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2 protocols using irdye 680 labeled goat anti rabbit igg

1

Quantitative Immunoblotting of Signaling Proteins

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Antibodies used were anti-phospho-Stat3 (Tyr705) (Cell signaling Technology, Cat # 9145), anti-E-cadherin (Cell signaling Technology, Cat # 3195), anti-Occludin (BD Transduction Laboratories, Cat # 611091), anti-Vimentin (Millipore, Cat #CS207806), anti-β-Actin (Sigma, Cat #A1978), anti-GAPDH (Santacruz Biotechnology, Cat # Sc-365062), anti-phospho-p44/42 MAPK (Erk1/2) (Thr202/Tyr204) (Cell signaling Technology, Cat #4370), anti-Axl (C89E7) (Cell signaling Technology, Cat #8661). Briefly, cells were rinsed in phosphate buffered saline (PBS) and lysed in lysis buffer (20 mM Tris-HCl, 150 mM NaCl, 1% Triton X-100 (v/v), 2 mM EDTA, pH 7.8 supplemented with 1 mM sodium orthovanadate, 1 mM phenylmethylsulfonyl fluoride (PMSF), 10 μg/ml aprotinin, and 10 μg/ml leupeptin). Protein concentrations were determined using the BCA protein assay (Pierce, Rockford, IL) and immunoblotting experiments were performed using standard procedures. For quantitative immunoblots, primary antibodies were detected with IRDye 680-labeled goat-anti-rabbit IgG or IRDye 800-labeled goat-anti-mouse IgG (LI-COR Biosciences, Lincoln, NE) at 1:5000 dilution. Bands were visualized and quantified using an Odyssey Infrared Imaging System (LI-COR Biosciences).
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2

Immunoblotting of Prostate Cancer Cells

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Prostate cancer cells were rinsed twice with PBS and lysed in SDS lysis buffer (described above). Protein lysates were filter cleared, and protein concentrations were determined using BCA assay kit and subjected to immunoblotting using standard procedures. For quantitative immunoblots, primary antibodies were detected using IRDye 680-labeled goat anti-rabbit IgG or IRDye 780-labeled goat anti-mouse IgG (LiCOR) at 1:1000 dilution. Bands were visualized and quantified using an Odyssey CLX Scanner (LiCOR).
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