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6 protocols using mca2235

1

Macrophage Profiling in Heart Tissue

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Hearts were removed after perfusion at physiological pressure of saline containing 10% sucrose, embedded in OCT, and frozen. Hearts were sectioned through the aortic root (6 μm) and stained for CD68 (MCA1957; AbD Serotec) to detect macrophages, active-β-catenin (8814; Cell Signaling Technology), STAT3 (8768; Cell Signaling Technology), MRC1 (MCA2235; AbD Serotec), ARG1 (sc-20150; Santa Cruz), VCAM1 (ab134047; Abcam), and CCL2 (505908; BioLegend). Picrosirius red was used for collagen staining, and imaging done using polarizing light microscopy. Image analysis was performed with ImagePro Plus 7.0 software (Media Cybernetics) and ImageJ (National Institute of Health Schneider et al., 2012 (link)).
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2

Immunofluorescence Staining of Frozen Tissue Sections

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Frozen 20-μm sections were post-fixed in acetone and blocked for 1 hour with 3% bovine serum albumin prior to addition of primary antibodies overnight at 4°C. Sources and dilutions of primary antibodies were as follows: rabbit anti-CD31 (endothelial marker, 1:5,000; antisera described previously [35 (link)]), rabbit anti-Collagen IV (basement membrane marker; Millipore, AB7569, 1:1000), rabbit anti-Collagen I ¾ fragment (US Biologicals, catalog no. 207128), mouse anti-iNOS-FITC (BD Biosciences, 610330, 1:100), rabbit anti-CA9 (hypoxia marker; Abcam, ab15086, 1:3000), rat anti-CD206/MRC1-PE (M2 marker; Serotec, MCA2235, 1:50), rabbit anti-Granzyme B (cytotoxic activity marker; Abcam, ab4059, 1:200), and rabbit anti-Ki67 (proliferation marker; Abcam, ab15580). Detection of unconjugated antibodies was achieved using Alexa Fluor488-conjugated goat anti-rabbit secondary antibody staining (1:200) for 60 min at room temperature (DAPI was also included to detect cell nuclei, 1:400).
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3

Liver Tissue Immunofluorescence Staining Protocol

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IF staining was performed according to previous studies (Chen et al., 2020; Dou et al., 2020). Briefly, air‐dried cryosections of liver specimens were permeabilized by 0.3% Triton X‐100 (Sigma‐Aldrich, USA) for 20 min, blocked in 5% serum (Sigma‐Aldrich, USA) for 30 min, and probed with the primary antibodies overnight at 4℃. The primary antibodies used were as follows: anti‐F4/80 (ab6640, Abcam, UK; diluted at 1:200), anti‐CD11b (101201, Biolegend, USA; diluted at 1:100), anti‐tumour necrosis factor‐alpha (TNF‐α) (NBP1‐19532, Novus Biologicals, USA; diluted at 1:100), anti‐CD206 (MCA2235, Bio‐Rad Laboratories, USA; diluted at 1:100) and anti‐chemokine (C‐C motif) ligand 2 (CCL2) (14‐7096‐81, Invitrogen, USA; diluted at 1:100). After primary antibody incubation, sections were washed for 3 times with PBS and incubated with appropriate Alexa Fluor‐conjugated secondary antibodies (Molecular Probes, USA) for 1 h at room temperature. Then, sections were washed for 3 times with PBS and nuclei were counterstained with Hoechst 33342 (Sigma‐Aldrich, USA). Photographs were taken by a confocal microscope (FV1000, Olympus, Japan) and analyzed using the ImageJ software.
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4

Isolation and Characterization of Spinal Cord Immune Cells

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Single-cell suspensions were obtained as same as before [18 (link)]. The spinal cord was removed from the spinal cord tissue by inflating, and the tissue was gently ground into single-cell suspension by using the plunger of a syringe through a 45-micron nylon net. Then the dissociation was performed in cells by Percoll (Amersham Pharmacia Biotech, Piscataway, NJ, USA) gradient centrifugation. Different fluorescent labeled antibodies were implemented to identify different immune cell subtypes (CD68, M0876, Dako; CD206, MCA2235, Bio-Rad). After incubation at 4°C for 30 min, the cells were washed three times with 0.01 M PBS (pH7.4), fixed with 1% PFA, and detected via BD Accuri flow cytometry (Becton Dickinson, San Diego, CA). Finally, the cell subsets were analyzed via FlowJo 7.6.1 software (TreeStar Inc., Ashland OR).
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5

Quantification of Macrophage Subsets

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Grafted arches were removed after perfusion with 10% sucrose in saline, and embedded in optimum cutting temperature (OCT, Tissue-Tek; Sakura Finetek USA) block and freezed. Serial sections at (6 μm thick) were cut and stained for CD68 (Bio-Rad MCA1957) and CD206, also known as Mannose Receptor (MR) (Bio-Rad MCA2235). Negative controls were performed using an isotype control (Rat IgG2a) instead of the primary antibody (Abcam ab18450). ImagePro Plus 7.0 software was used to determine CD68+ and MR+ areas. Overlay was done using Adobe Photoshop CC2018.
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6

Immunolabeling of brain slices

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Vibratome-sectioned brain slices (40 µm thick) were immunolabeled with Iba1, AT8, and/or CD206 (Biorad, MCA2235) antibodies using standard protocols for free-floating sections in multi-well plates. Sections were mounted using PermaFluor and #1.5 coverglass. Using a Leica SP8 confocal microscope equipped with HyD detectors and an AOBS, samples were first visualized using Navigator function to acquire an overview image of each slice using a 20× water-immersion lens (0.95 NA). From the mosaic image, smaller tiled-ROIs were marked in the forebrain and hindbrain to acquire high-resolution, sequential-scanned image stacks using a 63× water-immersion lens (1.2 NA). Eight-bit image z-stacks (1 μm steps) were collected at 512×512-pixel resolution. Images were processed using custom MATLAB code.
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