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Polyacrylamide gels

Manufactured by Solarbio
Sourced in China

Polyacrylamide gels are a type of laboratory equipment used for the separation and analysis of biomolecules, such as proteins and nucleic acids, based on their size and charge. They are composed of a cross-linked polymer matrix that serves as a sieving medium for the separation process.

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3 protocols using polyacrylamide gels

1

Characterization of Oleosin-hEGF Fusion Protein in Safflower Seeds

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The oil body was diluted with PBS to 5 μg/µL, added 1 × loading buffer and the suspension was heated at 90 °C for 10 min. The oil body suspension was analyzed by 15% polyacrylamide gels (Beijing solarbio science & technology Co., Ltd., China). One of the gels was dyed by Coomassie Brilliant Blue (CBB) (BeiJing DingGuo ChangSheng Biotechnology Co., Ltd., China) staining method and decolored for 24 h with decolorization solution. Another gel was used to transfer protein to a PVDF membrane (BeiJing DingGuo ChangSheng Biotechnology Co., Ltd., China). It was blocked overnight with 20 mL of TBST buffer (pH = 8.0) (Beijing solarbio science & technology Co., Ltd., China) including 0.05% Tween-20 (MYM Biological Technology Co., Ltd., China) and 5% nonfat dry milk (BD Difco, USA). The blocked PVDF membrane was washed 4 times (8 min each time) with TBST buffer and incubated with a rabbit anti-hEGF polyclonal antibody (1:2000, Abcam, ab9605, Lot: GR11004-41 USA) followed by the secondary antibody which is goat anti-rabbit IgG/AP antibody (alkaline phosphatase-conjugated, Promega, S3738, Lot: 00001473 46, USA) [17 (link)]. The oleosin-hEGF-hEGF protein accumulation data in safflower seeds was analyzed with Quantity One software.
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2

Polyacrylamide Cell Culture Substrates

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polyacrylamide gels of different stiffness levels were used for cell culture, as reported previously [39 (link)]. Briefly, coverslips were coated with a thin layer of gel containing a mixture of 3-10% acrylamide and 0.01%-0.3% bis-acrylamide, resulting in gels with stiffness levels of 2, 8 and 16 kPa. Polyacrylamide gel polymerization was promoted by the addition of 10% ammonium persulfate (1/100 volume) and tetramethylethylenediamine (3/1000 volume). The coverslips were washed twice for 20 minutes each in PBS on a rocker, and then were sterilized in a PBS solution for one hour with ultraviolet light. Subsequently, 50 μL of heterobifunctional sulfosuccinimidyl 6-(4′-azido-2′-nitrophe-nylamino) hexanoate was added and photoactivated for five minutes with ultraviolet light. After being rinsed with a PBS solution, the coverslips were coated with 10 μL/mL fibronectin for 1.5 hours and rinsed before cell seeding. The gels were soaked in serum-free culture medium for 24 hours before usage. All elements of the polyacrylamide gels were purchased from Solarbio (China).
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3

Visualizing Protein Degradation Profiles

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The extraction of sarcoplasmic and myofibrillar proteins from fermented meat was based on the method of Yu et al. (2020) (link), and SDS-PAGE was used to visualize the degradation profiles of these two proteins, which were separated using 12 % and 15 % polyacrylamide gels (Beijing Solarbio Science & Technology Co., Ltd., Beijing, China), respectively. Two volumes of sample at a concentration of 2 mg/mL were mixed with 1 vol of 3 × loading buffer in a boiling water bath for 5 min. Then, 15 μL of sample and 8 μL of standard protein marker (Sangon Biotech (Shanghai) Co., Ltd., Shanghai, China) were added to the gels and electrophoresed at 120 V, 80 mA for 3 h. After electrophoresis, the gels were stained in a 0.1 % (w/v) solution of Coomassie Brilliant Blue R-250 in 50 % methanol and 10 % acetic acid for 0.5 h and then decolorized until a clear background resulted.
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