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3 protocols using mini trans blot cell and criterion blotter

1

Bacterial Protein Extraction and Analysis

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We extracted the bacterial protein with NP40 lysis buffer (50 mM Tris, pH 8.5, 150 mM NaCl, 1% NP40) with protease inhibitor cocktail VII (Research Product International, Mt. Prospect, IL, USA) and performed SDS-PAGE with 50 μg/lane of proteins in 7.5 or 12% acrylamide gel. Then, some gels were stained directly with GelCodeBlue Stain Reagent (Thermo Fisher) and others were transferred to nitrocellulose membranes (Bio-Rad, Hercules, CA, USA) using Mini Trans-Blot Cell and Criterion Blotter (Bio-Rad). Efficiency of the transfer was confirmed by a brief staining of the membranes with Ponceau S solution. Expression levels of the proteins in bacteria were evaluated by western blotting with specific antibodies. Primary antibodies used in the immunoblotting are summarized in Table 1. Secondary antibody (HRP-conjugated anti mouse IgG) was obtained from Cell Signaling Technologies (#7076, Danvers, MA, USA) and used in 2000 times dilution. Western blots with chemiluminescence (SuperSignal West Pico PLUS; Thermo Fisher) were developed by ChemiDoc Imager (Bio-Rad) and then analyzed using Image Lab software (Bio Rad).
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2

Quantifying CD31 Protein Levels in Mouse Ovaries

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Protein samples obtained from mouse ovaries were incubated with PRO-PREPTM Protein Extraction Solution (iNtRON Biotechnology, Seongnam, South Korea). Twenty micrograms of proteins were separated using 10% sodium dodecyl-sulfate polyacrylamide gel electrophoresis and transferred to a polyvinylidene difluoride membrane using a Mini Trans-Blot cell and criterion blotter (Bio-rad, Hercules, CA, USA). After blocking with 5% skim milk in 1× TBST with 0.1% Tween 20 (Sigma-Aldrich) at room temperature for 1 hour, the blots were probed at 4°C overnight with a 1:300 dilution of anti-CD31 primary antibodies (BS-0195R; Bioss, Woburn, MA, USA) and a 1:1000 dilution of anti-β-tubulin (s2128; Cell Signaling Technology, Danvers, MA, USA). This was followed by incubation in a 1:2000 dilution of mouse anti-rabbit IgG secondary antibody (sc-2357; Santa Cruz Biotechnology, Dallas, TX, USA) at room temperature for 1 hour. Band intensity was quantified using Image J and normalized to β-tubulin band intensity.
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3

Western Blot Protein Quantification Protocol

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Protein levels were analyzed using western blot. Briefly, cells were harvested and washed with 1× phosphate buffered saline and lysed in a lysis buffer (RIPA buffer), Na-vanadate (1 mM), β-glycerol phosphate (50 mM), protease inhibitor (cat#786-108, G-biosciences, St. Louis, MO), EDTA (5 mM), β-mercaptoethanol (cat#41300000-1, 142 mM, BioWORLD, Dublin, OH). The cell lysate was mixed with 5× sample buffer and the mixture was boiled at 100°C for 10 min. Subsequently, the samples were loaded on 12% and 15% polyacrylamide gels. Proteins were transferred to membranes using Mini Trans-Blot Cell and Criterion Blotter (Bio-Rad, Hercules, CA) and the membranes were blocked in 1% BSA (bovine serum albumin, cat#160069, MP Biomedicals, Santa Ana, CA) dissolved in Tris-buffered saline containing 0.1% Tween 20 (TBST). The membranes were probed by indicated primary antibodies and incubated on a rotator at 4°C overnight. Then, the membranes were washed for 5 minutes in TBST and treated with anti-mouse or -rabbit secondary antibodies for 1 hour at room temperature. After washing three times for 10 minutes each with TBST, proteins were detected using a chemiluminescent substrate (EZ west Lumi Plus, ATTO, Tokyo, Japan) and visualized on a chemiluminescence Imaging system (Luminograph II, ATTO).
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