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Azure 300

Manufactured by Azure Biosystems
Sourced in United States

The Azure 300 is a bench-top imaging system designed for a variety of life science applications. It features high-resolution CCD imaging, optimized for fluorescence, chemiluminescence, and colorimetric detection. The Azure 300 supports a range of sample types and can accommodate multiple imaging modalities.

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15 protocols using azure 300

1

FGF1 Immunoprecipitation from Incisor Mesenchyme

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Proximal incisor mesenchyme from wild-type mice was collected and lysed in RIPA buffer. After pre-clearing using protein G Sepharose (GE Healthcare, 10280243), anti-FGF1 antibody (Abcam, ab207321), or Rabbit pre-immune IgG (Cell Signaling Technology, 3900) was added to the protein extract and rotated overnight at 4 °C. Then, protein G Sepharose beads were added and rotated at 4 °C for 2 h. Immune complexes were washed three times. Whole protein and immunoprecipitated protein were loaded and separated with 4–15% SDS–PAGE gels and transferred on PVDF membranes. After blocking with 5% non-fat dry milk, membranes were probed with anti-FGF1 (Abcam ab207321) or anti-FGFR1 (Cell Signaling Technology, 9740) antibodies, and signals were detected using Azure 300 (Azure Biosystems).
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2

Protein Extraction and Western Blot Analysis

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For western blots, the proximal region of incisor mesenchyme and cultured cells were lysed by RIPA buffer (Cell Signaling, 9806) supplemented with Protease inhibitor (ThermoFisher Scientific, A32959) for 30 min on ice. Protein extracts were loaded in 4%–15% precast polyacrylamide gel (Bio-Rad,456–1084), transferred to 0.45 μm PVDF membrane, blocked with 5% milk (Bio-Rad,170–6404) for 1h, and incubated with primary antibody (Table S1) at 4°C overnight. After incubation with HRP-conjugated secondary antibody for 1 h at room temperature, signals were detected using Azure 300 (Azure biosystems) and images were taken with cSeries Capture Software.
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3

Arid1a Regulation in Dental Progenitor Cells

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At PN7.5,4 days after tamoxifen induction, the apical thirds of first mandibular molars from Gli1-CreER;Arid1afl/fl mice and littermate controls were cut into pieces and homogenized in RIPA buffer (Cell Signaling, 9806s) supplemented with protease inhibitor (Thermo Fisher Scientific, A32959). Western blot was performed per standard protocol and signals were detected using Azure 300 (Azure biosystems). The primary antibodies are listed in Table S1. HRP-conjugated secondary antibodies (R&D, HAF007, HAF008, and HAF016) were used in the study. For co-immunoprecipitation (co-IP), DPCs cultured in vitro were harvested and lysed in lysis buffer [50 mM Tris-HCl (pH 7.5), 150 mM NaCl, 2 mM EDTA (pH 8.0), 1mM PMSF, 1% NP-40, 5% glycerol]. Then lysates were subjected to immunoprecipitation with anti-Arid1a antibody (Abcam, ab182561) or normal Rabbit IgG (Cell Signaling Technology, 2729) and protein A-Sepharose (VWR, CA97067-898). Immune complexes were washed and subjected to immunoblotting with anti-Arid1a (Santa Cruz, sc-32761) or anti-Plagl1 (Santa Cruz, sc-166944) antibodies.
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4

Western Blot Analysis of DEA Treatment

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MCF-7 and 4T1 cells were seeded in 10 cm plates at a starting density of 106 cells/plate, were cultured overnight, and then were treated with 0, 5, or 10 µM DEA for 24 h. The cells were harvested in a chilled lysis buffer containing 0.5 mM sodium–metavanadate, 1 mM ethylenediamine–tetraacetic acid, and protease and phosphatase inhibitor cocktails (1:200). After boiling, the cell lysates were subjected to 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis; then, the proteins were transferred to nitrocellulose membranes. After blocking the membranes in 5% bovine serum albumin (BSA) for 1.5 h at room temperature, they were exposed to primary antibodies diluted in blocking solution at 4 °C overnight. Appropriate horseradish peroxidase-conjugated secondary antibodies were used at a dilution of 1:5000 (anti-mouse and anti-rabbit IgGs; Sigma-Aldrich, St. Louis, MI, USA). Chemiluminescence generated by applying the WesternBright ECL HRP substrate (Advansta, San Jose, CA, USA) was measured using an Azure 300 (Azure Biosystems, Dublin, CA, USA) high-resolution imaging system. Pixel volumes of the bands were determined using ImageJ software. For membrane stripping and re-probing, the membranes were washed in a stripping buffer containing 0.1 M glycine and 5 M MgCl2 (pH 2.8) for 30 min at room temperature. After washing and blocking, the membranes were re-probed.
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5

Western Blot Analysis Protocol

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For WB analysis, total cells were detached by scraping, collected by centrifugation, and lysed in RIPA buffer [50 mMTris·HCl (pH 7.5), 150 mm NaCl, 1% Nonidet P-40, 0.5% sodium deoxycholate (NaDoc), 0.1% SDS] containing proteases and phosphatase inhibitors (Roche). Protein concentrations were determined using the DC Protein assay (Bio-Rad Laboratories). Cell lysates were resolved on MiniPROTEAN TGX gels and transferred to nitrocellulose membranes (Bio-Rad Laboratories), followed by WB using indicated primary Abs and revealed by using horseradish peroxidase-conjugated goat anti-rabbit or anti-mouse Abs (Bio-Rad Laboratories). Proteins were visualized by chemiluminescence (Clarity Western ECL Substrates, Bio-Rad Laboratories) by using Azure 300 (Azure Biosystems) or by ChemiDoc Imaging System and Image Lab Software (Biorad Laboratories). Quantification analyses were performed using ImageJ and reflected the relative amounts as a ratio of each protein band relative to the loading control of the lane.
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6

Protein Extraction and Western Blot Analysis

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Cells were harvested after trypsinization and quenching with medium, washed once with PBS, and lysed with RIPA buffer (Thermo Scientific) supplemented with protease and phosphatase inhibitors (Thermo Scientific). The cell lysates were sonicated using a Branson Sonifier 450 until the viscosity of lysates disappears and centrifuged at 14,000 rpm (17,968 xg) for 5 min. The supernatants were subjected to the DC Protein Assay Kit (BioRad Laboratories). SDS-PAGE samples were prepared by mixing the supernatants and 4x Laemmli buffer/10% beta-mercaptoethanol (BioRad Laboratories) and followed by boiling at 95°C for 5 min. Equivalent amounts of protein were resolved by SDS-PAGE and then transferred to a nitrocellulose membrane using the Trans-Blot Turbo Transfer system (BioRad Laboratories). Membranes were stained with Ponceaus S, blocked with 5% milk/TBS-T (Tris-Buffered Saline/0.1% Tween 20) for 30–60 min, and incubated with primary antibodies, followed by secondary HRP-conjugated antibodies. Blots were developed using a chemiluminescent substrate (SuperSignal West Pico PLUS or SuperSignal West Femto Maximum Sensitivity Substrate; Thermo Scientific) and imaged with an Azure 300 (azure biosystems).
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7

Western Blot Analysis of B16F10 Cells

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B16F10 cells were seeded in 10 cm plates at 106 cells/plate and treated as described above for the cell viability assay. The cells were harvested at intervals in chilled lysis buffer containing 0.5 mM of sodium-metavanadate, 1 mM of EDTA, and protease inhibitor cocktail (1:200). The cell lysates were boiled and subjected to 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis before being transferred to nitrocellulose membranes. The membranes were blocked in 5% low-fat milk for 1.5 h at room temperature, and then exposed to primary antibodies at 4 °C overnight in blocking solution. Appropriate horseradish peroxidase–conjugated secondary antibodies were used at a dilution of 1:5000. Signals were visualized by using enhanced chemiluminescence and captured on X-ray film. The films were scanned, and the pixel densities of the bands were determined using the NIH ImageJ software. Alternatively, chemiluminescence was measured on an Azure 300 (Azure Biosystems) imaging system that digitized the bands’ chemiluminescence intensities using its inbuilt software. For stripping and reprobing, the membranes were washed in stripping buffer (0.1 M glycine, 5 M MgCl2, pH 2.8) for 1 h at room temperature. After washing and blocking, the membranes were incubated with primary antibodies against non-phosphorylated or loading control proteins. These experiments were repeated three times.
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8

Western Blot Analysis of Protein Samples

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For WB analysis, cells were detached by scraping, collected by centrifugation, and lysed in RIPA buffer [50 mMTris·HCL (pH 7.5), 150 mm NaCl, 1% Nonidet P-40, 0.5% sodium deoxycholate (NaDoc), 0.1% SDS] containing proteases and phosphatase inhibitors (Roche). Protein concentrations were determined using the DC Protein assay (Bio-Rad Laboratories). Cell lysates were resolved on MiniPROTEAN TGX gels and transferred to nitrocellulose membranes (Bio-Rad Laboratories), followed by WB using the primary antibodies. Primary antibodies were revealed using horseradish peroxidase-conjugated goat anti-rabbit or anti-mouse Abs (Bio-Rad Laboratories). Proteins were visualized by chemiluminescence (Clarity Western ECL Substrates, Bio-Rad Laboratories) by using Azure 300 (Azure Biosystems). Quantification analyses were performed by ImageJ (https://imagej.nih.gov/ij/), a Java-based freeware, and reflects the relative amounts as a ratio of each protein band relative to the lane’s loading control.
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9

Western Blot Analysis of Osteogenic Markers

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Rapid-immunoprecipitation assay (RIPA) buffer, blocking solution, and protease inhibitor were purchased from GenDepot. Anti-RUNX2 and -GAPDH antibodies were purchased from Detroit R&D (Detroit, MI). Anti-DLX5 and -PHEX were purchased from Proteintech (Rosemont, IL, USA). Anti-OCN and -OSX were purchased from Abcam (Cambridge, UK). Cell lysates were prepared from fusion bed tissue using RIPA buffer. Proteins were resolved on SDS-PAGE and transferred to 0.45 μm nitrocellulose blotting membranes (Amersham Protran, Germany). The blots were blocked using superblocking solution (Gengepot) for 1 hour at room temperature and probed with primary antibody overnight at 4°C. Blots were washed with PBST and incubated with an anti-rabbit or –mouse peroxidase-conjugated secondary antibody for 1 hour at room temperature. Signal was visualized by enhanced chemiluminescence (ECL) using Azure300 (Azure Biosystems, Dublin, CA, USA), and intensities were quantified using a computing densitometry program from Image Studio Lite (LI-COR, Lincoln, NE, USA).
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10

Western Blotting of Cell Lysates

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Cells were harvested after trypsinization and quenching with medium, washed once with PBS, and lysed with RIPA buffer (Thermo Scientific) supplemented with protease and phosphatase inhibitors (Thermo Scientific). The cell lysates were sonicated using a Branson Sonifier 450 until the viscosity of lysates disappears and centrifuged at 14,000 rpm (17,968 xg) for 5 mins. The supernatants were subjected to the DC Protein Assay Kit (BioRad Laboratories). SDS-PAGE samples were prepared by mixing the supernatants and 4x Laemmli buffer/10% beta-mercaptoethanol (BioRad Laboratories) and followed by boiling at 95°C for 5 mins. Equivalent amounts of protein were resolved by SDS-PAGE and then transferred to a nitrocellulose membrane using the Trans-Blot Turbo Transfer system (BioRad Laboratories). Membranes were stained with Ponceaus S, blocked with 5% milk/TBS-T (Tris Buffered Saline/0.1% Tween-20) for 30–60 mins, and incubated with primary antibodies, followed by secondary HRP-conjugated antibodies. Blots were developed using a chemiluminescent substrate (SuperSignal West Pico PLUS or SuperSignal West Femto Maximum Sensitivity Substrate; Thermo Scientific) and imaged with an Azure 300 (azure biosystems).
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