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18 protocols using zb 2301

1

Protein Extraction and Western Blot Analysis of Liver Tissue

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The liver tissues were weighed and prepared by manual grinding on ice. Total protein was used RIPA (Solarbio, Beijing, China) while nuclear and cytosolic proteins were extracted using a nuclear and cytosolic extraction reagent kit (P1200-100, Applygen, Beijing, China). The protein concentration was determined using a bicinchoninic acid protein assay, as recommended by the manufacturer. Equal amounts (40 μg) of proteins were subjected to 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto polyvinylidene fluoride (PVDF) membranes (10600023, GE, MA, United States). The membranes were incubated with primary antibodies against NRF2 (1:1000 dilution) and histone-H3 (1:1000 dilution), KEAP1 (1:1000), NQO1 (1:1000), HO1 (1:1000), Bcl-2 (1:1000), Bcl-xL (1:1000), GAPDH (1:2000), and then probed with secondary antibodies conjugated to HRP (ZB-2301, Zhongshan Golden Bridge Biotechnology Co., Beijing, China). Relative expression was analyzed by Image J software (NIH, MD, United States).
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2

Western Blot Analysis of PINK1 and Parkin

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NP-40 Lysis Buffer (Beyotime, Shanghai, China) was used to extract total proteins as in our previous study19 (link). After extraction, the proteins were stored at −80 °C for subsequent western blot analysis. The analysis was performed as described previously57 (link). Briefly, proteins were separated by sodium dodecylsulfate polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to a polyvinylidene fluoride (PVDF) membrane, and then incubated with primary rabbit antibodies specific to PINK1 (1:1000, ab23707, polyclonal, Abcam, Cambridge, MA, UK), Parkin (1:1000, A0968, polyclonal, ABclonal, College Park, MD, USA), Hsp60 (1:5000, GTX110089, polyclonal, Genetex Inc., Irvine, CA, USA) and GAPDH (1:2000, Zhongshan Golden Bridge Biotechnology, Beijing, China) or mouse antibodies specific to COX IV (1:2000, GTX101499, polyclonal, Genetex Inc., Irvine, CA, USA) and β-actin (1:2000, Zhongshan Golden Bridge Biotechnology, Beijing, China). The samples were incubated with horseradish peroxidase (HRP) -conjugated secondary antibodies (1:20000; ZB-2305 and ZB-2301, Zhongshan Golden Bridge Biotechnology, Beijing, China), and developed with Immobilon Western Chemiluminescent reagents (Millipore, Billerica, MA, USA).
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3

Protein expression profiling in myocardium

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Myocardium specimens were washed in phosphate buffered saline (PBS) and lysed with radioimmunoprecipitation buffer (sc-24948, Santa Cruz Biotechnology, Santa Cruz, CA, USA) containing 10 μg/mL of the protease inhibitor, phenylmethylsulfonyl fluoride. After centrifugation (12,000× g, 10 min, 4 °C) three times, the amount of protein in the supernatant was measured using bovine serum albumin (SK3051, Sangon Biotech, Shanghai, China) as a standard. Proteins were then subjected to sodium dodecyl sulfate–polyacrylamide gel electrophoresis followed by western blotting. Antigen–antibody complexes were detected by antibodies: anti-BNP diluted 1:500 (AB1549; Millipore, Burlington, MA, USA), anti–ET-1 diluted 1:1000 (ab2786; Abcam, Cambridge, UK), TGF-β1 diluted 1:2000 (ab92486, Abcam), and anti-GAPDH diluted 1:5000 (ab8245, Abcam) at 4 °C overnight. Horseradish peroxidase-labelled goat anti-rabbit IgG (ZB-2301; Zhongshan Golden Bridge Biotechnology, Beijing, China) or rabbit anti-goat IgG (ZB-2306, Zhongshan Golden Bridge Biotechnology) was used at a 1:5000 dilution at room temperature for 2 h. An enhanced chemiluminescence detection system, Electrophoresis Gel Imaging Analysis System (MFChemiBIS 3.2; DNR Bio-Imaging Systems, Jerusalem, Israel), was used to visualize blots.
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4

Protein Expression Analysis Protocol

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After treatment, total proteins were extracted from cells using radioimmunoprecipitation assay lysis buffer (RIPA) with 1 mM phenylmethanesulfony fluoride (PMSF) (both from Beyotime Biotechnology, Shanghai, China) and quantified using a bicinchoninic acid (BCA) assay. Twenty micrograms of proteins were separated on sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) gels (12%) and transferred onto a PVDF membrane. Subsequently, the membrane was blocked with 5% non-fat milk in TBST solution for 2 h at room temperature (RT). After incubation with the primary antibodies against Wnt-4 (sc-5214), Frizzled-2 (sc-68327; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), β-catenin (9582s), GSK-3β (9315; Cell Signaling Technology, Inc., Beverly, MA, USA), cyclin D1 (BS6532), Col-II (BS1071; Bioworld Technology, Natong, China) overnight at 4°C, and the HRP-conjugated secondary antibodies (ZB-2301; Zhongshan Golden Bridge Biotechnology Co., Ltd.) for 1 h at RT, the blots were detected using a Bio-Rad Chemi Doc XRS+ (Bio-Rad), and β-actin was used as the control.
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5

Pae's Inhibition of Gastric Cancer

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Pae (solid, 20 mg/bottle, purity >98% by high performance liquid chromatography) was obtained from Dalian Meilun Biotechnology Co., Ltd. (Dalian, China; cat. no. MB1762-S). The BGC823 human gastric cancer cell line was obtained from CHI Scientific, Inc. (Jiangyin, China). RPMI-1640 medium and fetal bovine serum (FBS) were purchased from Hyclone; GE Healthcare Life Sciences (Logan, UT, USA). A Cell Counting kit-8 (CCK-8) was purchased from Beyotime Institute of Biotechnology (Shanghai, China). An Annexin V-fluorescein isothiocyanate/propidium iodine (FITC/PI) apoptosis detection kit was obtained from BD Biosciences (San Jose, CA, USA). Cell lysis buffer, antibiotic (penicillin and streptomycin) solution and dimethyl sulfoxide (DMSO) were from Beijing Solarbio Science & Technology Co., Ltd. (Beijing, China). A Transwell chamber and Matrigel were from Corning Incorporated (Corning, NY, USA). An Enhanced Chemiluminescence (ECL) kit was from EMD Millipore (Billerica, MA, USA). A β-actin antibody, and horseradish peroxidase-labeled goat anti-mouse and anti-rabbit secondary antibodies (cat. nos. TA-09, ZB-2305 and ZB-2301 respectively) were from Beijing Zhongshan Golden Bridge Biotechnology Co., Ltd. (Beijing, China). MMP-2 (cat. no. YT2798) and MMP-9 (cat. no. YT1892) antibodies were from ImmunoWay Biotechnology Company (Plano, TX, USA).
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6

Synthesis and Characterization of 1-CP-U

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1-CP-U, synthesized according to the reported procedure (5 ), was generously provided by Ms. Ning Qizhi, who originally synthesized the agent. The chemical structure of 1-CP-U is demonstrated in Fig. 1. A total of 1.0 g of 1-CP-U crystal was weighed, totally dissolved it in ultrapure water facilitated by a 0.25 mol/l hydrochloric acid solution, and then the pH was adjusted to 4.0 by adding 0.25 mol/l sodium hydroxide solution. Calculating the concentration of the stock solution as 63.39 mM, it was diluted to the required concentrations in conditional medium and then stored at 4°C. The antibodies were as follows: Polyclonal rabbit anti-human Bax, MMP-2 and MMP-9, monoclonal mouse anti-human Bcl-2, (Wuhan Boster Biological Technology., Ltd.; A0315-2, BA0569, BA0573 and BM0200, respectively), and β-actin was purchased from Zhongshan Golden Bridge Biotechnology Co., Ltd., (Beijing, China; TA-09). The goat anti-mouse or anti-rabbit secondary antibodies were from Zhongshan Golden Bridge Biotechnology (ZB-2305 and ZB-2301).
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7

Immunoblotting Analysis of PDLSCs

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Collection and lysis of PDLSCs was conducted using RIPA Lysis Buffer which contains 1% protease inhibitor cocktail (Solarbio). Protein concentration was determined by a BCA kit (Thermo) and a total of 30 μg of protein was used for western blot analysis. The primary antibodies against RUNX2 (CST, #12556), GDF5(Abcam, RRID: ab93855), p38 MAPK(Affinity, Cat#AF6456), phosphorylated p38 MAPK (Affinity, Cat#AF4001), JNK(Affinity, Cat#AF6318), phosphorylated JNK(Affinity, Cat#AF3318), ERK(Affinity, Cat#AF0155), phosphorylated ERK(Affinity, Cat#AF1015), and β-ACTIN (Abcam, RRID: ab8226) diluted at 1:1,000 overnight at 4°C. Three washes were done using TBST. Afterwards, incubation of the membranes was done with the anti-rabbit and anti-mouse secondary antibodies (ZB-2301 and ZB-2305, Zhongshan Golden Bridge Biotechnology, Beijing, China) which is diluted at 1:10,000 at room temperature for 1 h. Visualization of the bands was done by enhanced chemiluminescence using the Bio-Rad system for detection (ChemiDocTM MP Imaging System, USA). Intensity of the bands was measured using ImageJ. β-ACTIN internal control was used to ensure equal protein loading.
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8

Quantitative Western Blot Analysis

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Western blot analysis was performed, as previously described (17 (link)). Total lysis of the cells was conducted with RIPA buffers (Thermo Fisher Scientific, Inc.) and protein concentration was determined with a bicichoninic acid protein assay kit (Thermo Fisher Scientific, Inc.). Equal quantities (50 µg) of proteins were separated and transferred onto polyvinylidine difluoride membranes. The membranes were blocked with 5% non-fat dried milk, following which the membranes were probed overnight at 4°C with the following antibodies: Rabbit monoclonal anti-Wnt3a (Ab2721 1:1,000), rabbit monoclonal anti-p-GSK-3β (Ab5558; 1:2,000), rabbit monoclonal anti-p-β-catenin (Ab9561; 1:2,000), rabbit monoclonal anti-GSK-3β (Ab12456; 1:2,000), rabbit monoclonal anti-β-catenin (Ab4176; 1:2,000) or mouse monoclonal anti-β-actin (Ab3700; 1:2,000) (all from Abcam, Cambridge, MA, USA). This was followed by incubation with either horseradish peroxidase-conjugated goat anti-rabbit (ZB-2301) or anti-mouse antibody(ZB-2305) (1:5,000; Zhongshan Golden Bridge Biotechnology, Beijing, China) for 2 h at room temperature. Immunoreactive proteins were visualized using enhanced chemiluminescence, and signal intensity was detected and quantified using Alpha Imager (Alpha Innotech Corporation, San Leandro, CA, USA).
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9

Western Blot Analysis of Liver Proteins

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Whole protein lysates of liver tissue were extracted using RIPA buffer (25 mM Tris-HCl (pH 7.6), 150 mM NaCl, 1% NP-40, 1% sodium deoxycholate, and 0.1% SDS, Thermo Fisher Scientific) supplemented with 1% protease inhibitor cocktail and 1% phenylmethylsulfonyl fluoride. Protein concentrations were measured using a BCA Protein Assay Kit. Aliquots containing 50 μg of protein were loaded onto an 8% SDS-PAGE gel, transblotted onto a polyvinylidene difluoride (PVDF) membrane (Bio-Rad Laboratories, USA), blocked for 1 h at room temperature with 5% bovine serum albumin in TBS buffer, and subsequently incubated overnight with respective primary antibodies against p65, p38, ERK, caspase-9, caspase-3, and ß-actin (internal control). The membrane was then incubated with secondary HRP conjugated antibodies (ZB 2301, Zhongshan Golden Bridge Biotechnology Co. Ltd., China). The bound complexes were detected with a chemiluminescence solution (ECL) purchased from Millipore (#WBKLS0050, Merck Millipore, USA) according to the manufacturer's instructions. Chemiluminescence was imaged on a LAS-3000 system (FUJIHILM, Tokyo, Japan). The immunoblot bands were quantified using densitometric analysis, and the ratio of each protein to ß-actin was calculated and normalized to the values of the mice fed the normal chow (set as 1).
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10

Western Blotting of SIRT1 in Oocytes

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For western blotting, 120 oocytes were lysed in 2×SDS sample buffer, boiled for 5 min at 100°C and then subjected to 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). The separated proteins were transferred to a polyvinylidene difluoride (PVDF) membrane. Membrane was blocked in Tris-buffered saline (TBS) containing 5% BSA and 0.1% Tween-20 for 2 h and then incubated with rabbit anti-SIRT1 antibody (1:1000) (9475; Cell Signaling Technology, Inc.) and mouse anti-β-actin antibody (1:1000) (BE0021; Easybio Technology, Beijing). After multiple washes in TBS containing 0.1% Tween-20 and incubation with horseradish peroxidase (HRP)-conjugated anti-rabbit IgG (1:1000) (ZB-2301; Zhongshan Golden Bridge Biotechnology, Beijing) and horseradish peroxidase conjugated anti-mouse IgG (1:1000) (ZB-2305; Zhongshan Golden Bridge Biotechnology, Beijing), respectively, finally, the membranes were washed 3 times in TBS containing 0.1% Tween-20 and visualized using Bio-Rad ChemiDoc XRS+.
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