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3 protocols using anti beta actin

1

Profiling Antigen Presentation Machinery

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The protein concentration of each fraction was measured by a Bradford protein assay. An amount of 5 µg protein of each fraction was separated on 10% polyacrylamide gels at 40 mA per gel for 2 h and were blotted onto nitrocellulose membranes by semi-dry Western blot at 180 mA per membrane for 1 h. Membranes were blocked in 5% skim milk powder in TBS-T, incubated with the indicated primary antibody solution (in TBS-T supplemented with 5% BSA and 0.1% sodium azide) at 4 °C overnight followed by incubation with corresponding HRP-conjugated secondary antibody solution (in 3% BSA in TBS-T) at RT for 1 h. Proteins were visualized with ECL Detection Reagents (GE Healthcare, Chicago, IL, USA). The antibodies used were anti-beta Actin (MP, Irvine, CA, USA), anti-Tapasin, anti-beta2-Microglobulin, anti-ERp57, anti-Calreticulin (all Abcam, Cambridge, UK), anti-Yes (BD Bioscience), anti-Flotillin1, anti-Caveolin1 (Sigma-Aldrich, Seelze, Germany), anti-TAP1 (Novus Biologicals, Cambridge, UK), anti-TAP2 (MBL, Woburn, MA, USA), HRP-conjugated goat anti mouse and HRP-conjugated goat anti-rabbit (Thermo Scientific, Bonn, Germany).
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2

Antibody Validation for Immunoprecipitation

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The following antibodies were used in this study: anti-FLAG (Clone M2, Sigma-Aldrich, F1804), anti-CUL2 (Bethyl, A302-476A), anti-FNIP1 (Abcam, ab134969), anti-FEM1B (Proteintech, 19544-1-AP), anti-beta-ACTIN (MP Biomedicals, clone C4, 691001), α-TOMM20 (Sigma-Aldrich, HPA011562), BEX2 Antibody (C-12, Santa Cruz Biotechnology, sc-398486) anti-HA-Tag (C29F4, Cell Signaling Technology (CST), 3724), anti-FLAG DYKDDDDK Tag (CST, 2368), and anti-NRF2 (D1Z9C, CST, 12721). For the endogenous 3xFLAG-FEM1B immunoprecipation, as BEX2 runs close to the antibody light chain, we used Peroxidase AffiniPure Goat Anti-Mouse IgG, Fcγ fragment specific (Jackson ImmunoResearch Laboratories, 115-035-008)
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3

Antibody Panel for Cellular Analysis

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The following antibodies were used in this study: anti-Flag (Clone M2, Sigma-Aldrich, F1804), anti-CUL2 (Bethyl, A302-476A), anti-FNIP1 (Abcam, ab134969), anti-FNIP1 (Abcam, 215725), anti-GFP (Abcam, ab6556), anti-FEM1B (Proteintech, 19544-1-AP), anti-MYOSIN, SARCOMERE (MHC) (Developmental Studies Hybridoma Bank, M20), anti-MYOGENIN (Developmental Studies Hybridoma Bank, F5D) anti-beta-ACTIN (MP Biomedicals, clone C4, 691001), a-TOMM20 (Sigma-Aldrich, HPA011562), anti-HA-Tag (C29F4, Cell Signaling Technology (CST), 3724), anti-Flag DYKDDDDK Tag (CST, 2368), anti-FLCN (D14G9, CST, 3697), anti-KEAP1 (D6B12, CST, 8047), anti-NRF2 (D1Z9C, CST, 12721), anti-CITRATE SYNTHASE (D7V8B, CST, 14309), anti-GAPDH (D16H11, CST, 5174), anti-Phospho-AMPKa (Thr172) (40H9, CST, 2535), anti-AMPKa (D5A2, CST, 5831), anti-Phospho-p70 S6 KI-NASE (Thr389) (108D2, CST, 9234), anti-p70 S6 KINASE (49D7, CST, 2708), anti-Phospho-Acetyl-CoA CARBOXYLASE (Ser79) (CST, 3661) , and anti-Acetyl-CoA CARBOXYLASE (C83B10, CST, 3676).
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