Primary antibodies used were mouse anti-H3K27me3 (1:1000; ab6002, Abcam, Paris, France), rabbit anti-H3K27me2 (1:500; ab24684, Abcam), rabbit anti-H3K27me1 (1:500; ab84932, Abcam), rabbit anti-H2AK119ub (1:2000; DC27C4; Cell Signaling), rabbit anti-H3K9me3 (1:1000; AB8898; Millipore-Sigma Aldrich S.a.r.l., Saint-Quentin-Follavier, France), rabbit anti-H4K20me3 (1:1000; ab9053; Abcam), rabbit anti-H3K27ac (1:1000; ab4729; Abcam) and rabbit anti-H3 (1:5000; ab1791, Abcam). The secondary antibodies were peroxidase conjugated anti-mouse antibody (1:10,000; 115-035-003, Jackson ImmunoResearch, Ely, UK) and peroxidase conjugated anti-rabbit antibody (1:10,000; 711-035-152, Jackson ImmunoResearch).
Ab9053
Ab9053 is a monoclonal antibody that recognizes the protein PPAR-gamma. It is suitable for use in various applications, including ELISA, immunohistochemistry, and Western blotting.
Lab products found in correlation
19 protocols using ab9053
Histone Extraction and Western Blot Analysis
Primary antibodies used were mouse anti-H3K27me3 (1:1000; ab6002, Abcam, Paris, France), rabbit anti-H3K27me2 (1:500; ab24684, Abcam), rabbit anti-H3K27me1 (1:500; ab84932, Abcam), rabbit anti-H2AK119ub (1:2000; DC27C4; Cell Signaling), rabbit anti-H3K9me3 (1:1000; AB8898; Millipore-Sigma Aldrich S.a.r.l., Saint-Quentin-Follavier, France), rabbit anti-H4K20me3 (1:1000; ab9053; Abcam), rabbit anti-H3K27ac (1:1000; ab4729; Abcam) and rabbit anti-H3 (1:5000; ab1791, Abcam). The secondary antibodies were peroxidase conjugated anti-mouse antibody (1:10,000; 115-035-003, Jackson ImmunoResearch, Ely, UK) and peroxidase conjugated anti-rabbit antibody (1:10,000; 711-035-152, Jackson ImmunoResearch).
Antibody-based Protein Quantification in Cellular Studies
Chromatin Isolation and Antibody Binding
Histone Modifications Analysis by Western Blot
Chromatin Organization Imaging and Analysis
Leica TCS SP5 or Zeiss LSM 710 confocal laser scanning microscope as described previously
(Müller et al, 2009 (link); Erdel et
al, 2010 (link)) and in the
Immunofluorescence was conducted with primary anti-H3K9me3 (Millipore, Abcam ab8898),
anti-HP1α (Euromedex, 2HP-1H5-AS), anti-HP1β (Euromedex, 1MOD-1A9-AS),
anti-HP1γ (Euromedex, 2MOD-1G6-AS) or anti-H4K20me3 (Abcam, ab9053) antibodies and a
secondary goat anti-rabbit/mouse Alexa 568 antibody or anti-rabbit/mouse Alexa 633 antibody
(Invitrogen, Molecular Probes).
Protein enrichments and H3K9 trimethylation levels were measured from high-resolution microscopy
images using the ImageJ software as described in the
diffusion model, a binding model or a reaction-diffusion model that incorporates both diffusion and
binding processes. The data from the model that yielded the best fit was used for further analysis
and modeling (Müller et al, 2009 (link)).
Multicolor Immunofluorescence of Chromatin Markers
Chromatin Immunoprecipitation of Telomeric DNA
Histone Modification Analysis by SDS-PAGE
Immunofluorescence Staining of Embryos
2.5). After washing three times in PBS containing 0.3% polyvinylpyrrolidone (PVP K-30; Nacalai Tesque), fixed embryos were treated with 0.5% Triton X-100
(Sigma-Aldrich) in PBS at RT for 40 min, and were blocked in PBST containing 1.5% BSA, 0.2% sodium azide, and 0.02% Tween20 (antibody dilution buffer) at RT for
1 h. Embryos were incubated with primary antibody in antibody dilution buffer at 4°C overnight, for H4K20me1 (1:3000 dilution; ab9051, Abcam, Cambridge, UK),
H4K20me3 (1:5000 dilution; ab9053, Abcam), γH2AX (1:200 dilution; AB_315794, Biolegend, San Diego, CA, USA), and FLAG (1:5000 dilution; F1804, Sigma-Aldrich)
staining. Embryos were washed three times in antibody dilution buffer, and then were incubated with appropriate secondary antibody in antibody dilution buffer
(1:500 dilution; Alexa Fluor 488-conjugated goat anti-mouse IgG or Alexa Fluor 594-conjugated goat anti-rabbit IgG, Invitrogen) at RT for 1 h. After stained
with Hoechst 33342 (Sigma-Aldrich), embryos were mounted on slides in 50% glycerol in PBS and signals were observed using a fluorescence microscopy (BX50 or
FSX100, Olympus, Tokyo, Japan). The number of analyzed embryos is given in each figure legend.
Western Blot Analysis of Chromatin Proteins
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