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13 protocols using igg2a pe

1

T-Cell Maturation and Phenotyping

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Human CB T-cells, including those which were deficient in PKCζ, were maturated as previously described using phytohaemagglutinin (PHA) and IL-2 [22 (link),28 (link)]. Maturation was gauged by flow cytometry, measuring the expression of CD45RA and CD45RO using anti-CD45RA-APC, anti-CD45RO-PE, anti-CD3-FITC or isotype control mix (IgG2b-APC, IgG2a-PE and IgG1-FITC) antibodies (all BD Biosciences). The data were analysed on a BD FACScan using BD CellQuest software (BD Biosciences). Cultures were set up such that at each time point, a count was made and cell concentrations were re-adjusted based on the number of viable cells as described under ‘Results’ section.
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2

Multiparameter Flow Cytometry Analysis

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The following monoclonal antibodies were used: IgG1-FITC, IgG2a-PE, IgG1-PE, IgG2a-PErCP, IgG1-APC, anti–CD3-APC (SK7), anti–CD4-PerCP (SK3), anti–CD25-PE (2A3), anti–CD86-APC (2331), anti–CD14-PerCP-Cy5.5 (M5E2; all from BD Biosciences); anti–CD80-PE (MAB104; Beckman Coulter), anti MHC-II FITC (CR/43, Dako Cytomation). Flow cytometry was performed using a LSR II (BD Biosciences) flow cytometer. Acquired data were analyzed with FlowJo (Tree Star, Inc.).
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3

Flow Cytometry Immunostaining Analysis

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Cell surface and intracellular immunostaining analyses were performed using an Accuri C6 Flow Cytometer. NK cells and T cells were stained with the dye-conjugated mouse mAbs to human CD56-PE-Cy5 (Beckman Coulter), CD3-PE (eBioscience), CCR7-FITC (R&D Systems), granzyme B-PE (Invitrogen), and CD16-FITC, CD8-PE-Cy5, CD45RA-FITC, CD45RO-PE, and CD57-FITC (BD Biosciences). MDSCs were stained for CD11b-FITC, CD14-PE, CD33-APC, CD34-PE-Cy5, CD11c-PE, HLA-DR-PE, DC-SIGN-FITC, CD80-FITC, CD86-FITC, and CD83-PE (BD Biosciences and eBioscience), as well as IDO-A488 (R&D Systems), NOS2-PE (Santa Cruz Biotechnology), and COX1-FITC/COX2-PE (BD Biosciences). The corresponding mouse antibody isotype controls IgG1-FITC, IgG2b-FITC, IgG1-PE, IgG2a-PE, IgG1-PE-Cy5, IgG1-APC, and IgG1-A488 (BD Biosciences) were used, as appropriate. Before staining, the cells were treated for 20 min at 4°C in PBS buffer containing 2% human serum, 0.5% BSA, 0.1% NaN3, and 1 μg/ml of mouse IgG (Sigma-Aldrich) to block non-specific binding. Cell permeabilization for intracellular staining was performed using the Foxp3 Fix/Perm Buffer Set (eBioscience), according to the manufacturer’s protocol. Cells were stained for 40 min at 4°C followed by washing with PBS buffer containing 0.5% BSA and 0.1% NaN3, then fixed and stored in 4% paraformaldehyde until analysis.
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4

Flow Cytometric Analysis of Splenic Immune Cells

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At the end of the experiment, spleens were isolated from ApoE KO mice and placed in a chilled RPMI-1640 medium (Gibco, Carlsbad, CA, USA), mashed through a 70 µm nylon cell filter (Corning, Corning, NY, USA), and centrifuged at 400× g for 5 min. The obtained splenocytes were stained with relevant antibodies. The following antibodies were used: CD4-PE (553048, PE Rat Anti-Mouse CD4, BD Biosciences, Franklin Lakes, NJ, USA), CD8-PE (553032, PE Rat Anti-Mouse CD8a, BD Biosciences, USA), and FoxP3-Alexa Fluor 488 (560403, Alexa Fluor 488 Rat anti-Mouse Foxp3, BD Biosciences, USA). The following isotype match antibodies were used: IgG2a-PE (551799, PE Rat IgG2a, k Isotype Control, BD Biosciences, USA), and IgG2b-FITC (556923, FITC Rat IgG2b, k Isotype Control, BD Biosciences, USA). A flow cytometry analysis was performed on a Beckman Coulter Flow Cytometer (BD Biosciences, USA). Obtained data were analyzed using FlowJo software (FlowJo LLC, Franklin Lakes, NJ, USA).
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5

Quantifying Monocyte and Macrophage Surface Markers

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CD14+ cells present in isolated PBMC were determined using anti-human CD14-PE (clone M5E2, BD Biosciences, Franklin Lakes, NJ) and an isotype matched negative control, IgG2a-PE (BD Biosciences). PBMC were stained for 30 minutes at 4°C, washed with 1% BSA in PBS and fixed with 2% paraformaldehyde (Electron Microscopy Sciences, Hatfield, PA). Immunopositive cells were analyzed by acquisition of 10,000 events on a FACS Canto II flow cytometer and analyzed using FlowJo (Treestar, Ashland OR). To analyze CD4 or CCR5 protein expression on the macrophage surface, MDM were detached from culture dishes with TrypLE Select (10X) for 30 minutes at 37°C, followed by gentle agitation and scraping. 1–2×105 MDM were stained for CCR5 or CD4 using anti-human CCR5-APC/Cy7 and CD4-FITC, with the isotype-matched negative controls, IgG1-APC/Cy7 or IgG1-FITC (BD Biosciences). Antibodies were titrated to determine the optimal concentration for staining PBMC and MDM. After subtracting out the background fluorescence from the isotype matched control, the mean fluorescence intensity (MFI) for each antigen was determined.
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6

Flow Cytometry for Immune Cell Analysis

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For flow cytometry, the following antibodies were purchased from BD Biosciences: CD25-APC (PC61), CD3-FITC (17A2), CD3-APC-Cy7, CD4-PE (L3T4), CD8a-FITC (LY-2, 53-6.7), CD8a-APC (53-6.7), B220-PE (CD45RA-14.8), Annexin V-APC, CD45-V500, CD14-V450, IgG2a-PE rat isotype (R35–95), IgG2a-APC rat isotype), IgG2a-FITC, IgG2a-V500, IgG2a-V450 rat isotype. CD44-PE (IM7) was purchased from Biolegend, San Diego, CA, USA. Thymocytes, splenocytes and whole blood cells (1 × 106 cells) were incubated with fluorochrome-conjugated antibodies (0.5 μg) for 30 minutes on ice, avoiding light. After two PBS washes, cells were analysed by flow cytometry using BD FACSAria (BD Biosciences) flow cytometer and BD FACSDiva software (BD Biosciences), as previously described76 (link). Splenic B-cells (B220+), splenic T-cells (CD3+), splenic CD4+ and CD8+ cells were sorted by antigenic criteria using BD FACSAria flow cytometer/cell sorter, with a purity grade of 99%.
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7

Characterization of Cell Surface Markers

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To characterize the expression of cell surface markers, cells were stained with combinations of fluorescently-labeled monoclonal antibodies, washed, and resuspended in isotonic buffer. The fluorescently labeled antibodies used for this study included IgG1 FITC, IgG2a PE, IgG1 PerCP-Cy5.5, IgG2a APC, CD14 PE, CD4 APC, CD3 FITC, HLA-DR FITC, CD4 PerCP-Cy5.5, and CD8 (BD Biosciences) and CD83 APC and CD86 FITC (Miltenyi). In some experiments, cells were labeled with carboxyfluorescein diacetate succinimidyl ester (CFSE; Invitrogen) according to the manufacturer’s protocol. Flow cytometric analyses were performed using Accuri C6 and LSRFortessa cytometers (BD) and FlowJo v10 software (FlowJo).
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8

Degranulation Profiling of Granulocytes

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In accordance with the literature, the most relevant markers have been selected for degranulation analysis [17 (link)]. Degranulation was determined by measuring the expression of CD markers characteristic for azurophil granules (CD63-PE), specific granules (CD15-FITC, CD66b-FITC), gelatinase granules (CD11b-PE), and secretory vesicles (CD13-APC, CD14-APC, CD18-FITC, and CD45-APC) at the plasma membrane by flow cytometry (all antibodies are from BD Biosciences except CD14-APC from Immunotools).
IgG1-FITC, IgG2a-PE (BD Biosciences), and IgG1-APC antibodies (Immunotools) were used as negative isotype controls to place the cells in the first decade of any plot, whereas CD45-FITC, CD45-PE, or CD45-APC (BD Biosciences) single dye staining was used to set compensations. Data analysis was performed by measuring the mean fluorescence intensity (MFI) for each CD marker with BD FACSDiva software (BD Biosciences) on the gated population of granulocytes (FSC-A versus SSC-A), single (SSC-A versus SSC-H), and living cells (negative cells for Sytox Blue staining (Invitrogen)). In total, 10,000 events were recorded per staining. The relative translocation of CD markers to the plasma membrane for each granule was determined by calculating the ratio between MFI of LPS-stimulated cells and nonstimulated control from the same time point.
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9

Immunophenotyping of Mesenchymal Stem Cells

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hADSCs or IPCs were harvested and suspended in PBS. Then, cells were incubated with antibodies conjugated with phycoerythrin (PE) or fluorescein isothiocyanate (FITC) in the dark at 4°C for 30 min, washed with PBS to clear unbound antibody, and analyzed with a flow cytometer (FC500; Beckman Coulter, Brea, CA, USA). Antibodies against CD14-PE, CD19-PE, CD34-PE, CD73-PE, CD105-PE, HLA-DR-PE (human leukocyte antigen D receptor), CD90-FITC, and CD45-FITC were purchased from BD (Franklin Lakes, NJ, USA), and the isotype controls for IgG1-PE, IgG1-FITC, and IgG2a-PE were purchased from BD.
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10

Monocyte Identification by Flow Cytometry

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Cytometer. After blood collection, staining and fixation were performed within 24 h; 30 l of anti-human leukocyte antigen-DR (HLA-DR) fluorescein isothiocyanate (eBioscience, 11-9952) and 20 l of CD14-PE (BD Pharmingen, 555398) were added to the tube. Murine antihuman monoclonal antibodies (IgG2a-PE [BD Pharmingen] and IgG2a-fluorescein isothiocyanate [eBioscience]) were used as the isotype control; anti-coagulant blood (50 l) was then placed at room temperature in the dark; 2 mL of a 10-fold dilution of 1 ϫ lysing solution (LSB03, MultiSciences Biotech, Hangzhou, China) was added; and the mixture was again placed at room temperature in the dark. After the mixture turned translucent, it was centrifuged at 236 g for 5 min, and the supernatant was discarded. The cells were resuspended, and 2 mL of phosphate buffer solution was added. After centrifugation at 236 g for 5 min, the supernatant was discarded. Then 0.3 mL of 1% paraformaldehyde was added, and the mixture was stored at 4 °C until measurement using a flow cytometer (BD FACS Canto Flow Cytometer II 338960, BD Biosciences, San Jose, California) within 24 h. CD14 ϩ cells were determined to be monocytes.
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