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5 protocols using purine

1

Chromatographic Purification and Mass Spectrometry

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A mixture of hexane and ethyl acetate was used for column preparation and fractionation. Silica gel (SiO2) and normal phase thin layer chromatography plate were obtained from Merck, Germany. Developed TLCs were visualized using 5 per cent molybdophosphoric acid in ethanol was purchased from Nacalai, Japan. Formalin (37 per cent aqueous formaldehyde solution) was bought from Sigma, Leica, Microsystem (Darmstadt, Germany), Methanol (HPLC grade) was purchased from Merck (Darmstadt, Germany). LCMS-grade acetonitrile was obtained from J. T. Baker (Philipsburg, NJ, USA). Polyvinylidene fluoride (PVDF) syringe filters (0.22 µm pore size and 13 mm diameter) were bought from Merck (Darmstadt, Germany). Deionized water was acquired via a Milli-Q system (Merck, Darmstadt, Germany) at a resistivity of >18.2 MΩ·cm. Reference mass solution containing 5.0 mM of purine and 2.5 mM of Hexakis [1H,1H,3H-tetrafluoropropoxy] phosphazine, was procured from Agilent Technologies (Santa Clara, CA, USA). LCMS-grade formic acid (HCOOC) was acquired from Fisher Scientific (Fair Lawn, NJ, USA).
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2

LC-MS Metabolite Profiling Protocol

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Acetonitrile, isopropanol, methanol (all LC-MS grade) as well as chloroform (HPLC grade), and ammonium formate (≥95% puriss.) were purchased from Carl Roth GmbH (Karlsruhe, Germany). Acetic acid (≥99.5% p.a.) was bought from Merck KGaA (Darmstadt, Germany). Ultrapure water (18 MΩ cm) was obtained from a millipore water purification system (Direct-Q 3 UV-R system, Merck KGaA, Darmstadt, Germany). Hexakis(1H,1H,3H-perfluoropropoxy)phosphazene, purine and LC/MS calibration standard for ESI-TOF were purchased from Agilent Technologies (Santa Clara, CA, USA). Hesperetin reference standard was obtained from Sigma-Aldrich (Steinheim, Germany), blumeatin reference standard from Cayman Chemical (Ann Arbor, MI, USA) and divanillin reference standard from Sigma-Aldrich.
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3

Analytical Reagents and Standards

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Ultrapure water was obtained by purifying demineralized water in a Direct-Q 3 UV-R system (Merck, Millipore, Darmstadt, Germany). LC-MS-grade acetonitrile, methanol, ammonium formate, and HPLC-grade chloroform were purchased from Carl Roth GmbH and Co. KG (Karlsruhe, Germany). LC-MS-grade isopropanol was from Merck KgaA (Darmstadt, Germany). LC-MS tuning mix and hexamethoxyphosphazine, used as tuning standards, as well as hexakis(1H,1H,3H-tetrafluoropropoxy)phosphazine, and purine, used as lock masses, were purchased from Agilent Technologies (City of Santa Clara, CA, USA). Acetic acid, ethanol, sodium carbonate, disodium hydrogen phosphate, sodium chloride, potassium chloride, and potassium dihydrogen phosphate (all analytical-grade) were from Carl Roth GmbH and Co. KG (Karlsruhe, Germany). 2,2’-Azino-bis-(3-ethylbenzothiazoline-6-sulfonic acid) diammonium salt (ABTS), fluorescein, and trolox (all analytical-grade) were from Sigma-Aldrich Chemie GmbH (Deisenhofen, Germany). 2,2’-Azobis(2-methylpropionamidine) dihydrochloride (AAPH), potassium peroxodisulphate, and gallic acid (both of analytical-grade) were purchased from Fisher Scientific GmbH (Schwerte, Germany). Folin-Ciocalteu phenol reagent (analytical-grade) was obtained from Merck KgaA (Darmstadt, Germany). Acetone (analytical-grade) was obtained from VWR International LLC (Fontenay-sous-Bois, France).
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4

LC-MS Analysis of Metabolites

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The LC-MS analysis
was performed
on an Agilent 6350 QTOF mass spectrometer connected to an Agilent
1260 HPLC system (Agilent Technologies). The injection was performed
using an injection volume of 2 μL with a flow rate of 0.250
mL/min (50:50 acetonitrile/ultrapure water). The ionization was done
using a dual electrospray in positive ion mode. The instrumental parameters
were set as follows: capillary voltage, 3500 V; source temperature,
300 °C; drying gas, 11 L/min; nebulizer pressure, 25 psi; fragmentor
and skimmer voltages, 150 and 65 V, respectively. Data was acquired
(2 Hz) in profile mode using the software MassHunterWorkstation (Agilent
Technologies). The spectra were acquired over a mass-to-charge (m/z) range of 120–1100. Reference
mass correction on each sample was performed with a continuous infusion
of purine (m/z 121.0509) and hexakis(1H,1H,3H-tetrafluoropropoxy)
phosphazine (m/z 922.0098; Agilent
Technologies). The mass accuracy of the instrument using external
calibration was specified to be ≤3 ppm.
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5

UHPLC-DAD-MS/MS Analysis of Seawater

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Liquid chromatography mass spectrometry (LC-MS) grade H2O, acetonitrile (ACN) and formic acid for UHPLC-DAD-MS/MS analysis and HPLC grade methanol (MeOH), reagent grade diethyl ether, hydrochloric acid (HCl, 37%), and NaCl used for sample preparation were all purchased from VWR Chemicals (Oslo, Norway). Milli-Q H2O (Merck; Darmstadt, Germany) was used in sample and buffer preparation. Purine and HP-0921, Agilent part number: G1969-85003, were used as internal standards for MS spectra calibration, purchased from Matriks AS (Oslo, Norway). In this study, calcium and magnesium (Ca2+/Mg2+) free seawater (CMFSW)58 (link) and calcium and magnesium free modified anticoagulant buffer containing 462 mM NaCl, 10.7 mM KCl, 7 mM Na2SO4, 2.1 mM NaHCO3, and 20 mM EGTA (CMFSW-E), pH 7.859 (link) were used.
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