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5 protocols using ckx41 microscope

1

Chondrocyte Proliferation on ECM Coatings

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Chondrocytes were seeded in 6-well culture plates (TCP), some of which were coated with hBMSC-ECM, at a density of 2,000 cells/cm2, and cultured with fresh chondrocyte growth medium for up to 10 days. Medium was changed every 2–3 days. Cell morphology at different time points on different substrates was captured using an Olympus CKX 41 microscope equipped with a Leica camera, using LAS V4.9 software. The groups were denoted as ECM and TCP, respectively. Cell proliferation rate of chondrocytes growing on different substrates was analyzed with MTS assay (Promega, Madison, WI, USA) over a period of 10 days, as cells growing on ECM reach confluence after 7 days and those on TCP after 10 days. Briefly, at day 1, 2, 3, 4, 5, 6, 7 for ECM group and day 1, 3, 5, 7, 9, 10 for TCP group, 3 ml of diluted MTS solution was added to each of the three wells of cultures of ECM and TCP groups. After incubation in 37°C for 2h, a 200 µl aliquot of the MTS solution was aspirated from each well and transferred to a 96-well plate for measurement of absorbance at 492 using a plate reader (Biotek Synergy HT, Winooski, VT, USA). Corresponding cell numbers were calculated based on a standard curve calibrated using a set of cultures of known cell numbers.
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2

Histological Analysis of Cartilage Tissue

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Following fixation, the samples were washed with PBS (Life Technologies), decalcified for 4 days in Versenate EDTA solution (American Master Tech). Processed samples were then taken through a sucrose gradient (10, 20, 30%), embedded in OCT compound (Tissue-Tek), sectioned (16 µm thick) on a cryotome (Leica), and mounted on glass slides (n = 4 section per sample). Antigen retrieval was performed with 1 mg/ml chondroitinase (Sigma-Aldrich) and 5 mg/ml hyaluronidase (Sigma-Aldrich) for 30 min at 37°C. Nonspecific binding was suppressed with 1% horse serum (Vector Labs) in PBS for 45 min. Slides were then washed with 0.1% Triton X-100/TBS, blocked in 1% BSA, incubated with primary antibodies against collagen type II (Col2) (Abcam), myosin heavy chain (MHC) (Developmental Studies Hybridoma Bank), and/or proliferating cell nuclear antigen (PCNA) (Abcam) overnight at 4°C, and incubated with fluorescently labeled secondary antibodies (Invitrogen) for 1 h at room temperature. Samples were counterstained with DAPI (Invitrogen) and imaged with an Olympus CKX41 microscope outfitted with a Leica DFC 3200 camera.
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3

Lizard Tail Regeneration Kinetics

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Lizards tail samples were collected after 0, 3, 7, 14, or 21 days following original tail amputation. Samples were fixed overnight in 4% paraformaldehyde, decalcified for 1 week in 10% EDTA (pH 7.4), equilibrated to 30% sucrose, embedded in optimal cutting temperature compound (OCT, Tissue-Tek), sectioned at 7 or 20 μm thickness, mounted on glass slides, and stained with 4′,6-diamidino-2-phenylindole (DAPI). For labeling of proliferating cell populations with 5-ethynyl-2’-deoxyuridine (EdU) (ThermoFisher Scientific), animals received IP injections of EdU (50 mg/kg) four hours prior to sample collection. Samples were cryosectioned and stained according to the manufacturer’s instructions. Images were captured with an Olympus CKX41 microscope outfitted with a Leica DFC 3200 camera. To measure phagocyte levels in vivo, histology samples were collected from lizards treated with DiI liposomes and imaged with a Keyence BZ-X800 microscope as 16 μm-thick Z-stacks, and the areas of DiI signal were quantified.
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Histochemical Analysis of Calcification

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Hematoxylin and Eosin (H&E) staining was performed according to routine Harris H&E protocol. For alizarin red staining, slides were stained with alizarin red solution (Alfa Aesar, Haverhill, MA, USA) for 45 s. The extent of calcification was evaluated by the ratio (%) of the calcium staining area to the total area, which could be calculated with the Image J version 1.5.0 software (National Institutes of Health). There were totally four region of interest every group and blinding was not performed. For Immunofluorescence (IF) staining, sections were blocked in 10% bovine serum albumin for 30 min and then incubated overnight at 4°C with mixed primary antibodies against ALP (ab83250, Abcam), OSX (ab22552, Abcam) and BMP-7 (ab56023, Abcam). Sections were incubated with fluorescein isothiocyanate-conjugated secondary antibody (ab150077, Abcam) for 1 h, then mounted with 4′, 6-diamidino-2-phenylindole (DAPI) on second day. The images were taken by an Olympus CKX41 microscope with a Leica DFC 3200 camera.
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5

Neuritic Differentiation and Viability

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The degree of differentiation was evaluated based on the length of neuritic processes in different directions and at different time intervals (16, 24, 48, 72 , and 120 h) using an Olympus CKX 41 microscope equipped with a Leica DFC 420 camera. Electronic images were further processed using Adobe Photoshop CS2.
For each treatment, 10 randomly selected fields from three independent preparations were analyzed.
While small and spherical in their undifferentiated state, morphologically transformed N1E-115 cells are typically 40 mm or larger and extend processes which often span several hundred micrometer. The neurite length was evaluated with ImageJ software for Windows (NIH, Bethesda, MD) and was reported as arbitrary units. Only neuritic processes that were longer than two times the diameter of the cell were considered. XTT assay Cell viability was detected by the XTT assay following manufacturer instructions (Cell Signalling Technology; Boston, MA). This assay detects a formazan dye produced from XTT conversion by mitochondrial enzymes. 5 Â 10 3 cells were plated in 96 well dishes. Cells were treated with 2% DMSO in presence and in absence of 1 mM simvastatin for 120 h using ET-OH as control.
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