The largest database of trusted experimental protocols

13 protocols using leica asp300

1

Intestinal Morphometry Analysis Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
The method described by Daneshmand et al.59 (link) was used to prepare samples for morphometry analysis. In summary, jejunal and ileal samples were stored in a 10% formaldehyde phosphate buffer for 48 h. Then, the samples were trimmed and processed on a tissue processor (Excelsior™ AS, Thermo Fisher Scientific, Loughborough, UK), fixed in paraffin using an embedder (Thermo Fisher Histo Star Embedder, Loughborough, UK) and cut with a microtome (Leica HI1210, Leica Microsystems Ltd., Wetzlar, Germany) to a slice of 3 μm, placed on a slide and dehydrated on a hotplate (Leica ASP300S, Leica Microsystems Ltd., Wetzlar, Germany). Then, the prepared samples were dyed with hematoxylin and eosin and examined under a microscope (Olympus BX41, Olympus Corporation, Tokyo, Japan). A total of 8 slides were prepared from the jejunal segment per bird, and 10 individual well-oriented villi were measured per prepared slide (80 villi/bird). The average of slide measurements per sample was stated as a mean for each bird. Villus width (VW) was measured at the base of each villus; villus height (VH) from the top of the villus to the villus-crypt junction, crypt depth (CD) from the base of the adjacent villus to the sub-mucosa, the ratio of VH to CD and villus surface area were calculated.
+ Open protocol
+ Expand
2

Immunostaining of Cell and Tissue Samples

Check if the same lab product or an alternative is used in the 5 most similar protocols
Dissociated cells were casted on a glass slide at a spinning rate of 1000 rpm for 3 min. For cultured cells, they were seeded on 8 well-chamber slide. Cells were fixed with 4% paraformaldehyde (PFA) diluted with PBS for 15 min. For porcine pancreas, tissue specimen was fixed in formalin overnight and then dehydrated and paraffin-embedded in a tissue processor (Leica ASP300S, Leica Microsystems, Glattbrugg, Switzerland); 6 μm sections were cut on a microtome (Leica RM2255). Sections were dewaxed in xylol and rehydrated in a descending series of ethanol solution (99%, 95%, 90%, 80%, 70%, and water) prior to the performance of antigen retrieval in citrate buffer 0.01 M pH 6.0. For immunostaining, cell slides/sections were permeabilized in 2.0% Triton X100 for 3 min and blocked for 15 min at room temperature with protein block solution (X0909, Dako). The cell slides/sections were incubated with the first antibody for one hour and with the second antibody for 45 min at room temperature. The nuclei of cells were stained with DAPI mounting solution (H-1200, Vector Labs.). The primary antibodies used were monoclonal anti-insulin (I2018, Sigma) and the secondary antibodies was horse anti-mouse IgG Texas Red (Vector Labs.). The cell slides/sections were examined using Leica fluorescent microscope, model DMI54000B with a QImaging Retiga-2000RV camera.
+ Open protocol
+ Expand
3

Histological Analysis of Pancreatic Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Pancreata were removed and fixed in 4% paraformaldehyde. Tissue was embedded in paraffin using an automated vacuum tissue processor Leica ASP300S (Leica Microsystems Inc., Bannockburn, IL). Tissue sections of 8 μm thickness were cut on a RM2255microtome (Leica Microsystems Inc.) and mounted directly on Superfrost/Plus microscope slides (Fisher, Pittsburgh, PA, #12-550-12). Slides were dried at +40°C overnight in and stored at +4°C.
Paraffin embedded sections were deparaffinized/rehydrated in xylene followed by ethanol and PBS serial rehydration. Antigen retrieval was completed in a steamer using 0.01M citrate buffer, pH 6.2, with 0.002M EDTA, for 30 min. Slides were permeabilized in 1% Triton X-100 in PBS for 30 min. Sections were blocked in 10% normal donkey serum (NDS), 1% bovine serum albumin (BSA), and 0.03% Triton X-100.
+ Open protocol
+ Expand
4

Histological Processing and Imaging of Liver Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Liver tissue samples collected during necropsy were fixed in a 10 % buffered formaldehyde solution and paraffin-blocked using a Leica ASP300S autotechnicon (Leica Microsystems, Wetzlar, Germany). After 4–5 hours of cooling, we cut them into 5 µm thick serial slices with a rotary microtome (Leica 2155), stained with haematoxylin-eosin (Surgipath, Deer Park, IL, USA), and covered with entellan for examination under a light microscope (Olympus CX21, Olympus Co., Tokyo, Japan). Images were taken with a digital camera (Olympus DP74) and processed using Cell Sens imaging software (Olympus Co., Tokyo, Japan).
+ Open protocol
+ Expand
5

Morphometric Analysis of Jejunal Samples

Check if the same lab product or an alternative is used in the 5 most similar protocols
The method used to prepare samples for morphometry analysis was previously described by Daneshmand et al.24 (link). Briefly, jejunal samples were stored in a 10% formaldehyde phosphate buffer for 48 h. The samples were then processed on a tissue processor (Excelsior AS, Thermo Fisher Scientific, Loughborough, UK), fixed in paraffin using an embedder (Thermo Fisher Histo Star Embedder, Loughborough, UK), and cut with a microtome (Leica HI1210, Leica Microsystems Ltd., Wetzlar, Germany) to a length of 3 cm per slice. The slices were placed on a slide and dehydrated on a hotplate (Leica ASP300S, Leica Microsystems Ltd., Wetzlar, Germany) and dyed with hematoxylin and eosin. Finally, the dyed slices of jejunal were examined under a microscope (Olympus BX41, Olympus Corporation, Tokyo, Japan). A total of 8 slides were prepared from the jejunal segment per bird, and ten individual well-oriented villi were measured per slide (80 villi/bird). The average of each measurement per sample was reported as the respective a mean for each bird. Villus width (VW) was measured at the base of each villus; villus height (VH) from the top of the villus to the villus-crypt junction, crypt depth (CD) from the base of the adjacent villus to the sub-mucosa, the ratio of VH/CD and villus surface area were calculated.
+ Open protocol
+ Expand
6

Tissue Dehydration Optimization for WHLS

Check if the same lab product or an alternative is used in the 5 most similar protocols
This procedure is a critical step in WHLS preparation. Here, a suitable dehydration procedure was established after several preliminary experiments. The sections were placed in a Leica ASP300S dehydrator (Leica Microsystems) under normal pressure. The dehydration procedure is shown in Supplement Table 1.
+ Open protocol
+ Expand
7

Histological Assessment of Lung Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
All of the rats were humanely killed at the end of the investigation. Lung tissue samples were taken during the necropsy and put in a 10% buffered formalin solution for storage. After a 2-day fixation, tissue samples were routinely processed using a fully automated tissue processor (Leica ASP300S; Leica Microsystem, Nussloch, Germany) and embedded in paraffin wax. Five micrometer sections were cut using a fully automated Leica RM 2155 rotary microtome (Leica Microsystem, Nussloch, Germany) from the paraffin blocks. The sections were stained with hematoxylin-eosin (HE), coverslipped, and examined with a light microscope.
According to the degree of hyperemia, edema, inflammatory cell infiltrations, and epithelial cell loss, the histopathological lesions were graded from 0 to 3. The scoring system is shown in Table 1. The histological scoring criteria have been modified from the study by Passmore et al. (2018) (link).
+ Open protocol
+ Expand
8

Histopathological Analysis of Fish Skin Lesions

Check if the same lab product or an alternative is used in the 5 most similar protocols
The taxonomic names and scientific classification for fish species herein were made in accordance with FishBase (Thomson, 1990; Engin and Innal 2017; Fricke et al. 2020) .
During the necropsy, samples of fish skin lesions were collected at the site of parasitic infection. For histopathological assessment, the whole body of small fish individuals was transversally cut and fixed in 10% neutral formalin solution. Parasite attachment areas were selected and skin samples were prepared by an automatic tissue processing equipment (Leica ASP300S; Leica Microsystem, Nussloch, Germany). The tissues of fish were embedded in paraffin, and 5 μm serial sections were acquired using a Leica RM 2155 rotary microtome (Leica Microsystem, Nussloch, Germany). Subsequent, histopathological sections were stained with hematoxylin and eosin (HE) and examined under 40X magnification of a light microscope. Morphometric evaluation and microphotography were performed using the Database Manual cellSens Life Science Imaging Software System (Olympus Corporation, Tokyo, Japan).
+ Open protocol
+ Expand
9

Multimodal Tissue Analysis of Gastrointestinal Cancers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Thirty human surgical samples (25 colorectal adenocarcinomas and 5 gastric adenocarcinomas) harboring a lesion of adequate dimensions (>2 cm) to allow multiple sampling in parallel were sampled according to standard practice and fixed in parallel in PBF and in GAF (working solution).
Following overnight fixation at RT, dehydration in alcohol and paraffin embedding followed standard procedures to paraffin embedding with an automatic processor (Leica ASP 300, Leica Microsystems, Wetzlar, Germany). Sections were stained in Haematoxylin and Eosin (H&E). Samples were subjected to i) immunohistochemical staining (whole cohort, 30 cases); ii) FISH analysis (five gastric carcinomas); iii) molecular analyses (eight cases of colorectal cancer).
The study was approved by the Ethic Institutional Review Board (IRB) responsible for "Biobanking and use of human tissues for experimental studies"—Department of Medical Sciences, University of Turin.
+ Open protocol
+ Expand
10

Histomorphology of Implant Area

Check if the same lab product or an alternative is used in the 5 most similar protocols
Formalin-fixed tissues of the implant area were dehydrated through a series of graded ethyl alcohol solutions (50%, 75%, 95% and 100%), cleared with xylene and embedded in paraffin using an automatic tissue processor (Leica ASP 300; Leica Microsystems, Germany). Paraffin sections of 5 µm thick were stained with Masson’s Trichrome stain. The stained sections were observed under light microscope, and digital images were captured for qualitative histomorphology and quantitative stereological analysis (BX51 microscope, DP-70 digital camera; Olympus Europe, Germany).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!