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14 protocols using ecl plus detection kit

1

Western Blot Protein Analysis

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The cells were lysed using RIPA buffer containing 50 mM Tris-HCl (pH 7.4), 150 mM NaCl, 1% Triton X-100, 0.25% sodium deoxycholate, 5 mM EDTA (pH 8.0), and 1 mM EGTA supplemented with protease and phosphatase inhibitors. After 20 min of cell lysis on ice, cell debris was removed by microcentrifugation, followed by a rapid freezing of the supernatants. The protein concentration was measured via the Bradford method. In our experiments, equivalent loads of 25–100 μg of protein were electrophoresed using an SDS-polyacrylamide gel and were then electrophoretically transferred from the gel onto a polyvinylidene fluoride (PVDF) membrane (Millipore, Bedford, MA, USA). After the blocking step with 5% nonfat milk, the membrane was then hybridized with specific primary antibodies overnight at 4 °C and was subsequently incubated in a corresponding horseradish peroxidase-conjugated secondary antibody for 1 h. The relative protein levels on membranes were visualized using an ECL-Plus Detection Kit (PerkinElmer Life Sciences, Boston, MA, USA).
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2

Western Blot Analysis of ALDH1A3, STAT1, and STAT3

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Cells were lysed at 4 °C in RIPA buffer supplemented with protease and phosphatase inhibitors. Equal loads of 30 μg of proteins were electrophoretically separated using SDS/polyacrylamide gels and then transferred to the PVDF membrane (Millipore, Bedford, MA, USA). After blocking with 5% nonfat milk, the membrane was made to react with specific antibodies (ALDH1A3, Abcam #ab129825, 1:1000; STAT3, Cell Signaling #4904, 1:1000; p-STAT3 (Try705), Cell Signaling #9145, 1:1000; STAT1, Santa Cruz #sc-417, 1:1000; p-STAT1 (Try701), Cell Signaling #9167, 1:1000; β-actin, Sigma-Aldrich #A2228, 1:1000) overnight at 4 °C and then incubated with horseradish peroxidase-conjugated secondary antibody for 1 h. Blots were visualized using an ECL-Plus detection kit (PerkinElmer Life Sciences, Boston, MA, USA).
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3

Quantifying Radiation-Induced Inflammatory and Autophagy Markers

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The mRNA levels of cyclooxygenase-2 (COX-2), interleukin-1 beta (IL-1β), interleukin-6 (IL-6) and cytosolic phospholipase A2 (cPLA2) were determined by quantitative real-time polymerase chain reaction (qPCR) in irradiated and contralateral non-irradiated mammary glands (n = 3) 6 h after the last session of irradiation as previously described [7 (link)].
Tissues were homogenized in 150 mM NaCl, 50 mM Tris pH 7.5, 1 % triton, 0.5 % sodium deoxycholate and 0.1 % sodium dodecyl sulfate. MMP-2 and MMP-9 were quantified by zymography, as previously described [6 (link)]. Autophagy markers LC3B1, LC3B2 and p62 were quantified by Western blot. Proteins were resolved in 15 % acrylamide gel and transferred to PVDF membrane, which were probed with LC3B1 + LC3B2 primary antibody (1:10 000, PA5-32254, Thermo Scientific, Rockford, IL, USA), p62 (1:1000, ab56416, Abcam, Toronto, ON, Canada) and secondary antibody (1:10 000, LS-C181152, LifeSpan BioSciences, Seattle, WA, USA). The proteins were revealed by ECL Plus detection kit (PerkinElmer, Waltham, MA, USA). Relative intensity of the bands were normalized to beta-actin internal standard using ImageJ Gel Analyze function.
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4

Western Blot Analysis of Rab Proteins

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The cells were lysed at 4 °C in RIPA buffer supplemented with protease and phosphatase inhibitors. Equal amounts (30 μg) of protein were separated electrophoretically using SDS-polyacrylamide gels and then transferred to PVDF membranes (Millipore, Bedford, MA, USA). After being blocked with 5% non-fat milk, the membrane was incubated with specific antibodies (RAB3C: GTX108610, 1:5000, GeneTex, Taipei, Taiwan; RAB27A: GTX109180, 1:5000, GeneTex, Taipei, Taiwan; RAB3B: GTX108610, 1:5000; GeneTex, Taipei, Taiwan; RAB26: GTX118872, 1:5000; GeneTex, Taipei, Taiwan; IL-6: GTX110527, 1:1000, GeneTex, Taipei, Taiwan; STAT3: #4904, 1:1000, Cell Signaling, USA; phospho-STAT3: #9145, 1:1000, Cell Signaling, USA) overnight at 4 °C and then incubated with horseradish peroxidase-conjugated secondary antibody for 1 h. The blots were visualized using an ECL-Plus detection kit (PerkinElmer Life Sciences, Boston, MA, USA).
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5

Protein Expression in Liver and Testis

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Liver and testicular tissues at 25~50 mg were lysed in RIPA buffer, and the protein concentration was determined with a Pierce™ BCA Protein Assay Kit (Thermo Fisher Scientific, Waltham, MA, USA). Anti-rat Abs for tubulin, AGER1,cluster of differentiation 36 (CD36), GLO-1, p38 mitogen-activated protein kinase (p38MAPK), and RAGE were used at a dilution of 1:1000 to detect immunoreactive signals, except for CML (1:100), tubulin (1:5000), and CTSD (1:2000). Abs were purchased from Santa Cruz Biotechnology (Santa Cruz, San Jose, CA, USA), except for GLO-1 (Abcam, Cambridge, UK), RAGE (Abcam), CML (Abcam), tubulin (GeneTex, Hsinchu City, Taiwan), and CTSD (Sigma-Aldrich, Taipei, Taiwan). Blots were visualized using an enhanced chemiluminescence (ECL)-Plus detection kit (PerkinElmer Life Sciences, Boston, MA, USA).
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6

Western Blot Analysis of Signaling Proteins

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Cells were lysed at 4°C in RIPA buffer supplemented with protease and phosphatase inhibitors. Total lysates (containing 30 µg of protein) were separated through sodium dodecyl sulfate polyacrylamide gel electrophoresis and then transferred onto PVDF membranes (Millipore, Bedford, MA, USA). After they had been blocked with 5% nonfat milk, the membranes were probed with specific antibodies [γH2AX, Millipore #05-636-I; p-IRF-3 (ser396), Invitrogen #70012; IRF-3, Cell Signaling #4302; STING, Cell Signaling #13647; NF-κB, Cell Signaling #8242; p-NF-κB (ser536), Cell Signaling #3033; Lamin A/C, Genetex #GTX101127; p-STAT1 (Try701), Cell Signaling #9167; STAT1, Santa Cruz #sc-417; PD-L1, Genetex #GTX104763, Abcam #ab269674; β-actin, Millipore #MAB1501] at 4°C overnight and then incubated with the horseradish peroxidase-conjugated secondary antibody for 1 h. All signals were visualized using the ECL-Plus detection kit (PerkinElmer Life Sciences, Boston, MA, USA).
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7

Protein Extraction and Western Blot Analysis

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Cells were lysed using RIPA buffer containing 50 mM Tris-HCl (pH 7.4), 150 mM NaCl, 1% Triton X-100, 0.25% sodium deoxycholate, 5 mM EDTA (pH 8.0), and 1 mM EGTA supplemented with protease and phosphatase inhibitors. After 20 min of lysis on ice, cell debris was removed via microcentrifugation and the supernatants were rapidly frozen. The protein concentration was measured via the Bradford method. In my experiments, equivalent samples containing 25–100 µg of protein were loaded onto an SDS-polyacrylamide gel, separated by electrophoresis, and electrophoretically transferred from the gel onto a polyvinylidene fluoride (PVDF) membrane (Millipore, Bedford, MA, USA). After blocking with 5% nonfat milk, the membrane was hybridized with specific primary antibodies overnight at 4 °C and subsequently incubated with a corresponding horseradish peroxidase-conjugated secondary antibody for 1 h. The relative levels of proteins on the membranes were determined using an ECL-Plus Detection Kit (PerkinElmer Life Sciences, Boston, MA, USA).
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8

Protein Extraction and Western Blot Analysis

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The cells were lysed at 4 °C in RIPA buffer containing 50 mM Tris-HCl (pH 7.4), 150 mM NaCl, 1% Triton X-100, 0.25% sodium deoxycholate, 5 mM EDTA (pH 8.0), and 1 mM EGTA supplemented with protease and phosphatase inhibitors. After 20 min of lysis on ice, the cell debris was removed via microcentrifugation, followed by rapid freezing of the supernatants. The protein concentration was determined using the Bradford method. In our experiments, equivalent loads of 25–50 μg of protein were electrophoresed using a SDS-polyacrylamide gel and then electrophoretically transferred from the gel to a PVDF membrane (Millipore, Bedford, MA, USA). After blocking with 5% non-fat milk, the membrane was incubated in specific primary antibodies (Ghrelin: GTX10473, GeneTex, Irvine city, CA, USA, 1:1000; Aurora A: #4718, Cell Signaling, Danvers, MA, USA, 1:1000; MMP10: sc-80197, Santa Cruz, Dallas, TX, USA, 1:1000; β-actin: A5316, Sigma-Aldrich, Louis, MO, USA, 1:5000; GHS-R 1: sc-374515, Santa Cruz, 1:2000) overnight at 4 °C and subsequently incubated in a corresponding horseradish peroxidase-conjugated secondary antibody for 1 h. The membranes were visualized using the ECL-Plus detection kit (PerkinElmer Life Sciences, Boston, MA, USA).
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9

Western Blot Protein Analysis Protocol

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Cells were lysed at 4 °C in RIPA buffer supplemented with protease and phosphatase inhibitors. Equal amounts of proteins were separated by using sodium dodecyl sulfate polyacrylamide gels, and then transferred to a PVDF membrane (Millipore, Bedford, MA, USA). After blocking with 5% non-fat milk, the membrane was incubated with specific antibodies overnight at 4 °C and then incubated with horseradish peroxidase (HRP) conjugated secondary antibody for 1 h. The blots were visualized by using an ECL-Plus detection kit (PerkinElmer Life Sciences, Boston, MA, USA) [31 (link)].
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10

Protein Expression Analysis in Stem Cells

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The cells were lysed at 4 °C in RIPA buffer supplemented with protease and phosphatase inhibitors. Equal amounts of protein (30 μg) were electrophoretically separated using SDS-polyacrylamide gels and were then transferred to PVDF membranes (Millipore, Bedford, MA, USA). After blocking with 5% nonfat milk, the membranes were incubated overnight at 4 °C with the following specific antibodies: ALDOA: Cat. T0891, 1:1000 (Abcam (Epitomics), Cambridge, UK); ALDH1A3: Cat. GTX10784, 1:5000 (GeneTex, Taipei, Taiwan); Oct4: Cat. ab19857, 1:1000 (Abcam, Cambridge, UK); Nanog: Cat. 4903, 1:1000 (Cell Signaling, MA, USA); CD44: Cat. 3570, 1:1000 (Cell Signaling, MA, USA); BTK: Cat. sc-81159, 1:1000 (Santa Cruz, TX, USA); and Nestin: Cat. 66259-1, 1:1000 (Proteintech, IL, USA). Subsequently, the membranes were incubated with a horseradish peroxidase conjugated secondary antibody for 1 h. The blots were visualized using an ECL-Plus detection kit (PerkinElmer Life Sciences, Boston, MA, USA).
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