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21 protocols using lentiviral packaging kit

1

Overexpression of miR-489 Inhibits Breast Cancer Xenograft Growth

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MiR-489 precursor sequences were amplified and linked to lentiviral vectors. Subsequently, lentivirus with miR-489 was packaged by using lentiviral packaging kit (Genechem Co. Ltd, Shanghai, China). For in vivo tumorigenesis assays, T-47D cells were infected with 1 × 106 units of lentivirus with miR-489 (or empty lentivirus acted as control). Then, 5 × 106 lentivirus-infected T-47D cells were subcutaneously injected into female BALB/c nude mice (4-5-week-old). 5-FU was given through intraperitoneal injection every three days (5 mg/kg) after xenografts reached 0.5 cm in diameter. Xenograft size was measured every 3 days and calculated based on the equation of 1/2 × length × width2. All mice were sacrificed on day 28 days. The animal care and experimental protocols were approved by the Animal Care Committee of The Fifth People’s Hospital of Wuxi, The Medical School of Jiangnan University.
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2

Lentivirus-Mediated miRNA Overexpression

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A lentiviral packaging kit was purchased from GeneChem. A lentivirus carrying hsa-miR-346 or hsa-miR-negative control (miR-NC) was packaged in the human embryonic kidney cell line 293T. Virions were collected according to the manufacturer’s instructions. Stable cell lines were established by infecting U87 and U251 cells with lentiviruses, followed by puromycin selection.
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3

Lentiviral and miRNA Transfection Protocol

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For stable transfection, lentiviruses carrying HOXC13-AS knockdown sequence (shHOXC13-AS) or control sequence (shCtrl) were packaged into LN229 and N3 cells via lentiviral packaging kit (Genechem Shanghai, China) according to manufacturer’s instructions and selected with puromycin at 2 days after transfection. For transient transfection, miR-122-5p mimics (miR-122-5p), control mimics, miR-122-5p inhibitor (anti-miR-122-5p) and inhibitor control were purchased from RiboBio (Guangzhou, China). SATB1 small interfering RNA (siSATB1), control siRNA (siCtrl), c-Myc siRNA (si-c-Myc) and control small interfering RNA (siRNA) (siCtrl) were bought from Genechem (Shanghai, China). RiboFECT CP Transfection Kit (Ribobio, Guangzhou, China) was employed for transient transfection according to manufacturer’s instructions. All sequences were listed in Table S1.
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4

Lentiviral Transduction of miR-1231

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The lentiviral packaging kit were obtained from GeneChem (Shanghai, China). Next, the Lentivirus hsa-miR-1231 expression constructs and lentivirus hsa-negative control (miR-NC) were packaged in human embryonic kidney 293T cells according to the manufacturer’s protocol. Virions were collected from the medium supernatant. Stable cell lines were generated by infecting LN229, U251, and PG1 cells with lentivirus, followed by selection with blasticidin (Invitrogen, Carlsbad, CA).
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5

Establishing CBX8-knockdown and CBX7-overexpression Glioma Cell Lines

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A lentiviral packaging kit was purchased from GeneChem (Shanghai, China) to generate stable CBX8-knockdown (CBX8 siRNA) and CBX7-overexpression (CBX7 cDNA) glioma cell lines. According to the manufacturer's protocol, the hU6-MCS-CMV-EGFP lentiviral vectors encoding CBX8 small hairpin RNA (shRNA) or nontargeting shRNA were transfected with U87 and U251 glioma cells using HitransG A (REVG003, GeneChem, China). The cDNA of CBX7 was inserted into the lentiviral Ubi-MCS-3FL AG-CMV-EGFP vector that was sequentially transduced into the U87 and U251 cells (noncoding cDNA was set as control). CBX8-knockdown and CBX7-overexpression cell models were generated as described above. All the transfection efficiency was confirmed by fluorescence scanning and Western blot.
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6

Lentiviral Transduction of U87 Cells

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Lentiviruses carrying shRNA-miR155HG or shRNA-ANXA2 and the negative control lentivirus (sh-miR155HG sequence is 5′-CUGGGAUGUUCAACCUUAATT-3′; sh-ANXA2 sequence is 5′- CGGGATGCTTTGAACATTGAA -3′; sh-NC sequence is 5′-UUCUCCGAACGUGUCACGUTT-3′) were assembled in the human embryonic kidney cell line 293 T, and the viruses were collected according to the manufacturer’s manual (Genechem). Stably transfected cell lines were established by infecting U87 cells with lentiviruses using a lentiviral packaging kit purchased from Genechem, followed by puromycin selection.
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7

Lentiviral Transduction of Jurkat T Cells

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Lentiviral packaging technology was used to construct a Jurkat T cell line with stable overexpression of ICOS. The lentiviral packaging kit was purchased from Shanghai Genechem Co., Ltd. T cells were seeded in a 24-well plate at a density of 105 cells/ml. The amount of virus and HiTransG P infection solution added to the culture was calculated according to the cell multiplicity of infection (MOI) and virus titer. The cells were centrifuged at 1,000 g for 60 min and cultured at 37 °C for 12–16 hours. Subsequently, the medium was changed and the cells were further expanded. At 72 hours after infection, 3 µg/mL of puromycin was added for selection. The infection rate measured by flow cytometry reached 97%. The concentration of puromycin was then reduced by half for further expansion. After selection, the stable overexpressing lines were confirmed by qPCR, western blot, and flow cytometry. The following primers were used: human GAPDH forward, GAGGTTTTGAGCGTTGAGGT, and reverse, GCAGGCTGTTGTCCGTCTTA; human ICOS forward, TGCAGCCTTTGTTGTAGTCTGC, and reverse, AGGGTCACATCTGTGAGTCTAG. The following antibodies were used: recombinant anti-GAPDH antibody (Abcam, ab181602), anti-ICOS antibody (Biorbyt, orb314633), HRP-conjugated goat anti-rabbit IgG (H+L) antibody (Invitrogen, 65-6120), and PE-conjugated mouse anti-human CD278 (BD, 557802). The data were analyzed with Prism7 and FlowJo7.6.
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8

Notch3 Knockdown in Glioma Cell Lines

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Human glioma cell lines (U87MG, U251) were purchased from the American Type Culture Collection (Virginia, USA). The U87 and U251 glioma cell lines were incubated in 10% FBS DMEM mediums. A lentiviral packaging kit was purchased from GeneChem (Shanghai, China) to generate stable Notch3-knockdown (Notch3 shRNA) glioma cell lines. According to the manufacturer’s protocol, before we began the knockdown, the U251 and U87 were thawed and incubated at a concentration of 5*105 per well (six-well plate) overnight. The next day we changed the medium and added lentiviral vectors that encoded Notch3 small hairpin RNA (shNotch3) and nontargeting shRNA (shNT) to the medium for a 3-day infection. Finally, the U251 and U87 cell lines were harvested for protein extraction. Western blot was used to detect the knockdown efficiency of Notch3. Cell proliferation was determined by Ki-67staining. The primers for shNotch3 and shNT are provided in Supplementary Materials.
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9

Synthetic miRNA Modulation of Six1 Expression

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Chemical synthesis of miR‐con and miR‐155‐3p mimic was carried out by Ribobio. Plasmid construct harbouring human Six1 was done as per instructions by Genechem. The cDNA of human Six1 was inserted in the pcDNA3 vector, and the recombinant plasmid pcDNA3‐Six1 was generated. Then, seeding was done (2 × 105 cells/well) in 6‐well plates containing complete medium with no antibiotic. After overnight growth, transfection of 100 nmol/L mature miRNA mimics and 7.5 μg plasmids was done for 72 hours into cells along with Lipofectamine 2000 (Invitrogen) as per instructions. The anti‐miR155‐3p or anti‐miR‐con (negative control, anti‐miR) harbouring lentivirus was packaged in 293T cells (human embryonic kidney cells) using the Genechem lentiviral packaging kit for two full days and harvested as per instructions. Transfection of U87 and A172 was done to generate stable cell lines by seeding cells (10 000 cells/well) in 24‐well plates for 24 hours, followed by transfection with lentivirus (0.5 μL; 1 × 108 TU/mL), and then selected on puromycin at 1 μg/mL.
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10

Overexpression of VEGFA in Thyroid Cancer Cells

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The sequence of VEGFA (lacking 3′ untranslated region [UTR]) was amplified and cloned into pcDNA3.1 (Thermo Fisher Scientific) to generate the pcDNA3–VEGFA recombinant plasmid. The recombinant plasmid (10 µg) was transfected into TPC-1 cells using Lipofectamine 2000 transfection reagent (Thermo Fisher Scientific), according to the manufacturer’s instructions. Lentivirus carrying miR-622 or negative control mimic (miR-NC) was packaged into HEK 293T cells using the lentiviral packaging kit (GeneChem, Shanghai, People’s Republic of China), according to the manufacturer’s manual. Stable cell lines were established by infection of TPC-1 with 0.5 µL lentivirus (1×108 TU/mL), followed by puromycin (1 µg/mL) selection.
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