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44 protocols using syringe filter

1

Pigment Extraction and HPLC Analysis

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Pigments were extracted from cells using an acetone/methanol (7/2, v/v) mixture. The sample was vortexed vigorously for 1 min and centrifuged at 14,000× g at 4 °C for 5 min. The supernatant was filtered using a syringe filter (0.45 μm pore size, Whatman, Maidstone, UK), and the filtrate was subjected to HPLC analysis. The HPLC system was composed of an LC-6AD dual pump (Shimadzu, Japan) equipped with a Zorbax ODS column (Agilent Technologies, Santa Clara, CA, USA; particle size, 5 μm; diameter × length, 4.6 × 250 mm), a fluorescence detector, and a UV-Vis absorbance detector.
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2

Cerebral Cortex Norepinephrine Quantification

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Concentration of norepinephrine (NE) was measured in the cerebral cortex. Tissue wet weight was determined, and the tissue was homogenized in 0.1 M perchloric acid. After homogenization, the samples were centrifuged (7000× g for 15 min at 4 °C) and the supernatants were filtered through a syringe filter (0.2 micron pore size; Whatman, Marlborough, MA, USA) before HPLC analysis on Shimadzu LC-20 Prominence Chromatographic System. HPLC analysis was performed on a C18 reversed-phase column BDS Hypersil (250 × 4.6 mm, particle sz. 5 µm) under isocratic conditions, with electrochemical detection. The mobile phase consisted of a 75 mM phosphate buffer containing 2 mM citrate acid, 0.1 mM octanesulfonic acid, and 15% (v/v) acetonitrile (pH 4.6). Electrochemical detection (DECADE II, Antc Scientific, Zoeterwoude, The Netherlands) was achieved by setting a glassy carbon working electrode at +780 mV. The final concentration of NE was expressed as ng/µg wet tissue, using an external calibration curve.
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3

Fullerene Flower Synthesis and Characterization

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C60 (99.95%, MTR Ltd, Cleveland, Ohio, US) and C70 fullerene powder (99.0%, MTR Ltd., Cleveland, Ohio, US) were used as received. Each fullerene was dissolved in mesitylene (98%, Alfa Aesar, Heysham, Lancashire, UK) at room temperature under ultrasonication for 2 h; then, the solutions were filtered (syringe filter, pore: 0.02 μm, Whatman, Maidstone, Kent, UK) to remove invisible residue and undissolved fullerenes. The concentrations of the solutions were measured using UV-Vis absorption spectra and were then diluted with mesitylene to concentrations of 0.1–0.2 mM. C60-mesitylene and C70-mesitylene solutions with the same molarity were mixed at volume ratios of 1:1 and were then mixed with ethanol (99.9%, Fisher Scientific, Pittsburgh, Pennsylvania, US) in a 1:30 ratio (fullerene solution:ethanol v/v) under ultrasonication for 20 s. The mixed solutions were kept at room temperature for 24 h, and precipitated fullerene flowers were pipetted into appropriate substrates for further characterization.
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4

Photocatalytic Degradation of Pollutants

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A Pyrex batch reactor of beaker with volume of 250 mL, was used for performing the reactivity experiments. Illumination is provided by solar simulator UVACUBE 400, Honle, Germany. The photocatalytic activity of prepared photocatalyst is tested by reactions of photo-degradation of 4-nitrophenol. 100 ml of 20 ppm of pollutant (PNP, Cr6+ ions) was added to photoreactor. The photocatalyst of 50 mg was suspended in 100 ml of aqueous solution of pollutant and then stirred for 30 min to make the photocatalyst homogeneously dispersed into the solution of reaction. Then, the solar simulator was turned on, sample were taken at time interval. The concentration of 4-nitrophenol and Cr6+ ions are analyzed by a JASCO- V-730, UV–Visible recording spectrophotometer at λmax = 318 and 350 nm, respectively. Before determination, the withdrawn suspensions are filtered with syringe filter (Whatman, 0.45 µm). The pathway of photocatalytic mechanism is investigated in presence of ethanol, ascorbic acid (AA), and ethylene diamine tetra acetate (EDTA) with concentration (2 mM) for each one as OH radical, O2−• radical and holes scavengers, respectively.
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5

SARS-CoV-2 and Coronavirus RNA Extraction

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Quartz capillary with inner and outer diameter of 0.5 and 1 mm was purchased from Sutter Instrument. Pipette holder (QSW-T10N) and 0.2 mm Ag wire was purchased from Warner Instruments. Micro-injector with 34 gauge was purchased from World Precision Instruments. KCl and Tris-EDTA-buffer solution (pH 8.0) were purchased from Sigma-Aldrich. All solutions were filtered with a 0.2 μm syringe filter (Whatman). Mineral oil was purchased from Sigma-Aldrich. Heat-inactivated SARS-CoV-2 (ATCC® VR-1986HK™) RNA was purchased from ATCC. Synthetic human coronavirus 229E RNA (103011), NL63 RNA (103012) and 229E RNA (103013) were purchased from Twist Bioscience. QIAamp Viral RNA Kit was purchased from Qiagen. ThermoFisher MagMAX Viral/Pathogen Nucleic Acid Isolation Kit was purchased from ThermoFisher.
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6

Phenolic Compounds Analysis in Ginseng Seed Oil

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The phenolic compounds in ginseng seed oil were analyzed with high-performance liquid chromatography (PU-980; Jasco, Tokyo, Japan) under the following analytical conditions: a Waters C-18 column (5.0 μm, 4.6 mm × 250 mm; Waters, Milford, MA, USA) was used, with a mobile phase of water with 2% acetic acid (solvent A) and 50% acetonitrile with 0.5% acetic acid (solvent B) or (solvent A) with 2% acetic acid and 50% acetonitrile (solvent B) with 0.5% acetic acid; samples were developed from an initial 100% of A solvent to a 45% gradient after 70 min with a speed of 0.8 mL/min for 80 min. The sample was detected at 280 nm with a UV detector (MD-2010; Jasco) using a 20-μL sample for injection. Each 2 g sample was dissolved in 10 mL n-hexane, and 20 mL of 80% methanol was added to extract the phenolic compounds. Finally, 10 mL of n-hexane was added to the extract to eliminate the remaining lipid constituents, and the solvent in the 80% methanol layer was evaporated completely using a vacuum evaporator. The concentrated extracts were diluted with methanol to 10 mg/mL, and filtered through a 0.45-μm syringe filter (Whatman) for further analysis.
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7

HPLC Analysis of Fermentation Inhibitors

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Pretreatment-derived supernatants were re-centrifuged at 2465g and 200 μl of the supernatant was filtered using a syringe filter (0.2 µm, Whatman International Ltd, Maidstone, UK), and injected into vials. The concentrations of the fermentation inhibitors 2-furfuraldehyde (2-FA), 5-hydroxymethylfurfural (5-HMF), and the organic acids (formic and acetic acid) were analysed by an HPLC using a Flexar LC instrument (PerkinElmer, Seer Green, Bucks., UK) equipped with refractive index and photo diode array detectors (outputting chromatograms at 210, 280, and 325 nm wavelengths) in series. The analyses were carried out using an Aminex HPX-87H organic acid analysis column (Bio-Rad Laboratories Ltd, Hemel Hempstead, UK) operating at 65 °C with 0.004 mol/l H2SO4 (Sigma-Aldrich) as the mobile phase at a flow rate of 0.6 ml/min.
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8

QuEChERS Extraction and Clean-up

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For the QuEChERS extraction, 7 mL Milli-Q water and 15 mL acetonitrile (ACN) were added to the spiked GFFs. The mixture was shaken head-to-head for 30 min. Afterwards, 5 g of anhydrous magnesium sulphate (MgSO4) and 1.5 g of sodium acetate were added. The tube was then vortexed for 1 min and centrifuged at 3500 rpm for 5 min. For LC-QTOF analysis, an aliquot of 125 µL was transferred to a LC vial, and 25 µL of the LC injection standard mix and 350 µL of Milli-Q water were added. The extract was filtered by a syringe filter (0.2 µm, Whatman) prior to analysis. For the GC-MS/MS analysis, an aliquot of 4.5 mL was transferred into a 15 mL Eppendorf tube, and different steps for the clean-up with a dispersive SPE were tested as described in the “Clean-up of sample extracts” section. For the final d-SPE clean-up, MgSO4, primary secondary amine (PSA) and C18 were added. The tube was vortexed for 1 min and centrifuged at 3500 rpm for 15 min. An aliquot of 3.5 mL was transferred into a Barkey vial and evaporated under nitrogen to 150 µL. A solvent switch was performed by the addition of 150 µL of hexane, vortexing the mixture for 1 min, and transferring the upper hexane phase into a GC vial. 20 µL of the GC injection standard was added before analysis.
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9

Picene Single Crystal Preparation

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All chemicals were used without further purification. The picene single crystals were prepared by the drop-drying method17 (link). The saturated precursor solution was prepared as follows: picene (Alpha Aesar, 99%) powder was dissolved in toluene (Alfa Aesar, 98%) and then sonicated for 30 min. The solution was kept at room temperature for 10 min, and then, the saturated solution was filtrated using a syringe filter with the pore size of 0.02 μm (Whatman, Maidstone, Kent, UK) to remove the undissolved picene. A small amount (approximately 20 μL) of the saturated solution was dropped onto a SiO2/Si substrate and dried under ambient conditions by allowing the evaporation of toluene. Picene crystals were obtained upon evaporation of the solution. Complete evaporation of the solvent took approximately 15 minutes. The obtained crystals were used for further experiments without any other treatments.
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10

Separation of Ginsenoside Compounds

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The CEFBPG was dissolved in the mobile phase of semi-preparative liquid chromatography, then filtered through a 0.45 μm syringe filter (Whatman, Brentford, Middlesex, UK). The resulted clear yellow solution is directly injected into the column by a 7125i Rheodyne injector. The fractions containing individual ginsenoside were collected respectively, and then combined and concentrated under vacuum. Ginsenoside F5 and F3 were finally obtained as white powder.
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