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4 protocols using atf6α

1

Western Blot Analysis of Cellular Proteins

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Western blot analysis was performed as previously described.21 Primary antibodies for ATF6α (Abcam), β‐actin (Abcam), GPX4 (Abcam), PLA2G4A (Santa Cruz Biotechnology), and secondary antibody (Abcam) were applied according to the manufacturer's instructions.
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2

Western Blotting of UPR Proteins

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To analyze the levels of UPR‐associated proteins, Western blotting was conducted, as previously described.17 Briefly, frozen aortae and lungs were crushed to a fine powder in liquid nitrogen using a mortar and pestle, and then dissolved in radioimmunoprecipitation assay buffer containing protease and phosphatase inhibitors (Millipore Sigma) at 4°C. The cleared lysates were then suspended in SDS–PAGE sample buffer, separated by 4% to 12% NuPAGE, and blotted onto PVDF membranes. The membranes were then probed with primary antibodies against p‐PERK (Abclonal, #AP0886), p‐IRE1α (Thermo Fisher Scientific, #PA1‐16927), IRE1α (Cell Signaling Technology, #3294), ATF6α (Abcam, ab122897), p‐eIF2α (Cell Signaling Technology, #9721), p‐JNK (Cell Signaling Technology, #9255), CHOP (Cell Signaling Technology, #2895S), BiP (Cell Signaling Technology, #3183S), and cleaved caspase‐3 (Cell Signaling Technology, 9664), followed by incubation with the appropriate horseradish peroxidase–conjugated secondary antibodies (1: 5000 dilution). Membranes were developed with a chemiluminescent substrate and imaged using the KwikQuant Imager system (Kindle Biosciences, LLC). Target protein band densities were quantified and normalized to those of GAPDH, beta‐actin, or beta‐tubulin, as indicated. Band intensity data are expressed relative to the control group (Young/ND).
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3

Immunoblotting Analysis of Cellular Proteins

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Total cellular lysates were prepared and analyzed by SDS-polyacrylamide gel electrophoresis, followed by immunoblotting using a standard protocol16 (link). The primary antibodies used in this study include: p97 (a generous gift from Dr. Hartmann Peterson, University of Copenhagen), ubiquitin (Santa Cruz, sc-8017), OCT4 (Proteintech, 11263-1-AP), SOX2 (Proteintech, 11064-1-AP), PERK (Cell Signaling Technology, 5683), phospho-PERK (Santa Cruz, sc-32577), ATF6α (Abcam, ab122897), BIP (Santa Cruz, sc-1051), XBP1 (BioLegend, 619502), ATF4 (Cell Signaling Technology, 11815), HIF-1α (Proteintech, 20960-1-AP), C/EBPδ (Santa Cruz, sc-636), c-MYC (Cell Signaling Technology, 5605), SKP2 (Proteintech, 11064-1-AP), β-actin (Molecular Biological Laboratories, PM053), and GAPDH (Cell Signaling Technology, 5174).
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4

Western Blot Protein Expression Analysis

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Western blot analysis was used to detect protein expression and was performed as described previously 15 (link). Antibody used in this study were as follows: p53 (1:2000, cat. sc-126, Santa Cruz, CA, US); p73 (1:1000, cat. 1636-1, Epitomics, US); GRP78 (1:1000, cat. 3183, Cell Signaling Technology (CST), Shanghai, China); PERK (1:1000, cat. 5683, CST); p-PERK (1:1000, cat. 340846, ZEN-BIOSCIENCE, China); ATF6α (1:1000, ab122897, Abcam, Shanghai, China), IRE1α (1:1000, cat. 3294, CST); ATF4 (1:1000, cat. 11815, CST); GAPDH (1:3000, cat. 301341, ZEN-BIOSCIENCE, China); Bim (1:1000, cat. 2933, CST); Caspase 3 (1:1000, cat. 9665, CST).
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