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E coli bl21

Manufactured by Takara Bio
Sourced in United States, China

E. coli BL21 is a bacterial strain commonly used in molecular biology and biotechnology laboratories. It is a non-pathogenic strain of Escherichia coli that is optimized for protein expression. E. coli BL21 is designed to facilitate the production of recombinant proteins in a controlled and efficient manner.

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6 protocols using e coli bl21

1

GST Pull-Down Assay for Protein Interaction

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The GST alone and GST fusion protein were expressed in E. coli BL21 (Takara), and purified by Pierce GST Spin Purification Kit (Thermo scientific). GST pull-down assay was performed using a Pierce GST Protein Interaction Pull-Down Kit (Thermo scientific). The purified GST-tagged fusion protein (BAIT) was immobilized on the Pierce Spin Column. MCF-7 cells were lysed in pull-down lysis buffer containing DNase (Takara). The supernatant was loaded onto the Pierce Spin Column, and then incubated at 4°C for 2 hour with gentle agitation. The column was centrifuged at 1250 × g for 1 minute and the flow through was discarded. Then the column was washed five times using wash solution. Elution buffer was added to the column followed by 5-min incubation with gentle agitation. After that, the column was centrifuged at 1250 × g for 1 minute, and the eluent was subjected to Western blot assay.
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2

Purification of Recombinant Proteins from E. coli

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Synthetic recombinant plasmids were introduced into E. coli BL21 (Takara Bio). Transformed BL21 cells were cultivated with a small amount of 2×YT broth (containing 50 μg/mL ampicillin) in a shaker at 200 rpm and 37 °C and then inoculated into a large bottle of 2×YT at a dilution of 1:100. E. coli was grown at 160 rpm and 19 °C when the optical density at 600 nm (OD600) reached 0.4–0.5. Then, 300 μM isopropyl-β-d-thiogalactopyranoside (Nacalai Tesque) was added to induce protein synthesis with overnight incubation at 160 rpm and 19 °C. Following centrifugation, bacteria were collected and suspended in lysis buffer (1 M NaCl, 50 mM Tris pH 8.0, 1% Triton X) containing protease inhibitor cocktails (Merck KGaA, Darmstadt, Germany) and sonicated. After centrifugation at 15,000 rpm for 10 min, the supernatants were collected and filtered through a 0.45 μm syringe filter, and the proteins were purified on a GSTrap FF column using an AKTA start liquid chromatography system (Cytiva, Tokyo, Japan) following standard protocols. Eluted proteins were fractionized by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and stained for visualization with Coomassie brilliant blue G-250 (Bio-Safe CBB G-250 Stain, Nacalai Tesque).
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3

Phage Display Protein Expression

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Phagemid vector pCANTAB 5E and Helper phage M13KO7 were obtained from GE Healthcare (NJ, USA), Escherichia coli TG1, E. coli BL21, prokaryotic vector pET28a, and HepG2 cells from the Xinjiang Key Laboratory of Biological Resources and Genetic Engineering, Xinjiang University (Urumqi, Xinjiang, China), Taq DNA polymerase and deoxynucleotides (dNTPs) from Takara (Dalian, China), DAB (3, 3ʹ-diaminobenzidine), ampicillin, kanamycin sulfate, and isopropyl-D- thiogalactopyranoside (IPTG) from Solarbio Biotechnology (Beijing, China), anti-His and horseradish peroxidase (HRP)-conjugated anti-his monoclonal antibodies (mAbs) from Beyotime Biotechnology (Shanghai, China), anti-human GPC3 mAbs from ACRO Biosystems (Beijing, China), and Anti-6×His fluorescein isothiocyanate (FITC) from abcam (Cambridge, UK).
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4

GST Pulldown Assay for Protein Interactions

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The GST pulldown assay was performed as previously described68 (link). GST or GST-ELF5 fusion protein was expressed in E. coli BL21 (Takara, Tokyo, JAPAN) and induced with 0.1 mM Isopropyl β-D-Thiogalactoside (IPTG) at 28 °C for 6 h. Then GST or GST-ELF5 fusion protein purified with Pierce GST Spin Purification Kit (Thermo Scientific, Massachusetts, USA). The purified proteins were immobilized on the Pierce Spin Column and then incubated with HEK293T cells lysate with overexpressing p300 or SIRT6.
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5

GST-Fused Protein Purification

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A recombinant technique was used to fuse the probe protein with GST. The recombinant plasmid was transformed into E.coli BL21 (#9216, Takara, Dalian, China). Cultured bacteria were broken by ultrasonication for 30 min. Recombinant protein was incubated with total proteins extracted from the MGC‐803 cells then the complex was purified using Glutathione Purification Resin (Beyotime Biotechnology, Shanghai, China) at 4 °C overnight in rotation. After eluting, protein interactions were examined via western blot analysis.
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6

Cloning, Expression, and Antibody Production of GlPGM1 and GlPGM3 from G. lemaneiformis

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The ORFs of GlPGM1 and GlPGM3 were amplified, as mentioned above, and then cloned into the pMD18-T vector (Takara, Dalian, China) for sequencing (Youkang Biotech, Hangzhou, China). The GlPGM1 and GlPGM3 from the pMD18-T vector were then cut, using restriction endonuclease and cloned into expression vector pET-28a (+) (Takara, Dalian, China) to obtain pET-28a-GlPGM1 and pET-28a-GlPGM3 recombinant strains, respectively. The constructed plasmids were transformed into the expression strain E. coli BL21 (Takara, Dalian, China). The recombinant strains of GlPGM1and GlPGM3 were incubated and induced with 1mM isopropyl-β-D-thiogalactopyranoside (IPTG) for 3–5 h at 28 °C. The overexpressed proteins GlPGM1and GlPGM3 were purified and checked by 12.5% SDS-PAGE. The E. coli with recombinant pET-28a without IPTG was used as the negative control.
The GlPGM1 and GlPGM3 polyclonal antibodies were made by Hangzhou Aiting Biological Technology Co., Ltd. (Hangzhou, China). The purified proteins, GlPGM1 and GlPGM3, were used as antigens to immunize rabbits for the production of the polyclonal antiserum. A Western blot analysis with the antibodies was conducted to check the expression of GlPGM1 and GlPGM3 from G. lemaneiformis (Figure S7, Supplementary Materials).
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