The largest database of trusted experimental protocols

18 protocols using periodic acid schiff staining kit

1

Glycogen Storage Evaluation in Differentiated HLCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
Differentiated HLCs were assessed for glycogen storage using the Periodic Acid-Schiff Staining Kit (Sigma) according to manufacturer instructions.
+ Open protocol
+ Expand
2

Hepatic and Bile Duct Differentiation Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Hepatocyte differentiation was induced by switching the medium to basal SCMA supplemented with 20 ng/ml HGF (R&D system), 20 ng/ml Oncostatin M (OSM, R&D system), 0.1 μM Dexamethasone (Dex, Sigma-Aldrich), and with 2 μM TGFβ receptor inhibitor (E-616452) or γ-secretase inhibitor (Compound E, 0.5 and 1 μM) for 2 weeks. The hepatic differentiation was verificated by glycogen storage assay using a periodic acid-Schiff staining kit (Sigma-Aldrich) according to the product instructions. Bile duct differentiation was induced by 3D culture. iHepSCs were suspended in cold SCMA supplemented with 20 ng/ml EGF and mixed 1 : 1 with Matrigel. Then, the mixture was plated into 24-well plate (0.5 ml/well) and placed in an incubator at 37°C for 30 min to allow the formation of 3D Matrix. 0.5 ml of SCMA was then carefully overlayed on the gel. The cells were cultured for approximately 1 week to allow the formation of bile duct-like structures [16 (link)].
+ Open protocol
+ Expand
3

Diabetic Kidney Injury Mechanisms

Check if the same lab product or an alternative is used in the 5 most similar protocols
Sodium citrate trihydrate, HAuCl4, RNAlater solution, and Periodic Acid Schiff staining kit were all provided from Sigma-Aldrich, (St. Louis, USA). Streptozotocin and antibodies against TGF-β1 (Cat. No. sc-146) were both purchased from Santa Cruz biotechnology (Santa Cruz, USA). Albumin Rat ELISA kit, HRP/DAB IHC Detection Kit-Micropolymer, and the primary antibodies against Collagen IV (Cat. No. ab6586), Fibronectin (Cat. No.ab2413), nephrin (Cat. No.ab1830990), podocin (Cat.No.ab50339) were all provided from Abcam (Cambridge, UK). The superoxide dismutase assay kit was purchased from Cayman Chemical, (Ann Arbor, USA). Catalase assay kit was provided from Abbexa (Cambridge, UK). The Total RNA extraction kit was from iNtRON Biotechnology, Inc. (Seongnam, Korea). cDNA reverse transcription kit and SYBR green PCR master mix were purchased from Takara (Beijing, China). All primers were synthesized by Integrated DNA Technologies, INC. (Coralville, IA, USA). All other chemicals, buffers, and solvents used were of pure analytical grade.
+ Open protocol
+ Expand
4

Quantifying Glomerular Scarring in Kidney Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Kidneys were fixed in 10% buffered neutral formalin, further processed and paraffin embedded. Three micrometer sections were cut and stained using a Periodic acid Schiff staining kit (Sigma) according to the manufacturers' instructions. Tissues were imaged using a Leica DN2000 microscope and micrographs taken using Leica Application Suite software. Image analysis was performed using ImageJ; all images were contrast enhanced using the same parameters.
Glomerulosclerosis was scored for each glomerulus as follows: 0 = normal glomeruli; 1 = up to 25% involvement; 2 = 25%‐50% involvement; 3 = 50%‐75% involvement; 4 = over 75% involvement. The glomerulosclerosis index was calculated according to the formula ([1 × N1] + [2 × N2] + [3 × N3] + [4 × N4])/(N0 + N1 + N2 + N3 + N4), where Nx is the number of glomeruli with each given score.
+ Open protocol
+ Expand
5

THP-1 Cell Culture and Immunoassay Protocols

Check if the same lab product or an alternative is used in the 5 most similar protocols
THP-1 cells were maintained in RPMI 1640 medium supplemented with 10% fetal bovine serum (FBS) and cultured at 37°C in a humidified incubator containing 5% CO2. R848 and CpG were purchased from Sigma. Antibodies against various proteins were obtained from several sources. Mouse monoclonal antibodies (mAb) included mAb against Pin1 (previously described [36 (link)]), against α-tubulin and β-actin (Sigma), and against cyclin D1 (Santa Cruz Biotechnology). Rabbit antibodies included those against Pin1 phosphorylated at Ser16 (Cell Signaling Technology), IRAK-1 (Millipore), and IRF-7 (Abcam). Antibodies against Pin1 phosphorylated at Ser71 were previously described (37 ). A periodic acid—Schiff staining kit was purchased from Sigma. Enzyme-linked immunosorbent assay kits for IgG anti—double-stranded DNA (anti-dsDNA) and IL-17 were from eBioscience. All assays were performed according to the manufacturers’ instructions. Samples of human peripheral blood mononuclear cells (PBMCs) were from the Division of Rheumatology at Beth Israel Deaconess Medical Center, and sample collection was approved by the Beth Israel Deaconess Medical Center IRB.
+ Open protocol
+ Expand
6

Histological Analysis of Testis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Testes were isolated and weighed followed by fixation in Bouin’s solution or 4% paraformaldehyde and parrafifin embedded. For analysis of testis morphology, Bouins fixed tissue sections (5 μm) were stained with a periodic acid-Schiff staining kit (Sigma, St. Louis, MO) followed by staining with hematoxylin. For analysis of EGFP or AR expression, paraformaldehyde fixed sections were probed with either primary goat antisera against GFP (Abcam Inc., Cambridge, MA ab5450, 1:1000 dilution) or polyclonal primary rabbit antisera against AR (Santa Cruz Biotechnology, Santa Cruz, CA AR C19, Sc-815, 1:1000 dilution). For EGFP imunodetection, biotin conjugated mouse anti-goat secondary antisera (Vectastain Elite ABC kit, Vector Laboratories, Burlingame, CA) was added and bound antibodies were detected as described by the kit instructions using DAB staining solution. Slides were counterstained with hematoxylin. For AR immunodetection, secondary donkey anti-rabbit antisera with conjugated cy3 fluor was added followed by staining with DAP1(4',6-diamidino-2-phenylindole). A charged coupled device (CCD) video camera system was used to capture images of tubule cross-sections.
+ Open protocol
+ Expand
7

Measuring Albumin and Urea Secretion in HCC Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
To determine the secretion of human albumin and urea, HCC cells were seeded in 6-well plates for 24 h, and the medium was then replaced with fresh DMEM without fetal bovine serum for another 24 h. The supernatant was collected according to the manufacturer’s instructions. Human albumin was measured with a Human Albumin ELISA Quantitation kit (Assay Pro), and urea was measured with a QuantiChromTM Urea Assay Kit (BioAssay System). The Periodic-Acid Schiff staining kit was obtained from Sigma-Aldrich. Cells were fixed and stained following the manufacturer’s instructions. For oil red O staining, HCC cells were stained with oil red O (Sigma-Aldrich) according to the manufacturer’s instructions.
+ Open protocol
+ Expand
8

Glycogen Storage Assessment in HLCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
The Periodic Acid-Schiff Staining Kit (Sigma) was using to assess differentiated HLCs for glycogen storage according to the manufacturer's instructions.
+ Open protocol
+ Expand
9

Kidney Glomerulosclerosis Histopathology Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Kidneys were fixed in 10% buffered neutral formalin, further processed and paraffin embedded. 3μm sections were cut and stained using a Periodic acid Schiff staining kit (Sigma) according to the manufacturer’s instructions. Tissues were imaged using a Leica DN2000 microscope and micrographs taken using Leica Application Suite software. Image analysis was performed using Image J; all images were contrast enhanced using the same parameters.
Glomerulosclerosis was scored for each glomerulus as follows: 0=normal glomeruli; 1=up to 25% involvement; 2=25–50% involvement; 3=50–75% involvement; 4=over 75% involvement. The glomerulosclerosis index was calculated according to the formula [(1xN1)+(2xN2)+(3xN3)+(4xN4)]/(N0+N1+N2+N3+N4) were Nx is the number of glomeruli with each given score.
+ Open protocol
+ Expand
10

Quantifying Tubular Injury and Fibrosis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Formalin-fixed, paraffin-embedded renal tissues including ATN and normal control were sectioned at 4 µm thickness and stained for histological examination. These sections were stained with a periodic acid-Schiff staining kit (Merck Millipore, Billerica, MA, USA) and Masson’s trichrome Kit (American Master Tech Scientific, Lodi, CA, USA) to determine the severity of tubular injury and percentage of interstitial fibrosis, respectively. All sections were examined by a pathologist (T.-C.S.) unaware of the clinical and laboratory data. The characteristics of tubular injury included tubular cell swelling, loss of brush border, or nuclear condensation. The severity of tubular injury was scored from 0 to 4 according to the percentage of the injured area of the section (0—no change; 1—changes affecting 1–25%; 2—changes affecting 25–50%; 3—changes affecting 50–75%; 4—changes affecting 75–100% of the section).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!