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3 protocols using rabbit polyclonal anti hif 2α

1

Antibodies for HIF1α and Related Proteins

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We used the following antibodies: mouse monoclonal anti-HIF1α (clone 54, BD Biosciences, 610959); rabbit polyclonal anti-hydroxy-HIF1α-Pro-402 (Millipore, 07-1585); rabbit monoclonal anti-hydroxy-HIF1α-Pro-564 (clone D43B5, 3434), rabbit monoclonal anti-ARNT (clone D28F3, 5537), rabbit monoclonal anti-LSD1 (clone C69G12, 2184), and rabbit polyclonal anti-HDAC1 (2062) from Cell Signaling Technology; rabbit polyclonal anti-HIF2α (Novus Biologicals, NB100-122), mouse monoclonal anti-SREBP1 (clone 2A4, SC-13551), mouse monoclonal anti-Rieske FeS (RISP) (clone A5, SC-271609), and anti-PCNA (clone PC10, #SC-56) from Santa Cruz Biotechnology, Inc.; rabbit anti-thioredoxin (T0803) from Sigma; IRDye 800CW– or IRDye 680RD–conjugated goat anti-mouse or anti-rabbit secondary IgG from LI-COR; Alexa 594–conjugated goat anti-mouse (A11005) IgG from Invitrogen; and peroxidase affiniPure goat anti-rabbit IgG (111-035-144) from Jackson ImmunoResearch Laboratories.
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2

Antibody validation for HIF-1/2α ChIP-seq and Western blot

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The following antibodies were used for ChIP-seq: rabbit polyclonal anti-HIF-2α (Novus Biologicals, Centennial, CO, #NB100-122), mouse monoclonal anti-HIF-1β (Novus Biologicals, #NB100-124), rabbit polyclonal anti-V5 (Abcam, Cambridge, UK, #ab9116). The following antibodies were used for Cut&Run: mouse monoclonal anti-V5 tag (Thermo Fisher, #R960-25) diluted to 0.01 mg/ml, mouse IgG (Jackson ImmunoResearch #015-000-003) diluted to 0.01 mg/ml, rabbit anti-mouse IgG H&L (Abcam, #ab46540) diluted to 0.01 mg/ml. The following antibodies were used for western blotting: rabbit monoclonal anti-HIF-2α (Cell Signaling, Danvers, MA, #D9E3) diluted at 1:1000, rabbit monoclonal anti-HIF-1β (Cell Signaling, #D28F3) diluted at 1:1000, mouse monoclonal anti-V5 tag (Thermo Fisher, #R960-25) diluted at 1:2500, mouse monoclonal anti-HaloTag (Promega, Madison, WI, #G9211) diluted at 1:1000, mouse monoclonal anti-TBP (Abcam, #ab51841) diluted at 1:2500, goat-anti-mouse-HRP (Thermo Fisher, #31430) diluted at 1:2000, goat-anti-rabbit-HRP (Thermo Fisher, #31462) diluted at 1:2000.
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3

Antibodies for ChIP-seq and Western Blotting

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The following antibodies were used for ChIP-seq: rabbit polyclonal anti-HIF-2α (Novus Biologicals, Centennial, CO, #NB100-122), mouse monoclonal anti-HIF-1β (Novus Biologicals, #NB100-124), rabbit polyclonal anti-V5 (Abcam, Cambridge, UK, #ab9116). The following antibodies were used for western blotting: rabbit monoclonal anti-HIF-2α (Cell Signaling, Danvers, MA, #D9E3) diluted at 1:1000, rabbit monoclonal anti-HIF-1β (Cell Signaling, #D28F3) diluted at 1:1000, mouse monoclonal anti-V5 tag (ThermoFisher, # R960-25) diluted at 1:2500, mouse monoclonal anti-HaloTag (Promega, Madison, WI, # G9211) diluted at 1:1000, mouse monoclonal anti-TBP (Abcam, #ab51841) diluted at 1:2500, goat-anti-mouse-HRP (ThermoFisher, #31430) diluted at 1:2000, goat-anti-rabbit-HRP (ThermoFisher, # 31462) diluted at 1:2000.
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