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9 protocols using goat anti rabbit igg

1

Western Blot Analysis of Cell Signaling

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Lung tissues were homogenized in lysis buffer containing RIPA II cell lysis buffer (GenDEPOT, Barker, TX), protease inhibitors and phosphatase inhibitors and put on the ice for 20 min. These lysed proteins were centrifuged for 15 min. Thirty microgram of protein from supernatant was separated by SDS-PAGE and transferred to PVDF membrane (Bio-Rad Laboratories, Hercules, CA). After blocking with 5% skim milk (Bio-Rad), membrane was incubated with 2 µl primary antibodies against Bax, Bcl-2, Caspase-3, Caspase-9 (Cell Signaling Technology, Denver, MA for all), AT1R (Sigma-Aldrich Co.), AT2R (Sigma-Aldrich Co.), Mas receptor (Alomone Labs, Israel), ACE (Santa Cruz Biochemicals, Santa Cruz, CA), and GAPDH (Bioworld technology, St. Louis Park, MN). After washed with T-TBS buffer 6 times for 5 min each, membrane was incubated with goat anti-rabbit IgG (Enzo Life Sciences) for 30 min. Membrane was then washed again with T-TBS, developed using ECL (Amersham, Arlington, IL) and visualized using LAS-1000 (Fujifilm, Japan).
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2

Rhizome Extract Characterization

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Rhizomes of A. macrocephala were purchased from Kimitongsang (Seoul, Korea) in April 2009 and authenticated by Prof. K. S. Yang at College of Pharmacy, Sookmyung Women’s University. A voucher specimen (No. SPH 09003) was deposited in the herbarium of Sookmyung Women’s University. β-catenin antibody were purchased from BD Transduction Laboratories (San Jose, CA, USA). Galectin-3 antibody was purchased from Santa Cruz Biotechnology (Dallas, Texas, USA). Lamin A/C and cyclin D1 antibodies were purchased from Cell Signaling (Danvers, MA, USA), and β-actin antibody was from Sigma-Aldrich (St Louis, MO, USA). HRP-conjugated goat anti-mouse IgG and goat anti-rabbit IgG was purchased from Enzo Life Science (East Farmingdale, NY, USA). Other chemical reagents including 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl-tetrazolium bromide (MTT), were purchased from Sigma-Aldrich.
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3

Biochemical Assays for Cellular Cytotoxicity Analysis

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Thiazolyl blue tetrazolium bromide (MTT), 2″,7″-dichlorodihydro-fluorescein diacetate (DCFH-DA) and other reagents were purchased from Sigma-Aldrich Co. (St. Louis, MO, USA). Tris was purchased from Duchefa Biochemie (BH Haarlem, The Netherlands), dimethyl sulfoxide (DMSO) from Junsei Chemical Co. (Tokyo, Japan). Fetal bovine serum (FBS) and penicillin-streptomycin (P/S) were purchased from Gibco (Los Angeles, CA, USA). Dulbecco's Modified Eagle's Medium (DMEM) was purchased from Welgene Inc. (Gyeongsangbuk-do, Korea). BCA reagent and albumin standard were from Thermo Scientific (Waltham, MA, USA). Primary Bcl-2 antibody was purchased from Oncogene (Bracknell, England). Bax and PAPR antibodies were obtained from Cell Signaling (Danvers, MA, USA) and cytochrome c, caspase-9, and β-actin antibodies from Santa Cruz (Paso Robles, CA, USA). Caspase-3 antibody was obtained from EMD Millipore (Billerica, MA, USA). Secondary antibodies goat anti-rabbit IgG, pAb, goat anti-mouse IgG, pAb, and caspase-3 activity assay kit were obtained from Enzo Life Sciences (Farmingdale, NY, USA). West-Q chemiluminescent substrate was purchased from GenDEPOT (Katy, TX, USA). The solvents used were of HPLC grade, unless stated otherwise.
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4

Western Blot Analysis of COX Proteins

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Cells were lysed on ice in PRO-PREP protein extraction solution (iNtRON Biotechnology, Seongnam, Republic of Korea). The protein concentration was analyzed by Pierce BCA protein assay kit (Thermo Scientific). The protein samples (30 μg/lane) were resolved using SDS-PAGE and transferred to nitrocellulose membranes (Bio-Rad, Hercules, CA, USA). The membranes were blocked in 5% skim milk in TBST (10 mM Tris–HCl, pH 8.0, 150 mM NaCl, 0.05% Tween 20) for 1 h and incubated with the specific primary antibody in the blocking solution at 4 °C overnight. Antibodies against COX-1 (#sc-19998; Santa Cruz Biotechnology, Dallas, TX, USA), COX-2 (#12282; Cell Signaling Technology, Danvers, MA, USA), and GAPDH (#sc-47724; Santa Cruz Biotechnology) were used. The secondary antibodies used were goat anti-mouse IgG (#ADI-SAB-100-J; Enzo, Farmingdale, NY, USA) or goat anti-rabbit IgG (#ADI-SAB-300-J; Enzo). Finally, the detection was performed using an enhanced chemiluminescence system (Amersham Pharmacia Biotech, Piscataway, NJ, USA).
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5

Phytochemical Analysis and Anti-inflammatory Effects

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Ferulic acid and 5-hydroxymethyl-2-furaldehyde (5-HMF) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Albiflorin and paeoniflorin were the products of Wako (Osaka, Japan). Nodakenin was purchased from NPC BioTechnology Inc. (Daejeon, Korea). The purity of all reference standards was ≥98.0%. HPLC-grade methanol, acetonitrile, and water were obtained from J.T.Baker (Phillipsburg, NJ, USA). Glacial acetic acid, analytical reagent grade, was purchased from Junsei (Tokyo, Japan). RPMI 1640, fetal bovine serum, TNF-α, tissue culture reagents, 2′,7′-bis(2-carboxyethyl)-5(6)-carboxyfluorescein acetoxy-methylester (BCECF-AM), DAF-FM diacetate, and CM-H2DCFDA, Alexa Fluor 488 and 594 conjugated second antibodies were purchased from Invitrogen (San Diego, CA). Biotin 3′ End DNA Labeling Kit, LightShift® Chemiluminescent EMSA Kit, Biodyne® Precut Nylon Membranes, Lipofectamine LTX reagent, and Renilla-Firefly Luciferase Dual Assay Kit were purchased from Pierce Biotechnology (Rockford, USA). Primary antibodies, including mouse anti-ICAM-1, goat anti-VCAM-1, rabbit anti-E-selectin, mouse anti-NF-κB, mouse anti-p-IκB-α, rabbit anti-HO-1, and rabbit anti-Nrf2, were purchased from Santa Cruz Biotechnology (CA, USA). Donkey anti-goat IgG-H+I were purchased from Bethyl (Montgomery, USA) and goat anti-rabbit IgG and goat anti-mouse IgG were purchased from Enzo (Farmingdale, USA).
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6

Confocal Microscopy Analysis of Autophagy in PDAC Cells

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For confocal studies, PDAC cells were cultured and treated with ATO, HO-1 inhibitors, Zinc Protoporphyrin (Santa Cruz, TX, USA), Tin Protoporphyrin (Frontier Scientific, UT, USA), 1 mM N-acetyl cysteine (Sigma-Aldrich, MO, USA), or 25 µM Chloroquine (Cayman Chemical, MI, USA). Chamber slides were processed for confocal microscopy using primary antibody ATG5 (CST, MA, USA) at 1:500 and secondary antibody Alexa Fluor 488 goat anti-rabbit IgG (H + L) (ThermoFisher, Waltham, MA, USA) at 1:200, both in 1% goat serum. Western blots were run as described above. Primary antibodies were HO-1 (Enzo, NY, USA), ATG5 (CST, MA, USA), and LC3B (CST, MA, USA), along with secondary antibodies goat anti-rabbit IgG (Enzo, NY, USA) or anti-mouse IgG (CST, MA, USA).
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7

Western Blot Analysis of Aortic Proteins

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Aortic tissue and cell homogenates (protein of 30–50 μg) were separated using 10% SDS-polyacrylamide gel electrophoresis (PAGE) and transferred onto nitrocellulose membranes. Blots were then blocked by 5% Bovine Serum Albumin (BSA) (GenDEPOT, Katy, TX, USA) powder in Tris-bufferd saline (TBS) for 1 h, and incubated with the antibodies against ICAM-1, VCAM-1, E-selectin, MMP-2, MMP-9, eNOS, p-eNOS, Akt, p-AKT, and GTPCH (Santa Cruz Biotechnology, INC, Dallas, TX, USA) (1:1000 dilution in 0.05%TBS-T (Tween 20)). Subsequently, the membrane was then incubated with a secondary antibody of goat anti rabbit IgG or goat anti mouse IgG conjugated to horseradish peroxidase (Enzo Life Sciences, Farmingdale, NY, USA) (1:5000 dilution in 0.05%TBS-T), and the bands were detected with EzWestLumi plus solution (Cat. no. WSE-7120, Atto Corporation) using a ChemiDoc (Bio-Rad Laboratories, Hercules, CA, USA). Densitometry analysis of protein bands was conducted with the ImageJ (NIH, Bethesda, MD, USA) program.
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8

Western Blot Analysis of Renal Proteins

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Renal tissue homogenates (40 μg of protein) were separated using 10% SDS-polyacrylamide gel electrophoresis and transferred to nitrocellulose paper membranes. Blots were then blocked by 5% BSA powder in Tris-buffered saline (TBS) for 1 h, and incubated with appropriate primary antibodies to Podocin, ICAM-1, MCP-1, HMGB-1, TNF-α, Bcl-2, Bax, Caspase-3, Caspase-9, phospho-p38, p38, phospho-ERK1/2, ERK1/2, phosphor-JNK, JNK or β-Actin (Santa Cruz Biotechnology, Santa Cruz, CA, USA). Subsequently, the membrane was incubated with a secondary goat anti-rabbit IgG or goat anti-mouse IgG antibody conjugated to horseradish peroxidase (Enzo Life Sciences, Farmingdale, NY, USA). The bands were visualized with enhanced chemiluminescence (Amersham, Buckinghamshire, UK). Protein expression levels were determined by analyzing signals captured on the nitrocellulose membranes using the ChemiDoc image analyzer (Bio-Rad, Hercules, CA, USA).
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9

Oxidative Stress Cell Signaling Pathway

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DMEM low glucose, fetal bovine serum, TNF-α, cell culture reagents, and CM-H2DCFDA were purchased from Invitrogen (San Diego, CA). Primary antibodies, including mouse anti-cyclin D1, rabbit anti-CDK4, mouse anti-cyclin E, rabbit anti-CDK2, rabbit anti-p21, mouse anti-p27, rabbit anti-MMP2, and rabbit anti-MMP9, were purchased from Santa Cruz Biotechnology (CA, USA). Goat anti-rabbit IgG and goat anti-mouse IgG were purchased from Enzo (Farmingdale, USA).
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