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4 protocols using anti v5 antibody r960 25

1

Ubiquitination Assay for Nrf2 Regulation

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Ubiquitination assay was performed as described elsewhere [20 (link)]. In brief, HEK293 cells (ATCC) were transfected with plasmids expressing HA-tagged Ub, V5-tagged Nrf2, and FLAG-tagged Keap1 [21 (link)] for 48 h and then treated with MGS for 16 h. Prior to lysis, cells were treated with 10 μM of MG132 (Sigma-Aldrich) for 3 h to block ubiquitin-dependent protein degradation. The total cell lysate was prepared by Pierce™ IP lysis buffer per the manufacturer’s protocols (Thermo Scientific). For precipitating V5-tagged Nrf2, 1 μg of anti-V5 antibody (R960–25, Thermo Scientific) was added to the cytosolic fraction. Immune complexes captured by protein A-sepharose (Thermo Scientific) were analyzed by immunoblotting for HA (H3663, Sigma) to reveal the ubiquitinated Nrf2.
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2

Comprehensive Western Blot Analysis

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Western blotting was performed using antibodies against STT3A (12034-1-AP), STT3B (15323-1-AP), MAGT1 (17430-1-AP), and prosaposin (10801-1-AP) from the Proteintech Group (Rosemont, IL). Antibodies against TUSC3 (SAB4503183) and actin (A5316) were purchased from Sigma-Aldrich (St. Louis, MO). The antibody against EMC3 (sc-365903) was purchased from Santa Cruz Biotechnology (Dallas, TX). The antibody against SHBG (MAB2656) was purchased from R&D Systems (Minneapolis, MN). The antibody against HA (C29F4) was acquired from Cell Signaling Technology (Danvers, MA). The anti-V5 antibody (R960-25) was purchased from Thermo Fisher Scientific. The anti-NS1 monoclonal antibody 1F11 was a gift from P. Malasit at the National Center for Genetic Engineering and Biotechnology in Thailand.
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3

Yeast Meiotic Chromosome Spread Analysis

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Surface nuclear spreads were performed as described previously (Jin et al, 2009 (link)). In brief, yeast cells enriched at prophase I (∼5 h after induction of meiosis) were spheroplasted by lyticase treatment. Spheroplasts were then fixed and poured onto a glass slide. The slide was then rinsed with PhotoFlo 200 and air-dried, followed by PBS buffer with 3% BSA to block for 2 h at room temperature. Anti-V5 antibody (R960-25; Thermo Fisher Scientific) was used to detect V5-Csm4 and Ndj1-V5; anti-HA antibody (12CA5; Roche/Sigma-Aldrich) was used to detect Mps2-3HA. Rec8-GFP was detected by an anti-GFP mouse monoclonal antibody (ab209; Abcam). Secondary antibodies (FITC-conjugated goat antirabbit, rhodamine-conjugated goat antimouse, and Cy3-conjugated goat antirat; Jackson ImmunoResearch Laboratories) were used at a dilution of 1:500. Mounting medium with DAPI was added before microscopy. Images were acquired with an epifluorescence microscope (Axio Imager M1; Zeiss) with a 100× objective lens (NA = 1.40) at room temperature.
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4

Surface Spread Nuclear Localization

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Surface nuclear spreads were performed as described previously (Jin et al., 2009) . In brief, yeast cells enriched at prophase I (~5 hours after induction of meiosis) were spheroplasted by lyticase treatment. Spheroplasts were then fixed and poured onto a glass slide. The slide was then rinsed with PhotoFlo 200 and air dried, followed by PBS buffer with 3% BSA to block for 2 hours at room temperature. Anti-V5 antibody (R960-25; Thermo Fisher Scientific) was used to detect V5-Csm4 and Ndj1-V5; anti-HA antibody (12CA5; Roche/Sigma) was used to detect Mps2-3HA. Rec8-GFP was detected by an anti-GFP mouse monoclonal antibody (ab209, Abcam). Secondary antibodies (FITC-conjugated goat anti-rabbit, rhodamine-conjugated goat anti-mouse, and Cy3-conjugated goat anti-rat; Jackson ImmunoResearch Laboratories) were used at a dilution of 1:500. Mounting medium with DAPI was added before microscopy. Images were acquired with an epifluorescence microscope (Axio Imager M1, Zeiss) with 100× objective lens (NA=1.40) at room temperature.
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