staining with DAPI for 5 min. After being washed with PBS 3 times, sections were mounted with fluorescent mounting medium (Dako, S3023), and examined by a confocal laser scanning microscope (LSM 780, Carl Zeiss).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!