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7 protocols using accurate mass q tof ms 6520 system

1

Spectroscopic Characterization of Natural Products

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Optical rotations were measured with a Perkin-Elmer 241 polarimeter. The UV spectra were conducted on a Shimadzu UV-2201 spectrometer. ECD spectra were recorded on a JASCO J-815 spectrometer. HRESIMS were recorded on Agilent Accurate-Mass-Q-TOF MS 6520 system equipped with electrospray ionization (ESI) source. NMR spectra were recorded on a Bruker AV-600 NMR spectrometer using TMS as an internal standard. The chromatographic silica gel (200–300 mesh) and polyamide (100–200 mesh) were purchased from Qingdao Marine Chemical Factory (Qingdao, China) and ODS (50 μm) was produced by YMC Co. LTD., Kyoto, Japan. Sephadex LH-20 was purchased from GE Healthcare. RP-HPLC separations were conducted using a Shimadzu LC-20AT liquid chromatograph with a YMC-PACK ODS-A column (250 × 10 mm, 5 μm) and Knauer K-2600 UV detector. Chiral separation was conducted in a Daicel AS-H column (250 × 4.6 mm, 5 μm) from Daicel Chemical Industries, Ltd. (Japan). TLC spots were visualized under UV light and by dipping into 10% H2SO4 in EtOH followed by heating. RAW 264.7 cells, human chronic myelogenous leukemia (K562) and human lung carcinoma (A549) cell lines were obtained from National infrastructure of cell line resource.
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2

Detailed Analytical Techniques Protocol

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Commercial reagents were obtained from J&K (Beijing, China), Alfa Aesar (Ward Hill, MA, USA) and Sigma-Aldrich (St. Louis, MO, USA). Deionized water was purified with a Milli-Q Plus System from Millipore (Billerica, MA, USA) was used throughout all experiments. Nuclear magnetic resonance (NMR) spectra were recorded with a 600-MHz spectrometer (Agilent Technologies, Inc., Santa Clara, CA, USA). Mass spectra were recorded with a UPLC/XevoTQ MS/MS spectrometer (Waters, Milford, MA, USA) and an Agilent Accurate-Mass-Q-TOF MS 6520 system equipped with an Electrospray ionization (ESI) source. Reactions were stirred magnetically and monitored by thin-layer chromatography (TLC). Flash chromatography was performed using silica gel 60 (200–300 mesh). UV-Vis spectra were recorded with a UV-1800 spectrophotometer (Shimadzu, Kyoto, Japan), with quartz (1-cm path length). All fluorescence measurements were performed on a 970CRT fluorescence spectrophotometer (Inesa, Shanghai, China) equipped with a xenon lamp source. All pH values were measured with a PHS-25 digital pH meter (Shanghai REX Instrument Factory, Shanghai, China).
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3

Spectroscopic Characterization of Compounds

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1H NMR and 13C NMR spectra were recorded on a Bruker Avance DPX 300 MHz instrument (Bruker, Billerica, MA 01821-3991, USA), TMS as the internal standard. 1H NMR data are reported as follows: chemical shift, multiplicity (s = singlet; d = doublet; q = quartet; m = multiplet; br = broad), coupling constant (Hz), and integral. Data for 13C NMR spectra are reported in terms of chemical shift. Mass spectrometric data were obtained on Agilent Accurate-Mass-Q-TOF MS 6520 system equipped with an Electrospray ionization (ESI) source (Agilent, Santa Clara, CA 95051, USA). Specific rotations were obtained on a High Accurary Polarimeter Rudolph Autopl VI (Rudolph, Wilmington, Massachusetts 01887, USA). Toluene and DCM were freshly distilled after dried by calcium hydride under nitrogen, diethyl ether and THF were freshly distilled after dried by Lithium aluminum hydride. Unless otherwise stated, all reagents were commercially available and were used without purification. Organic solutions were concentrated under reduced pressure on a rotary evaporator or an oil pump. Reactions were monitored through thin layer chromatography (TLC) on silica gel-precoated glass plates (0.25 mm thickness, SiliCycle silica gel). Flash column chromatography was performed using Qingdao Haiyang flash silica gel (200–300 mesh).
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4

Comprehensive Analytical Techniques for Natural Products

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Optical rotations were acquired on a JASCOP-1020 polarimeter. ECD data were measured on a Chirascan spectropolarimeter. IR spectra were measured on PerkinElmer infrared spectrophotometer. 1D and 2D NMR spectra were recorded on Bruker Avance 400 or 600 DRX spectrometers in acetone-d6, methanol-d4, DMSO-d6 and chloroform-d. Column chromatography (CC) was performed on silica gel (200300 mesh; Qingdao Marine Chemical Plant Branch., China), RP-C18 (ODS-A, 50 μm, YMC, Kyoto, Japan), or Sephadex LH-20 (100–200 mesh; Beijing Solarbio Technology Co., Ltd., China). Plates precoated with silica gel GF254 (Rushan, Shandong Sun Desiccant Co., Ltd.) were used for thin layer chromatography (TLC). An Agilent HPLC series 1260 and Shimadzu LC-20AR were used for analysis and isolation. For analysis, an Agilent Eclipse XDB-C18 column (4.6 × 150 mm, 5 μm) was used. The isolation was achieved on an Agilent semi-preparative Eclipse XDB-C18 column (9.4 × 250 mm, 5 μm). HPLC-MS data were acquired on an Agilent 1260 Series system coupled with an Agilent Accurate-Mass-Q-TOF MS 6520 system equipped with an Electrospray ionization (ESI) source.
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5

Synthesis and Characterization of Organic Compounds

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Commercially available compounds were used without further purification. Solvents were dried according to standard procedures. Column chromatography was performed with silica gel (200–300 mesh). The melting points were determined with an XT-4 melting point apparatus and were not corrected. 1H NMR spectra were measured with a Bruker Ascend 400 MHz spectrometer (Karlsurhe, Germany) and the chemical shifts were reported in δ (ppm) relative to tetramethylsilane (TMS) as the internal standard. 13C NMR spectra were measured at 100 MHz with a 400 MHz spectrometer, and the chemical shifts were reported in ppm relative to tetramethylsilane and referenced to the solvent peak (CDCl3, δC = 77.00 ppm; CD3OD, δC = 49.05 ppm; acetone-d6, δC = 30.83 ppm). High-resolution mass spectra were measured with an Agilent 6520 Accurate-Mass Q-TOF MS system (Beijing, China), equipped with an electrospray ionization (ESI) source. Optical rotations were measured with a Krüss P8000 polarimeter (Beijing, China) at the indicated concentration with units of g/100 mL. Enantiomeric excesses were determined by chiral HPLC analysis, using an Agilent 1200 LC instrument (Beijing, China) with a Daicel Chiralpak IA, IB, IC, or AD-H column.
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6

Synthesis and Characterization of Chiral Organocatalysts

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Commercially available compounds were used without further purification. Solvents were dried according to standard procedures. Column chromatography was performed with silica gel (200–300 mesh). Melting points were determined with an XT-4 melting-point apparatus and are uncorrected. 1H NMR spectra were measured with a Bruker Ascend 400 MHz spectrometer, chemical shifts are reported in δ (ppm) units relative to tetramethylsilane (TMS) as an internal standard. 13C NMR spectra were measured at 100 MHz with a 400 MHz spectrometer or at 176 MHz with a 700 MHz spectrometer, chemical shifts are reported in δ (ppm) units relative to tetramethylsilane and referenced to solvent peak (CDCl3, δ = 77.00 ppm; DMSO-d6, δ = 39.43 ppm). High-resolution mass spectra were measured with an Agilent 6520 Accurate-Mass Q-TOF MS system equipped with an electrospray ionization (ESI) source. Optical rotations were measured with a Krüss P8000 polarimeter at the indicated concentration with the units of g/100 mL. Enantiomeric excesses were determined by chiral HPLC analysis using an Agilent 1200 LC instrument with a Daicel Chiralpak IB, IC, or ADH column.
The following compounds were prepared following procedures reported in the literature: 1ag [15 (link)], 2ao [34 (link)], and chiral organocatalysts [35 (link)–38 (link)].
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7

Detailed Characterization of Organic Compounds

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Commercially available compounds were used without further purification. Solvents were dried according to standard procedures. Column chromatography was performed with silica gel (200~300 mesh). Melting points were determined with an XT-4 melting-point apparatus and were uncorrected. 1H NMR spectra were measured with Bruker Ascend 400 MHz spectrometer; chemical shifts were reported in δ (ppm) units relative to tetramethylsilane (TMS) as internal standard. 13C NMR spectra were measured at 100 MHz with 400 MHz spectrometer; chemical shifts were reported in ppm relative to tetramethylsilane and referenced to solvent peak (CDCl3, δ C = 77.00). High-resolution mass spectra (Electron spray ionization) were measured with an Agilent 6520 Accurate-Mass Q-TOF MS system equipped with an electrospray ionization (ESI) source. Optical rotations were measured with a Krüss P8000 polarimeter at the indicated concentration with the units of g/100 mL. Enantiomeric excesses were determined by chiral HPLC analysis using an Agilent 1200 LC instrument with a Daicel Chiralpak IA, IC, or ADH column. 1H and 13C NMR spectra for newly synthesized compounds, X-ray single crystal data for product 3ja and copies of the HPLC chromatograms can be found in the Supplementary Materials.
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