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5 protocols using rabbit anti stim1

1

Antibody and Chemical Reagents for PRRSV Study

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Primary antibodies were mouse anti-PRRSV N protein (produced in our laboratory), mouse anti-β-actin (Proteintech, #A5316), mouse anti-Flag (Proteintech, #80010-1-RR), rabbit anti-LC3 (Proteintech, #14600-1-AP), rabbit anti-ATG7 (Cell Signaling Technology, #2631), rabbit anti-CaMKII (Abcam, #ab168818), rabbit anti-p-AMPK (Thr172) (Cell Signaling Technology, #2535), rabbit anti-AMPK (Cell Signaling Technology, #2532), rabbit anti-p-mTOR(Ser2448) (Cell Signaling Technology, #5536), rabbit anti-mTOR (Cell Signaling Technology, #2983), rabbit anti-STIM1 (Cell Signaling Technology, #4916), mouse anti-Orai1 (Proteintech, #66223–1), rabbit anti-GRP78 (Proteintech, #11587-1-AP) and rabbit anti-Calnexin (Abcam, #ab92573). HRP-labeled rabbit or mouse secondary antibodies were purchased from Beyotime (China).
Chemicals used included 2-Aminoethyl diphenylborinate (2-APB) (Selleck, #S6657), 3-MA (Selleck, #S2767), 4-Phenylbutyric acid (4-PBA) (Selleck, #S3592), BAPTA-AM (Selleck, #S7534), Dantrolene sodium (Selleck, #S5478), Dorsomorphin (Compound C) 2HCL (Selleck, #S7306), KN-93 (Selleck, #S7423), ML-9 HCL (Selleck, #S6847), Procaine (Selleck, #S4668), Rapamycin (MedChemExpress, #HY-10219), Tetracaine-HCL (Selleck, #S2573), Thapsigargin (Selleck, #S7895), Tunicamycin (Beyotime, #SC0393).
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2

Antibody Immunoprecipitation and Immunoblotting Protocol

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The following antibodies were used in for protein immunoprecipitation or immunoblotting: mouse anti-Flag M2 (Sigma), rabbit anti-Flag (Sigma), anti-GAPDH (Calbiochem), rabbit anti-Stim1 (Cell Signaling), anti-Bip/GRP78 (Abcam), anti-PARP (cleaved) (Cell Signaling), anti-Calsequestrin 2 (Thermo), anti-Fam20C (Tagliabracci et al., 2014 (link)), and anti-His (Invitrogen).
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3

Antibody Validation for Western Blot and IF

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The following antibodies were used for western blotting (WB) and immunofluorescence (IF): mouse anti-beta-actin (Santa Cruz, catalog number sc-47778; WB 1:2000), mouse anti-HA (ENZO, catalog number ENZ-ABS120-0200; WB 1:1000), mouse anti-transferrin receptor (Invitrogen, catalog number 13–6800; WB 1:1000), rabbit anti-Stim1 (Cell Signaling Technology, catalog number 5668S (D88E10); WB 1:2000), rabbit anti-Orai1 (Sigma Aldrich, catalog number O8264; WB 1:2500), goat anti-myc tag (Abcam, catalog number ab9132; IF 1:2000), rabbit anti-RHBDL2 (Proteintech, catalog number 12467-1-AP; WB 1:250 – only detected RHBDL2 in HaCaT lysates), rabbit anti-V5 tag (Cell Signaling Technology, catalog number 13202S; WB and IF 1:2000). Corresponding species-specific HRP or fluorescently coupled secondary antibodies were used from Santa Cruz and Cell Signaling (WB) or Invitrogen (IF).
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4

Immunostaining of Brain Tissues and Cells

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Brain tissues were fixed in 4 % paraformaldehyde for 24 h at room temperature (RT) and dehydrated in phosphate-buffered saline (PBS) containing 30 % sucrose for 48 h at 4 °C and then coronally sectioned into 30 μm thick slices with a cryostat. Cells were fixed in 4 % paraformaldehyde for 30 min at RT. 30 μm-thick frozen coronal sections or cultured cells were first permeabilized in 0.3 % Triton X-100 for 20 min, incubated with 10 % goat serum for 1 h at RT. The sections or cells were then incubated at 4 °C overnight with the primary antibodies, including mouse anti-shank3 (Neuromab, Cat# 75344, 1:200), rabbit anti-STIM1 (1:100, Cell Signaling Technology, Cat# 5668), rabbit anti-NeuN (1:100, Abcam, Cat# ab177487). After rinsing three times with PBS, sections or cells were incubated with secondary antibodies for 2 h at RT in the dark. Slices were covered with a mounting medium containing DAPI to counterstain nuclei and imaged using a laser scan confocal microscope (FV1000, Olympus, Japan) with the same exposure settings for each group.
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5

Western Blot Analysis of Protein Expression

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Cells were lysed in a protein extraction solution (Intron, Seongnam, South Korea). After centrifugation, the samples were boiled at 95 °C for 10 min, and 50 µg protein of each lysate was subjected to electrophoresis on 10% sodium dodecyl sulfate polyacrylamide gels. All samples were electroblotted on polyvinylidene fluoride membranes (Merck Millipore, Burlington, MA, USA) and, after blocking, the blots were incubated with appropriate rabbit anti-THBS4 (Santa Cruz Biotechnology, sc-390734), rabbit anti-PDGFRβ (Abcam, Cambridge, MA, USA, ab32570), mouse anti-phosphorylated PDGFRβ (Santa Cruz Biotechnology, sc-365464), rabbit anti-PDGF-D (Abcam, Cambridge, MA, USA, ab234666), mouse anti-IP3R (Santa Cruz Biotechnology, sc-271197), and rabbit anti-STIM1 (Cell Signaling Technology, Danvers, MA, USA, 5668S) antibodies in TBS-T (TBS-0.05% Tween 20) for 90 min, which was followed by washing three times with TBS-T for 15 min each, and incubation with horseradish peroxidase-conjugated anti-mouse or rabbit immunoglobulin G antibodies for 1 h. After further washing, the blots were incubated for 3 min with Western blotting HRP-substrate (Merck Millipore), and chemiluminescence was detected after exposure of the filters to ECL-Western blot films for 10 s to 10 min. Original Western blots are shown on Figures S7–S14.
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