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2 protocols using 5 aza decitabine

1

Lentiviral Vector Construction and Transfection

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Both 5-aza (Decitabine) and MK2206 2HCl were purchased from Selleck Chemicals (Shanghai, China). The skeleton plasmid of lentiviral vectors Flag-vIL-6, His-vIL-6, Flag-STAT3, and Flag-STAT3-K685R was pHAGE-CMV-MCS-IzsGreen (pHAGE for short). pHAGE contains ZsGreen fluorescent coding sequence, which can display fluorescence similar to that produced by green fluorescent proteins in cells. All the shRNAs were constructed into the modified pCDH (named as mpCDH), a new lentiviral plasmid generated in our previous study [32 (link)]. HEK293T cells were cotransfected with lentiviral plasmids, packaging plasmid psPAX2, and pseudotyping pMD2.G using Lipofectamine 2000 Reagent (Invitrogen, Carlsbad, CA, USA) as previously described [10 (link), 55 (link), 56 (link)].
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2

Molecular Mechanisms of Epigenetic Regulation

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HUVECs were transfected using the Effectence transfection reagent (Qiagen, Suzhou, Jiangsu, China), while HEK293T cells were transfected using the Lipofectamine 2000 Reagent (Invitrogen, Carlsbad, CA, USA). 5-aza (Decitabine), a potent inhibitor of DNA methylation, was from Selleck Chemicals (Shanghai, China). siRNAs were synthesized from Genepharma (Suzhou, China), the sequences of siRNAs are listed in S1 Table. LncRNA Smart Silencer was obtained from RiboBio (Guangzhou, China). Antibodies against KSHV LANA, HMGB2, CMPK1, DNMT1 and Dicer were from Abcam (Cambridge, MA, USA). Anti-Flag was obtained from Cell Signaling Technologies (Beijing, China). Anti-Myc, anti-α-Tubulin, and anti-GAPDH were from Santa Cruz Biotechnology (Dallas, TX, USA). Anti-rabbit immunoglobulin G (IgG), anti-mouse IgG, anti-phosphorylated p53, anti-acetylated p53, anti-p53, and anti-p21 were purchased from Beyotime Institute of Biotechnology (Nantong, Jiangsu, China). Western-blotting analysis was conducted as previously described [81 (link), 82 (link)]. In this study, all Western blotting results were independently repeated at least three times unless otherwise stated.
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