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Ly6c pe

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Ly6C-PE is a fluorescent-labeled antibody used for the detection and analysis of Ly6C positive cells in flow cytometry applications. Ly6C is a cell surface marker expressed on various immune cell types, including monocytes and granulocytes. The PE (Phycoerythrin) fluorescent label allows for the identification and quantification of Ly6C positive cells within a sample.

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13 protocols using ly6c pe

1

Monocyte STAT5 Phosphorylation Assay

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Monocytes were enriched from the bone marrow of WT and DKI mice as described above. Monocytes were seeded at a density of 1 x 105 cells/well in a 96-well plate in complete medium and were rested at 37°C for 30 min. The monocytes were stained with CD11b-FITC (N418), Ly6C-PE (HK1.4), and LIVE/DEAD Fixable Near-IR Dead Cell Stain Kit (ThermoFisher L34976) for 20 min at 37°C. Following surface staining, the monocytes were stimulated with 100 ng/mL GM-CSF (Peprotech 315-03) for 15 min at 37°C. The stimulated monocytes were then fixed in 2% paraformaldehyde in PBS at 37°C for 10 min. Following fixation, the monocytes were permeabilized with 90% ice cold methanol in PBS and were incubated at -20°C for 30 min. Monocytes were washed with staining buffer, then stained with pSTAT5-PE (BD Biosciences 47/Stat5 (pY694)) at room temperature for 30 min. The monocytes were washed and resuspended in staining buffer. Cells were analyzed on a BD LSRFortessa.
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2

Multicolor Immune Cell Profiling

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For Lymphatic endothelial cell and monocyte/macrophage staining, cells were stained for PE anti-mouse/human CD11b (Biolegend, #101208), Pacific Blue™ anti-mouse CD45 (Biolegend, #103126), APC anti-mouse F4/80 (Biolegend, #123116), Lyve-1 (Abcam, #ab14917), Ly6C-PE (Thermo Fisher, #12593282), Alexa Fluor™ 488 goat anti-rabbit IgG (Thermo Fisher Scientific, #A11034). Data were recorded with an LSR II flow cytometer (BD Biosciences) and analyzed with FlowJo (Version 9.0).
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3

Isolation and identification of myeloid cells

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Myeloid cells were extracted from whole hemispheres, isolated into single-cell suspensions and identified using fluorescence-activated cell sorting (FACS) gating for CD11b+CD45int as previously described (Elmore et al., 2014 (link)). Cells were stained with the following surface antibodies purchased from Biolegend (San Deigo, CA) at 1:200 unless otherwise indicated: CD34-eFlour660 (1:50, 50-0341-80, eBioscience, San Diego, CA), Sca-1-AF700 (1:100, 108141), CD16/32-PE (101307), Ter119-PE/Cy5 (116209), ckit/CD117-PE/Cy7 (25-1171-81, eBioscience), CD150/SLAM-PerCP-eFlour710 (46-1502-82, eBioscience), CD11b-APC (101212), CD11b-PE (101208), Gr1-AF700 (108422), CD45-AF700 (103128), CD45-APC/Cy7 (103116), NK1.1-PE (108707), CD3-PE/Cy7 (100220), CD19-Per-Cyanine5.5 (45-0193-82, eBioscience), CD11c-APC/Cy7 (117323), Ly6C-PE (1:400, 128007), Ly6G-5.5 (127615). For HSCs, CMPs, and GMPs, all cells were gated on live (PI-), Ter119- cells and then identified with the following gating strategy: HSCs: FcyR-, ckit+ Sca+ CD34-, SLAM+, CMPs: FcyR-, ckit+, Sca-, CD35+, and GMPs: FcyR+, ckit+, Sca-, CD34+. Samples were acquired with the BD LSRII or BD Fortessa X20, and sorted with the BD FACS Aria II.
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4

Immune Cell Phenotyping from Tissues

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The cell suspensions obtained from bone marrow, liver, kidney, and spleen were centrifuged at 500 × g for 5 min. The pellet was resuspended in erythrocyte lysis buffer and placed in an ice-cold box for 10 min. After centrifugation, the pellet was resuspended with PBS. For human samples, the following antibodies were used: CD11b-APC (RanTai Co. Ltd, Shanghai, China), HLA-DR-PE (MCE, USA), CD15-FITC (Thermo Fisher Scientific, USA), CD14-PE (Thermo Fisher Scientific, USA) for 30 min on ice in the dark. For murine samples, CD11b-FITC, Ly6C-PE, Ly6G-APC antibodies (eBioscience, USA) were incubated as described above. After washing twice with 3 ml PBS, the immunocytes were analyzed on a flow cytometer (BD Biosciences, USA).
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5

Flow Cytometric Analysis of Immune Cells

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Flow cytometry was performed on single cell suspensions of splenic, iliac lymph node, bladder and prostate tissues. Tissues were made into single cell suspensions by passing through 40 μm mesh filter membranes to remove debris and washing with 2% FCS (HyClone) in PBS (Gibco). Samples were then fixed and permeabilized using fixation-permeabilization buffers (eBioscience Cat. Numbers 8222-49 and 8333-56), according to manufacturer’s instructions. Following this cells were stained with the following mouse antibodies (Ly6G-FITC, Ly6C-PE, IL4-PE, B220-PE, CD3-PerCp, CD86-PerCp, CD11b-APC, IL17A-APC (eBioscience), CD8-FITC, IFNγ-FITC, CD4-PerCp, CD4-APC (Biolegend)), and run on an Accuri benchtop C6 cytometer. Results were analyzed using FlowJo software and statistics generated using Prism software from GraphPad.
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6

Isolation and Characterization of Muscle-Resident Immune and Stromal Cells

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The fascia of TA muscles was removed; then muscles were dissociated and digested in RPMI medium containing 0.2% (w/v) collagenase B (11088815001; Roche Diagnostics GmbH, Mannheim, Germany) at 37 °C for 1 h and passed through a 70 μm and then a 30 μm cell strainer (Miltenyi Biotec, Bergisch Gladbach, Germany). CD45+ cells were isolated using magnetic beads (130‐052‐301, Miltenyi Biotec) and incubated with FcR blocking reagent (130‐059‐901, Miltenyi Biotec) for 20 min at 4 °C in PBS with 2% FBS. CD45+ cells were then incubated with Ly6C‐PE (12‐5932; eBioscience, San Diego, CA, USA) and CD64‐APC (558539, BD Biosciences) antibodies for 30 min at 4 °C. CD45 cells were incubated with CD31‐FITC (1:1000, 11‐0311‐82; Invitrogen, Waltham, MA, USA), CD45‐FITC (1:1000, 11‐0451‐82, Invitrogen), ITAG7(a7)‐APC (1:1000, MA5‐23555, Invitrogen), and Sca1‐PeCy7 (1:5000, 25‐5981‐82, Invitrogen) antibodies for 30 min at 4 °C. MPs (CD64+ cells) and FAPs (CD31/CD45/a7/Sca1+ cells) were analyzed and sorted using a FACS Aria III Cell Sorter (BD Biosciences) with a purity of 96.9% and 97.5%, respectively. In some experiments, Ly6C+ and Ly6C MPs, or CD64+ MPs and FAPs were cytospinned on StarFrost (Knittel, Braunschweig, Germany) slides and immunostained.
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7

Immune Signaling Pathway Analysis

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Lipopolysaccharide (LPS, Escherichia coli 0111:B4), lipoteichoic acid (LTA), and polyinosinic:polycytidylic acid (Poly I:C) were from Sigma-Aldrich, and phosphorothioate-modified CpG ODN was synthesized by Sybersyn. Phospho-p44/42 MAPK (Erk1/2) (Thr202/Tyr204) (197G2) rabbit mAb, Phospho-SAPK/JNK (Thr183/Tyr185) (81e11) rabbit mAb, Phospho-p38 MAPK (Thr180/Tyr182) (D3F9) rabbit mAb, Phospho-NF-κB p65 (Ser536) (93H1) rabbit mAb, EEA1 (C45B10) rabbit mAb, Rab5 (C8B1) rabbit mAb, and Rab7 (D95F2) rabbit mAb were from Cell Signaling Technology. CD107a/LAMP-1 mouse mAb was from BioLegend; β-actin mouse mAb and Ccz1 antibodies (L-20) were obtained from Santa Cruz Biotechnology; SNX10 antibody (HPA015605) was acquired from Sigma-Aldrich. Mouse CD4-FITC, CD8-PE, B220-APC, CD11b-PE, CD11b-APC, Gr1-FITC, Ly6C-PE, and F4/80-APC antibodies were purchased from eBioscience. Fluorescein isothiocyanate isomer I (FITC) and Cell Counting Kit-8 (CCK-8) were from Sigma-Aldrich; Alexa Fluor® 488 dye and Alexa Fluor® 647 dyes were from Thermo Fisher Scientific.
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8

Isolation and Characterization of Muscle-Derived MPs

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Fascia of the TA muscles was removed. Muscles were dissociated and digested in RPMI medium containing 0.2% of collagenase B (Roche Diagnostics GmbH 11088815001) at 37 °C for 1 h and passed through a 70 μm and a 30 μm cell strainer. CD45+ cells were isolated using magnetic beads (Miltenyi Biotec 130-052-301) and incubated with FcR blocking reagent (Miltenyi Biotec 130-059-901) for 20 min at 4 °C in PBS 2% FBS. Cells were then stained with Ly6C-PE (eBioscience 12-5932) and CD64-APC (BD Pharmingen 558539) antibodies for 30 min at 4 °C. MPs were analyzed or sorted using a FACS Aria III cell sorter (BD Biosciences) (gating strategy is shown Figure S1). In some experiments, Ly6C+ and Ly6C MPs were cytospined on starfrost (Knitterglaser, Bielefeld, Germany) slides and immunostained.
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9

Phenotypic Analysis of MDSCs

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MDSCs isolated from the neonatal spleens as described were labeled for a phenotypic analysis by flow cytometry with 0.5 µg of antibody per 2 × 105 cells. Gr1 PE, Ly6C PE and Ly6G FITC were obtained from EBioscience (San Diego, CA, USA). CDllb APC-Vio770, TLR2 PE and TLR4 APC were obtained from Miltenyi Biotec (Bergisch Gladbach, Germany). The TLR5 antibody (Proteintech, Rosemont, IL, USA) was used to stain the total splenocytes prior to MDSC isolation for 1 h on ice in the dark and washed twice (300× g, 10 min, 4 °C). The primary antibody was revealed with goat anti-mouse IgG (H+L) cross-adsorbed with the secondary antibody, Alexa Fluor 568 (Thermofisher, Waltham, MA, USA), for 45 min on ice in the dark, washed and then subsequently stained for the MDSC isolation. After staining and separation, the cells were subsequently placed in PBS that contained 0.4% paraformaldehyde. The data were acquired using a BD-LSRFortessa (Becton Dickinson, Franklin Lakes, NJ, USA) and FACS Diva version 8.0 software. A minimum of 10,000 events were collected per sample. The data files were analyzed using FCS Express Software (version 6) (De Novo Software, Los Angeles, CA, USA).
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10

Multicolor Flow Cytometry for Innate Immune Cells

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For differential quantification of innate immune cells, isolated leukocytes for both lung and spleen tissue were stained with antibodies against Ly6G PerCP-Cyanine5.5 (eBioscience, California, USA), CD11b-APC, CD11c-FITC, Ly6C-PE, CD11c-PE, MHC-II-FITC, CD40-FITC, CD80-FITC, CD86-FITC CD4-FITC and CD8-APC (all from eBioscience). For leukocytes analysis, single-cell suspensions from lungs were stimulated with 10 μg/ml of EAST-6 in the absence or presence of 4 μg/ml brefeldin A (Sigma, St. Louis, USA) for 6 h at 37 °C [26 ]. CD206-PE (eBioscience) antibody was used for the detection of intracellular markers of lymphocyte subsets.
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