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Fdi 6

Manufactured by Merck Group
Sourced in United States

The FDI-6 is a laboratory equipment designed for flow cytometry analysis. It is a compact and reliable instrument that measures the physical and chemical characteristics of particles or cells suspended in a fluid as they pass through a beam of light. The FDI-6 provides accurate and reproducible data on various cellular parameters, including size, granularity, and fluorescence intensity.

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6 protocols using fdi 6

1

FoxM1-DBD Binding Assay Protocol

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CDI (CAT#, NO75-0015) was obtained from ChemDiv (San Diego, CA, USA). The dsDNA binding domain of FoxM1 (FoxM1-DBD) tagged with His×6 was supplied by Dr. Shin SJ (Yonsei University College of Medicine, Seoul, Korea). Streptavidin-XL-665 and anti-His×6 cryptate were purchased from Cisbio (Codolet, France). Biotinylated oligomers (sense: 5′-Biotin-TEG-AAA CAA ACA AAC AAT C-3′ and antisense: 5′-GAT TGT TTG TTT GTT T-3′) were obtained from Bioneer (Daejeon, South Korea). FDI-6, which was used as a reference, and all other reagents, including MgCl2, EDTA, glycerol, DTT, NaCl, and Brij-35, were obtained from Sigma-Aldrich (St. Louis, MO, USA).
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2

Cytotoxicity assay of FDI-6 compound

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The cells were seeded in 96-well culture plates as 5000 cells/well in 100 µL completed DMEM media, and were incubated at 37 °C overnight before adding FDI-6 (SML1392, Sigma Aldrich, Singapore) in varied concentrations. After being incubated further for 3 days, the cells were washed with PBS, fixed with 10% trichloroacetic acid for 1 h, and then washed again with PBS. Then, 1% SRB solution was added to the 50 µL/wells for staining. The samples were incubated for 30 min at room temperature and rinsed three times with 1% acetic acid afterward. The culture plates were dried at room temperature overnight. The stained samples were dissolved in 50 µL of 10 mM Tris base solution and the absorbance was measured at 560 nm. The inhibitory concentration 50% (IC50) was determined by using the IC50 calculator tool of the AAT Bioquest webpage [55 ].
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3

Optimized Culturing and Transfection for Meningioma Research

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M3, M6, M8, M10, and M12 primary meningioma cells were cultured in Neurobasal Medium (Thermo Fisher Scientific) supplemented with EGF and FGF (Sigma-Aldrich), B27 and N2 (Thermo Fisher Scientific), glutamine, and 5% fetal bovine serum (Table S8). BEN-MEN-1 and HBL-52 primary meningioma cells were cultured in Dulbecco’s modified Eagle’s medium (Thermo Fisher Scientific) supplemented with 10% newborn calf serum and glutamine (Mei et al., 2017 (link)). FOXM1 and CTNNB1 constructs in the pCMV6-Entry vector were obtained from OriGene (Rockville, MD) and transfected using Lipofectamine LTX with Plus Reagent (Thermo Fisher Scientific). Mission shRNAs in the pLKO.1 vector were obtained from Sigma-Aldrich and transduced using lentivirus particles (Table S8). FDI-6 was obtained from Sigma-Aldrich and reconstituted in DMSO. All experiments were performed 72 hr after transfection, transduction, or initiation of pharmacologic treatment. Proliferation assays were performed using the Cell Titer 96 Non-Radioactive Cell Proliferation Assay Kit and a GloMax Discovery Multimode Microplate Reader (Promega).
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4

Spectroscopic Characterization of NB Compounds

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Details on the preparation and spectroscopic characterization of NB compounds were previously described [29 (link)]. NB-73, NB-115, Thiostrepton (Sigma-Aldrich #598226), FDI-6 (Sigma-Aldrich #SML1392), RCM-1 (R&D Systems, Minneapolis, MN, USA, #6845), N-phenylphenanthren-9-amine (Sigma-Aldrich, St. Louis, MO, USA, #761966), MG132 (Sigma-Aldrich #474790), Q-VD-OPh (R&D Systems #OPH001), and olaparib (Selleck Chemicals, Houston, TX, USA, #S1060) were dissolved in DMSO. NB-55 and monensin (R&D Systems #5223) were dissolved in ethanol. Carboplatin (Sigma-Aldrich #C2538) was dissolved in water. All compounds were stored at -20 °C.
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5

Optimized Culturing and Transfection for Meningioma Research

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M3, M6, M8, M10, and M12 primary meningioma cells were cultured in Neurobasal Medium (Thermo Fisher Scientific) supplemented with EGF and FGF (Sigma-Aldrich), B27 and N2 (Thermo Fisher Scientific), glutamine, and 5% fetal bovine serum (Table S8). BEN-MEN-1 and HBL-52 primary meningioma cells were cultured in Dulbecco’s modified Eagle’s medium (Thermo Fisher Scientific) supplemented with 10% newborn calf serum and glutamine (Mei et al., 2017 (link)). FOXM1 and CTNNB1 constructs in the pCMV6-Entry vector were obtained from OriGene (Rockville, MD) and transfected using Lipofectamine LTX with Plus Reagent (Thermo Fisher Scientific). Mission shRNAs in the pLKO.1 vector were obtained from Sigma-Aldrich and transduced using lentivirus particles (Table S8). FDI-6 was obtained from Sigma-Aldrich and reconstituted in DMSO. All experiments were performed 72 hr after transfection, transduction, or initiation of pharmacologic treatment. Proliferation assays were performed using the Cell Titer 96 Non-Radioactive Cell Proliferation Assay Kit and a GloMax Discovery Multimode Microplate Reader (Promega).
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6

Dissolution and Combination of Anticancer Agents

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Cisplatin (PubChem CID: 84691) was obtained from Choongwae Pharm. C. (Seoul, Korea) and dissolved in distilled water at 1 mg/mL. FDI-6 (PubChem CID: 329825840) was provided by Sigma (St. Louis, MO, USA) and dissolved in DMSO at 20 mM. The stock solutions were stored in aliquots at −20 °C until use. Paclitaxel (PubChem CID: 36314) was purchased from Hanmi Pharm. Co., Ltd. (Seoul, Korea), and it was used as an injection; the solvent is known as polyoxyl 35 castor oil and anhydrous alcohol. When cisplatin and paclitaxel were mixed, they were directly added to the cell culture media.
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