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Automacs cell sorter

Manufactured by Miltenyi Biotec
Sourced in Germany

The AutoMACS cell sorter is a laboratory instrument designed for the automated separation of cells. It utilizes magnetic beads coated with antibodies to target specific cell types, enabling the efficient and precise isolation of desired cell populations from complex biological samples.

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20 protocols using automacs cell sorter

1

Isolation and Purification of T Cell Subsets

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Mononuclear cells (MNCs) were separated from whole blood using Ficoll-PaqueTM PLUS (GE Healthcare). The separated MNCs were then labeled with either CD4+ or CD8+ magnetic beads (Miltenyi Biotec) and sorted by AutoMACs® cell sorter (Miltenyi Biotec) according to the manufacturer’s protocol. The purity of sorted fractions was evaluated by flow cytometry and confirmed to be >98% (FACSVerse, BD Biosciences). Alternatively, separated MNCs were sorted using FACSAria II (BD Biosciences). Genomic DNA was isolated from fresh or frozen sorted MNCs or from whole blood samples using the Genomic DNA NucleoSpin Tissue kit (Macherey-Nagel). DNA concentration and purity were measured with Qubit2.0 Fluorometer (Invitrogen) or Nanodrop (Thermo Fisher Scientific).
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2

Isolation and Characterization of Premature Infant Neutrophils

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Example 10

PMNs were isolated from ACD or EDTA anticoagulated venous blood from healthy adults, healthy term infants, and prematurely born infants (see Yost C C, et al. Blood 2009; 113 (25) 6419-27 and McInturff A M, et al., Blood. 2012; 120 (15) 3118-25) under protocols approved by the University of Utah Institutional Review Board. For the eight prematurely born infants from whom cord and peripheral blood samples were collected, cord and peripheral blood plasma and PMN preparations were obtained at five separate time points throughout the first two months of life. PMN suspensions (>96% pure) were prepared by positive immunoselection using anti-CD15-coated microbeads and an AUTO-MACS® cell sorter (MILTENYI™), and were resuspended at 2×106 cells/mL concentration in serum-free M-199 media at 370° C. in 5% CO2/95% air. Human platelets were isolated as described (see Weyrich AS, et al., J Clin Invest. 1996; 97 (6):1525-34).

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3

Isolation of CD133+ Cells from Umbilical Cord Blood

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Fresh human umbilical cord bloods (70–100 ml) were obtained from The Wexner Medical Center at The Ohio State University after IRB approval and written consent from donors. Blood samples were processed following a similar protocol earlier published [20 (link), 25 (link)–28 (link)]. In brief, the citrate phosphate dextrose-adenine 1 (CPDA-1) anti-coagulated blood was diluted with PBS and 10 ml of Ficoll-Paque plus (GE Healthcare, Piscataway, NJ) was carefully under layered. After 30 min centrifugation in a swinging bucket rotor at 14000 rpm, the upper layer was aspirated and the mononuclear cell layer was collected. Furthermore, following labeling with magnetic bead conjugated anti-CD133 (CD133) monoclonal antibody (Miltenyi Biotec Inc, Bergisch Gladbach, Germany), two cell separation cycles (with different columns) were performed using the AutoMACS cell sorter (Miltenyi Biotec) according to the manufacturer’s protocol and reagents. After separation, periodic purity of the cell product was determined by flow cytometry.
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4

Isolating Murine Immune Cell Populations

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The Institutional Animal Care and Use Committee (IACUC) at the Medical University of South Carolina approved all experimental protocols. Male and female, age-matched mice (8-12 week age range; 5 per group), on a mixed C57/129 background, were obtained for peripheral blood (PB) by cardiac puncture and primary bone marrow cells (BM) as previously described (17 (link)). PB samples were run on a Scil Vet ABC complete blood counter (CBC) to determine distribution of lymphocytes, granulocytes and monocytes (Scil Vet, Gurnee, IL). Cells (PB and BM) were immunophenotyped using makers against T cells (CD4), B cells CD45R (B220), granulocytes (Gr1) and monocytes (CD11b) and CD115 (Colony-Stimulating Factor 1 Receptor). All antibodies were obtained from Miltenyi Biotech (Auburn, CA) and attached to fluorophores. Following immuophenotyping analysis, Gr1+ granulocytes (Ly6G+) were obtained from whole BM using antibodies conjugated to magnetic beads. Osteoclast progenitors were isolated from both male and female BM cells as previously described (17 (link)). Briefly, using the AutoMACS cell sorter (Miltenyi Biotec Inc., San Diego, CA, USA), BM cells were separated by expression of integrin CD11b into CD11bhi, CD11blo and CD11b fractions, were the CD11blo/− fractions are negative for lineage markers including CD3, CD45R, Gr1, CD11c and positive for CD115.
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5

Murine Model of Graft-Versus-Host Disease

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Mice were exposed to 850 cGy total body irradiation with the use of a [137Cs] source 8 hours before HCT. Recipients were injected i.v. with either DBA/2 CD25+-cell depleted spleen cells and whole bone marrow (BM) cells or C57BL/6 whole spleen cell and T and B cell-depleted BM (TBCD-BM). CD25 depletion in the spleen, and T and B cell depletion in the BM was accomplished using biotin-conjugated anti-CD25 (spleen) and biotin-conjugated anti-CD3, anti-CD4, anti-CD8, anti-B220 and anti-CD19 mAb (BM) and anti-biotin micromagnetic beads, followed by passage through an autoMACS cell sorter (Miltenyi Biotec). The purity of depletion was >99%. The assessment and scoring of clinical cutaneous GVHD was described previously [21 , 22 , 65 (link)]. Assessment and scoring of total GVHD was as follows: hair loss (0–2), proteinuria (0–2), activity (0–2), posture (0–2) body weight loss (if no proteinuria occurred) (0–2).
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6

Isolation of Interstitial CD45+ and CD45- Cells

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Isolated interstitial cells were pelleted by centrifugation. The supernatants were aspirated and the cell pellets were resuspended in 90 μL of running buffer (0.2% FBS, 2mM EDTA in 1X PBS) per 107 cells. CD45 mouse microbeads (Miltenyi Biotec, San Diego, CA) were added at a concentration of 10 μL microbeads per 107 cells. Cells were mixed by brief vortexing and incubated for 15 minutes at 4°C. Cells were washed by adding 5 ml running buffer and centrifuged. The supernatants were aspirated and the cell pellets were resuspended in 2 mL of running buffer. Cell suspensions were passed through a 70 μm nylon mesh filters prior to separation. Interstitial CD45+ and CD45- cells were isolated using an autoMACS cell sorter (Miltenyi Biotec). Isolated CD45+ and CD45- fractions were routinely tested for purity. Both fractions demonstrated 92–95% purity and 3–5% 7AAD positive.
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7

Purification of CD138+ Cells from Multiple Myeloma Patients

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Approval for collection of all primary samples was obtained from the Institutional Review Board of Northwestern University. Patients provided written informed consent in all cases at time of enrollment in accordance with the Declaration of Helsinki. An AutoMacs cell sorter (Miltenyi Biotec) was used to purify CD138+ cells from multiple myeloma patient bone marrow aspirate as described previously (3 (link)). Normal peripheral blood mononuclear cells (PBMC) were harvested by layering whole blood over a Ficoll histopaque (Sigma) gradient and subject to standard buffy coat purification.
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8

Isolation and Purification of PMNs

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Example 10

PMNs were isolated from ACD or EDTA anticoagulated venous blood from healthy adults, healthy term infants, and prematurely born infants (see Yost C C, et al., Blood. 2009; 113 (25):6419-27 and McInturff A M, et al., Blood. 2012; 120 (15):3118-25) under protocols approved by the University of Utah Institutional Review Board. For the eight prematurely born infants from whom cord and peripheral blood samples were collected, cord and peripheral blood plasma and PMN preparations were obtained at five separate time points throughout the first two months of life. PMN suspensions (>96% pure) were prepared by positive immunoselection using anti-CD15-coated microbeads and an AUTO-MACS® cell sorter (MILTENYI™), and were resuspended at 2×106 cells/mL concentration in serum-free M-199 media at 370° C. in 5% CO2/95% air. Human platelets were isolated as described (see Weyrich A S, et al., J Clin Invest. 1996; 97 (6):1525-34).

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9

Isolation of Immune Cell Subsets

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Buffy coats from healthy blood donors were used for cell sorting. Written consent was received from blood donors and the use of peripheral blood material was approved by the Research Ethics Committee of the University of Tartu. PBMCs were isolated by density gradient centrifugation on Ficoll-Paque (GE Healthcare). Cell sorting was performed using MicroBead kits and autoMACS cell sorter from Miltenyi Biotec according to manufacturer's protocols. Plasmacytoid dendritic cells (pDC) were isolated with CD304 (BDCA-4/Neuropilin-1) MicroBead kit, B cells (B) with CD19 MicroBeads, monocytes (MO) with CD14 MicroBeads, CD4+ T cells (CD4+) with CD4 MicroBeads after monocyte depletion, and natural killer (NK) cells with CD56 MicroBeads.
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10

Isolation of Immune Cell Subsets

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Total cDC enriched for CD1c+ cDC were purified from total PBMC suspensions by immunomagnetic enrichment (purity > 90%) using the Human Myeloid DC Enrichment Kit (STEMCELL). Total T cells and CD4+ T cells were isolated using the Untouched Human T cell and CD4+ T cell kits (Invitrogen), leading to a cell suspension of purity > 95%. For some experiments, circulating naive and CXCR3+ memory CD4+ T cells were isolated from previously purified total CD4+ lymphocyte fractions using a manual EasySep Human Naive CD4+ T Cell Isolation Kit (Stemcell Technologies) or using PE-labeled anti-CXCR3 mAb (BioLegend) plus anti-PE microbeads (Miltenyi Biotec) and the AutoMACS cell sorter (Miltenyi Biotec), respectively. For functional assays with cells present in the SF, total CD14+ Mo, CD1c+ and CD141+ cDC were sorted by following the flow cytometry strategy previously described in the Methods section.
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