The largest database of trusted experimental protocols

Ccctaa 3 pna probe

Manufactured by Panagene

The CCCTAA)3 PNA probe is a synthetic DNA-like molecule designed for use in molecular biology and genomic research. It consists of a peptide nucleic acid (PNA) sequence that can bind to complementary DNA or RNA sequences. The core function of this probe is to serve as a detection or hybridization tool for specific genetic targets.

Automatically generated - may contain errors

2 protocols using ccctaa 3 pna probe

1

Granulocyte Telomere Length Measurement by Flow-FISH

Check if the same lab product or an alternative is used in the 5 most similar protocols
TL was measured by Flow-FISH, currently considered as the gold standard technique [27 (link)]. The severe lymphopenia of most COVID-19 patients, together with the possible acute infection-driven shortening of telomeres in T lymphocytes, support the measurement of TL in the granulocytes rather than the lymphocytes. To confirm that granulocyte TL properly reflects lymphocyte TL, we compared their respective percentile ranges for individuals of the cohort. We found a good consistency between the two cell populations as, for nearly 60% of the individuals of the cohort, the percentile range was the same while, for 33% of them, only one category difference was observed (Supplementary Figure 1). Hence, for the large majority of individuals, granulocyte TL properly reflects lymphocyte TL.
All TL measurements were performed in duplicate in the Cliniques Universitaires Saint-Luc through Flow-FISH as described previously [15 (link)]. After red blood cell lysis with ammonium chloride as described in [15 (link)], white blood cells were frozen at -80° C until analysis. Aliquots of calf thymus were mixed to each sample for internal control. Telomeres were stained with FITC-labelled (CCCTAA)3 PNA probe (Panagene) and fluorescence was measured with a Navios EX flow cytometer (Beckman Coulter).
+ Open protocol
+ Expand
2

Quantifying Telomere Length Using Q-FISH

Check if the same lab product or an alternative is used in the 5 most similar protocols
Telomere lengths were quantified using Quantitative Fluorescent in situ Hybridization (Q-FISH) as previously described. In brief, hTERT/PD-1/CIK cells were harvested at 7 days after hTERT transfection and treated with colcemid for 3 h before added into hypotonic KCl solution and fixed in methanol-acetic acid. Cy-3 labeled (CCCTAA)3 PNA probe (Panagene, Korea) was used to bind the telomere in the end of the chromosome. The fluorescence images of telomeres and chromosomes were obtained using a laser confocal microscope using a 100×oil objective. The relative telomere length was determined by fluorescence intensity using TFL-Telo software. Absolute telomere length was measured using the qPCR method described previously [16 (link)]. Two oligomer standards were introduced to generate the standard curve of telomere and single copy gene. Based on both standard curves, the absolute telomere length was measured using the PCR data.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!