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Cdk9 in 2

Manufactured by MedChemExpress

CDK9-IN-2 is a potent and selective inhibitor of cyclin-dependent kinase 9 (CDK9). CDK9 is a key regulator of transcription elongation and plays a crucial role in the regulation of gene expression.

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2 protocols using cdk9 in 2

1

Inhibitors Targeting ALK, PARP, CDK9 in Cancer

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Anti-neoplastic agents used in the present study, including talazoparib (PARP inhibitor), lorlatinib (ALK inhibitor), ceritinib (ALK inhibitor), cisplatin and CDK9-IN-2 (CDK9 inhibitor), were purchased from MedChemExpress. The following antibodies were used for WB: anti-p-ALK (1:500), anti-CDK9 (1:2,000), anti-p-Thr186 CDK9, (1:2,000), anti-p-Rpb1 CTD (1:2,000), anti-cyclin T1 (1:1,000), anti-FLAG tag (1:2,000), anti-PARP (1:1,000), anti-BRD4 (1:2,000), anti-RAD50 (1:3,000), anti-Lamin B1 (1:3,000), anti-BRCA1, anti-CtIP (1:500), anti-p-Tyr (1:5,000) and anti-BRCA2 (1:1,000). The following antibodies were used for IF: anti-RAD51 (1:250) and anti-phospho-histone H2A.X (1:200). The following antibodies were used for IHC: anti-p-ALK (1:200), anti-RAD51 (1:1,000), anti-CtIP (1:10), anti-p-RPA32 (1:100) and anti-p-Tyr19-CDK9 (1:10). Mouse monoclonal antibody against the phosphorylation site of CDK9 at Tyr19 was produced by our lab with a synthetic phosphopeptide: DEVSKP-pY-EKLAKIGQTFGE.
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2

Kinase Inhibitors in 3D Spheroid Assays

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Kinase inhibitors specific to individual kinase targets identified by MIB-MS were further tested for growth inhibition of the 3D spheroids. This included inhibitors of CDK9, CLK4, CSNK1δ/ε, and AURKA kinases. The inhibitors used were CDK9-IN-2 (MedChem Express, Monmouth Junction, NJ, cat. HY-16462), ML167 (Selleckchem, Houston, TX, cat. S7509), PF 670462 (Tocris, Minneapolis, MN, cat. 3316), and Alisertib (ApexBio, Hsinchu City, Taiwan, cat. A4110), respectively. MiaS and MiaR co-culture spheroids were incubated with each of these kinase inhibitors at a variety of concentrations, and cell viability was analyzed using CellTiter-Glo 3D and a PHERAStar plate reader.
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