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The IEC-6 is a compact, benchtop centrifuge designed for general laboratory applications. It is capable of processing a variety of sample sizes and types, including microtubes, blood collection tubes, and small-volume containers. The IEC-6 features a brushless motor for quiet operation and provides adjustable speed and time controls to meet the specific needs of various centrifugation protocols.

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63 protocols using iec 6

1

Intestinal Epithelial Cell Lines: Cultivation and Stimulation

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The intestinal epithelial cell lines including HT29, SW620, SW480, LoVo, HCT116, Caco‐2 and IEC‐6 were purchased from American Type Culture Collection, and cultured routinely in RPMI 1640 (HT29, SW620, SW480, LoVo and HCT116) or DMEM (Caco‐2 and IEC‐6) medium respectively, supplemented with 10% or 20% FBS at 37°C in 5% CO2. Cultured or transfected cells were incubated with 1 μM PMA for 15 min. or 1 μg/ml LPS from E. coli for 24 hrs, then processed as follows.
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2

Murine Colorectal Carcinoma Cell Lines

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The murine colorectal carcinoma cell lines CT26 (ATCC CL-2638) and IEC6 (ATCC CRL-1592) were obtained from the American Type Culture Collection [(ATCC), with authentication by short tandem repeat] and maintained in complete medium as described previously (23 (link)). Cell lines were routinely characterized in the laboratory based on morphology and gene-expression patterns. Cells were confirmed to be free of mycoplasma contamination using a mycoplasma detection kit (Thermo Fisher Scientific, Waltham, MA, USA). Cells were maintained with RPMI-1640 medium (Corning Cellgro, Manassas, VA, USA) supplemented with 10% heat-inactivated fetal bovine serum (Corning Cellgro) in a 5% CO2 atmosphere at 37°C.
Surgically resected tumor and normal colon from three individual patients were obtained through the University of Kansas Medical Center Biospecimen Repository.
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3

Cell Culture Protocol for Colon and Intestinal Cells

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Human colon cancer cells (ATCC HTB-38) and rat small intestine epithelial cells (IEC-6, ATCC CRL-1592) were purchased from the American Type Culture Collection (ATCC; Rockville, MD, USA). The cells were maintained in a humidified 5% CO2, 95% air, 37°C environment in Roswell Park Memorial Institute (RPMI)-1640 medium. Dulbecco’s modified Eagle’s medium (DMEM) was supplemented with penicillin/streptomycin (P/S), and HT-29 and IEC-6 cell cultures were supplemented with 10% fetal bovine serum (FBS; HyClone, Inc., South Logan, UT, USA). Cells were cultured to 80% confluency in 100-mm dishes. The medium was replaced every 2 days.
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4

Canonical Wnt Pathway Inhibition Assay

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HEK293T, SW480, HCT116, DLD-1, and IEC-6 cell lines were purchased from ATCC and RKO-pBAR/Renilla and SW480-pBAR/Renilla were a gift from Professor Xi He (Harvard Medical School). All cell lines were maintained in DMEM-F-12 (Gibco, Life Technologies Limited, Paisley, UK) enriched with 10% fetal bovine serum (Gibco). The chalcone lonchocarpin was purified by Nascimento and Mors, 1972 [50 (link)] and kindly donated for this study by professor Ricardo Kuster (Federal University of Espirito Santo). PNU-74654 was synthesized at the Laboratory of Evaluation and Synthesis of Bioactives substances (Biomedical Sciences Institute, UFRJ). Both compounds were diluted in DMSO (Sigma-Aldrich, Saint Louis, MO, USA) at the concentration of 10 mM. PNU-74654 has been previously described as an inhibitor of Wnt/β-catenin pathway by blocking the interaction between β-catenin and TCF [30 (link)]. L-cell conditioned medium (CM) and Wnt3a CM were obtained according to the ATCC protocol. L-cells and L-Wnt3a cells were plated into 75 cm2 flasks at 50% confluence with 10 mL DMEM medium containing 10% FBS. After 4 days, the first batch of medium was obtained and kept at 4 °C. Three days later, the last batch of medium was obtained and combined with the first one. Finally, L-cell CM and Wnt3a CM were passed through a 0.22 μm filter, and kept at 20 °C.
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5

Wnt Signaling Modulators in Cell Lines

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All cell lines were maintained in DMEM F12 culture medium supplemented with 10% fetal bovine serum and 100U/mL and 100 µg/mL penicillin/streptomycin (Gibco, Life Technologies Carlsbad, CA, USA) at 37 °C and 5% CO2. Dimethylsulfoxide (DMSO), anti-β-catenin and anti-α-tubulin were purchased from Sigma-Aldrich (St. Louis, MO, USA). Secondary antibodies were purchased from Life Technologies (CA, USA). Cell lines used were HEK293T, L-cell, L-Wnt3a, HCT116, DLD-1, SW480 and IEC-6 (ATCC). Wnt signalling reporters cell lines, RKO pBAR/Renilla and SW480-pBAR/Renilla were a kindly donated by Dr. Xi He (Boston Children´s Hospital). The alkaloid piperine used in this study was extracted from Piper nigrum, purified and identified at Research Institute for Natural Products in the Federal University of Rio de Janeiro (IPPN-UFRJ-Brazil).
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6

Evaluating Inflammatory Pathways in Rat IEC-6 Cells

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Immortalized rat intestinal epithelial cells (IEC-6) were purchased from ATCC (CRL-1592) was maintained in high glucose Dulbelcos modified eagles medium (DMEM), Corning (Tewksbury, MA) supplemented with 10% fetal bovine serum (FBS), Atlanta biologicals (Norcross, GA) suplimented with 2 mM glutamine, 0.1 U/ml Insulin, 100 U/ml Penicillin, and 100 μg/ml streptomycin; Gibco (Grand Island, NY) at 37 °C in a humidified atmosphere of 5% CO2. The cells were then treated with recombinant rat HMGB1 (Mybiosource. San Diego, CA) 30 ng/ml a cytokine mediator of inflammation released by activated macrophages able to bind to and activate RAGE & TLR4, Apocynin (Sigma-Aldrich) 100 µM an inhibitor of NADPH oxidase activity and thus preventing production of superoxide, RAGE antagonist (FPS-ZM1, Milipore, MA) 200 nM V-domain ligand binding RAGE inhibitor, Peroxynitrite (Cayman Chem, Ann Arbor, MI) 300 µM a highly reactive structural isomer of nitrate, Phenyl Boronic Acid (FBA) (Sigma Aldrich) 100 µM was used as a scavenger for Peroxynitrite, PI3K inhibitor (LY294002, Sigma Aldrich) 10 µM as an inhibitor for AKT phosphorylation as required.
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7

SIRT1 Knockdown in Intestinal Epithelial Cells

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The cell lines small intestinal epithelial cells (IEC-6) of SD female rats were purchased from ATCC cell bank. The IEC-6 cells were cultured according to the supplier’s recommendations. The IEC-6 cells were cultured in Dulbecco’s modified eagle medium (DMEM) supplemented with 10% fetal bovine serum, 1% penicillin/streptomycin, and 0.1 U/ml bovine insulin as described. SIRT1 was knocked down by siRNA in IEC-6 cells according to the manufacturer’s instructions. IEC-6 cells were seeded in 6-well plates, and then a specific SIRT1 siRNA and control negative (NC) siRNA were transfected with Lipofectamine RNAiMAX. After 48 h, total RNA of cells was extracted for qPCR detection.
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8

Culturing Rat Intestinal Epithelial Cells

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Rat intestinal epithelial cell-6 (IEC-6; ATCC, Manassas, VA, USA) was cultured in a 1640 medium in an incubator with 5% CO2 and constant humidity at 37°C. After the cells grew by more than 95%, they were washed with phosphate-buffered saline (PBS), trypsinized, and observed under a microscope. The medium was added to terminate digestion when the cells appeared to be rounded. These cells were divided into three flasks and subcultured. When they grew well, those in the logarithmic growth phase were used for subsequent experiments.
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9

MTT Assay for IEC-6 Cell Viability

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The intestinal epithelial cell line, IEC-6, was obtained from ATCC (Rockville, MD, USA), which was cultured in DMEM mixed with 10% FBS. After LPS irritation and the corresponding vector transfection, the disposed IEC-6 cells were collected and inoculated into 96-well plates. After 24 h culture, cells were reacted with 20 μL MTT solution (5 mg/mL, Sigma, St. Louis, MO, USA) for an extra 4 h. When terminating the incubation, 150 μL DMSO (4%, Sigma) was used to accelerate the crystal dissolution. After accomplishing these procedures, a microplate reader (BioTek, Winooski, VT, USA) was applied to test the absorbance at 570 nm.
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10

Rat Small Intestinal Cell Culture Protocol

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IEC-6 (ATCC Cat# CRL-1592, RRID: CVCL_0343) rat small intestinal cells were purchased from ATCC and were maintained in DMEM-HIGH GLUCOSE medium (Gibco), containing 10% fetal bovine serum and 1% penicillin/streptomycin (Gibco) in a humidified 5% CO2 atmosphere at 37 °C. After the cells had grown to confluence, they were replated onto 12-mm round coverslips (Warner Instruments Inc) and incubated for at least 24 h before use for intracellular Ca2+ measurement or immunostaining.
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