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11 protocols using d0627

1

Decidualization Induction in MenSCs

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Upon reaching 70% confluence in the petri dish, the MenSCs were subjected to a medium change with differentiation media. Specifically, the differentiation medium was supplemented with 10 nM/L 17-β-E2 (abs47006987, Absin, China), 1 uM/L MPA (abs44122880, Absin, China), and 0.2mM/L cAMP (D0627, Sigma, USA). After 14 days, the induction of decidualization was brought to a halt (n=3).
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2

Adenoviral Overexpression of YAP in Retinal Stem Cells

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RSCs were generated and cultured as described previously55 (link)56 (link). Briefly, passage 9 RSCs were grown on PDL to 80% confluence when they were infected with control GFP or YAP S127A Flag adenovirus (2 μl per 962 mm2) for 16 h in growth medium DMEM/F12 (D6421, Sigma) supplemented with 2 μm forskolin (F6886, Sigma) and 4 μg ml−1 bovine pituitary extract (BT215, Alfa Aesar). For differentiation, RSCs were growth-arrested in defined medium56 (link) for 8 h and then supplemented with 1 mM dbcAMP (D0627, Sigma). Forty-eight hours later cells were scraped and protein extracted by sonication in standard RIPA buffer and processed for western blot.
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3

Mouse Oocyte Meiotic Maturation

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Oocytes were collected from ovaries of 8–10-week-old mice and cultured at 37 °C under mineral oil in homemade M2 medium or M16 medium (Sigma; MR-016), supplemented with 250 µM dbcAMP (Sigma; D0627) to maintain prophase arrest. To trigger the resumption of meiosis, oocytes were released into dbcAMP-free medium.
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4

Differentiation of SH-SY5Y Cells

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SH-SY5Y cells (RRID: CVCL_0019) were differentiated as previously described in detail by Shipley et al. [27 ]. Briefly, SH-SY5Y cells below passage 15 were seeded at 5–6 ×103 cells/cm2 in uncoated 6-well plates (day 0 (D0)) and left overnight in growth media. The next day (D1) differentiation was initiated using DMEM/F:12 media with 2.5% hiFBS, 1% p/s, 2 mM glutamine and 10 μM retinoic acid (RA, R2625 Sigma-Aldrich) and media was replaced at D3 and D5. On D7 cells were split 1:1 using 0.05% trypsin-EDTA to uncoated dishes and on D8 hiFBS content was reduced to 1%. On D10 the cells were split 1:1 to extracellular matrix-coated dishes (E0282, Sigma-Aldrich). On D11 media was replaced with the final differentiation media consisting of neurobasal media (21103049, ThermoFisher) with 1X B27 supplement (17504044, ThermoFisher), 20 mM KCl (10697623, Fisher Scientific), 1% p/s, 1X Glutamax, 50 ng/ml brain-derived neurotrophic factor (BDNF, CST-3897S, Peprotech), 2 mM dibutyryl cyclic AMP (db-cAMP, D0627 Sigma-Aldrich) and 10 μM RA. Media was replaced on D14 and D17 and cells were tested and confirmed as fully differentiated on D18 and used for downstream applications as outlined below.
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5

Culture and Decidualization of HESC

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Immortalized HESC line was purchased from the American Type Culture Collection (ATCC CRL-4003) and cultured according to the manufacturer’s instructions (Krikun et al., 2004 (link)). The identity of the cell lines has been authenticated by ATCC, and we have confirmed that the cell lines tested negative for mycoplasma contamination. Briefly, HESC was cultured in Dulbecco’s modified Eagle’s medium (DMEM)/F12 (Gibco) supplemented with 1% penicillin and 1% streptomycin, 10% charcoal-stripped fetal bovine serum (CS-FBS, Biological Industries), 3.1 g/l glucose, 1 mM sodium pyruvate, 1% Insulin-Transferrin-Selenium (ITS) (Gibco), and 500 ng/ml puromycin at 37°C in a humidified chamber with 5% CO2. To induce decidualization in vitro, HESC was treated with differential medium (DMEM/F12 with 2% CS-FBS) containing 1 μM medroxyprogesterone 17-acetate (MPA, Sigma, M1629), and 0.5 mM dibutyryl cAMP (dbcAMP, Sigma, D0627). The medium was changed every 48 hr. Other reagents including inhibitors, activators are listed in Supplementary file 1B.
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6

In Vitro Ovarian Culture System

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A safe and effective in vitro ovarian culture system has been established in our lab (10 (link), 11 (link)). Neonatal mice were sacrificed by cervical dislocation at the designated times. The ovaries were separated in cold phosphate-buffered saline (PBS) under the microscope. The isolated ovaries were incubated in 6-well culture dishes (NEST, China), and an insert (PICM0RG50, Millipore, USA) was placed in every well with 3 mL Dulbecco Modified Eagle Medium/Ham F12 nutrient mixture (DMEM/F12) (Gibco, Life Technologies, CA) supplemented with insulin-transferrin-sodium selenite (1:100, Sigma, USA) and penicillin-streptomycin solution at 37 °C, 5% CO2 and saturated humidity. Ovaries were randomly assigned, and cultured for 1–7 days in basal medium alone or basal medium supplemented with either dbcAMP (10 μM, D0627, Sigma, USA), MDL-12,330 (5 μM, M182, Sigma, USA), Milrinone (10 μM, 78415-72-2, J&K, China) or H 89 2HCL (5 μM, S1582, Selleck, China), respectively.
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7

Cellular Morphology Analysis of dbcAMP

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Cells were inoculated into the indicated medium at a density of 5 × 105 cells per ml from a YPD overnight culture. Medium amended with 10 mM dbcAMP from a 100 mM stock solution of dbcAMP (D0627; Sigma) in water. Cultures were incubated at 37°C for 3 h in glass-bottom 12-well dishes and then fixed with 0.37% formaldehyde, and morphological assessments by DIC microscopy were performed on an inverted microscope.
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8

Culturing N9 Microglial and MES 23.5 Dopaminergic Cells

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The murine N9 microglial cell line was provided by Dr Paola Ricciardi-Castagnoli (Singapore Immunology Network, Agency for Science, Technology and Research, Singapore). The N9 microglial cells were cultured in Roswell Park Memorial Institute medium (RPMI 1640; Invitrogen, 21,875-091) supplemented with 10% FBS, 2mML-Glutamine (Sigma, G6392),100 U/ml penicillin, and 100 mg/ml streptomycin, and the cultures were maintained at 37°C, 95% air, and 5% CO2 in a humidified incubator [67 (link)]. The cells were then seeded onto 35-mm culture dishes (0.5 x106 cells/ well) for analysis.
Dopaminergic MES 23.5 cells, a gift from Dr Wei-dong Le (Baylor College of Medicine, TX, USA), were cultured in DMEM/F12 containing Sato components growth medium supplemented with 2% fetal bovine serum (FBS), 100 units/ml penicillin, and 100 mg/ml streptomycin at 37°C in a humidified CO2 incubator (5% CO2, 95% air) [68 (link)]. For experiments, MES 23.5 cells were plated at a density of 0.5 × 105/cm2 onto 35-mm plastic dishes, glass coverslips, previously coated with poly-L-ornithine (P-4638, Sigma; 10 mg/ml). Cells were stimulated to enhance differentiation by adding dibutyryl-cAMP (D0627, Sigma; 1 mM) to the supplemented growth medium, and they were grown to 80% confluence before the start of any treatment.
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9

Neurog1/2-Driven Neural Differentiation

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0.5 μg/ml doxycycline (D9891, Sigma-Aldrich) was used to induce Neurog1 and -2 genes. After 4 dpi, half of the mTeSR 1 media was replaced with supplemented BrainPhys media (05790, StemCell Technologies), replaced daily until 7 dpi and further once per week. The following BrainPhys supplements were used for 10 ml media: 200 μl NeuroCult™ SM1 Neuronal Supplement (05711, Stemcell Technologies); 100 μl N2 Supplement-A (17502048, Thermo Fisher Scientific); 20 μl of 10 μg/ml recombinant human BDNF to a final concentration of 20 ng/ml (450-02, Peprotech); 20 μl of 10 μg/ml recombinant human GDNF to a final concentration of 20 ng/ml (450-10, Peprotech); 98 μl of 50 mg/ml dibutryl-cAMP to a final concentration of 1 mM (D0627, Sigma-Aldrich); 50 μl of 40 mM ascorbic acid to a final concentration of 200 nM (A0278, Sigma-Aldrich); and 100 μl of 100× penicillin-streptomycin (15140122, Thermo Fisher Scientific). After stable integration of the Neurog1/2 cassette to CRTD5 cells, the cells were differentiated similarly to iNGN cells.
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10

Toxoplasma Infection of Induced Neurons

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At the time of infection, the human iN cells were inoculated with RH-RFP tachyzoites at an MOI of 1, 2, 3, 5, or 10 (parasite:cell::1, 2, 3, 5, or 10:1) in neuronal medium containing BDNF (10 ng/ml, 248-BD, R&D Systems), GDNF (2 ng/ml, 21-GD, R&D Systems), NT3 (10 ng/ml, 267-N3, R&D Systems), and db-cAMP (200 mM, D0627, Sigma). Tachyzoites were added on culture day 16 together with the half media change. Inoculated cells were maintained in culture for up to 5 more days at 37 °C in a 5% CO2 incubator. Since iN cells showed almost no cysts with lower MOIs or shorter incubation times, quantitative measurement was conducted in cells with 10 MOI at 5 days after infection (see below).
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