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Dl isocitric acid trisodium salt hydrate

Manufactured by Merck Group
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DL-isocitric acid trisodium salt hydrate is a chemical compound used as a laboratory reagent. It is a salt of the organic acid isocitric acid, with a trisodium cation and a hydrate structure. This product is commonly used in biochemical and analytical applications that require isocitric acid or its sodium salts.

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6 protocols using dl isocitric acid trisodium salt hydrate

1

Treosulfan and Thiotepa Cord Blood HSPC Treatment

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We used a previously established protocol (33 (link)) to treat cord blood-derived HSPCs with approximately IC50 concentrations of treosulfan and thiotepa (4uM and 12,5uM, respectively). Thiotepa treatment was combined with liver enzymes to support conversion to the active metabolites (6 (link)). Used concentrations for these additional compounds were: 0,25% S9 fraction (Aroclor-1254-induced male Sprague Dawley rat liver), 3mM NADP (Sigma) and 15mM DL-isocitric acid trisodium salt hydrate (Sigma).
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2

Isocitrate-Based Metabolic Assay

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TQ05310 was provided by Jiangsu Chia‐Tai Tianqing Pharmaceutical Co., Ltd (Nanjing, China). AG‐221 and doxycycline hyclate were purchased from Selleckchem (Boston, MA, USA). Monoclonal antibodies against IDH1 and Myc‐tag were purchased from Cell Signaling Technology (Danvers, MA, USA). Monoclonal antibodies against IDH2, IDH2‐R172K,20 and GAPDH were purchased from Abcam (Cambridge, UK), MBL International Corporation (Woburn, MA, USA) and AbSci (College Park, MD, USA), respectively. rhEPO was obtained from 3SBio Inc. (Shenyang, China). dl‐Isocitric acid trisodium salt hydrate was purchased from Sigma‐Aldrich (St Louis, MO, USA).
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3

Extracellular Pel Activity Measurement

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Extracellular Pel activity was measured by spectrometry as previously described (Matsumoto et al. 2003 (link)). In brief, bacterial cells were cultured in LB broth supplemented with 0.1% (wt/vol) polygalacturonic acid (PGA) at 28°C for 16 h. When needed, 0.4% (wt/vol) sodium citrate, sodium pyruvate, sodium acetate, sodium fumarate dibasic, α-ketoglutaric acid disodium salt dihydrate, or DL-isocitric acid trisodium salt hydrate (Sigma-Aldrich, St. Louis, MO, U.S.A.) were applied. The OD600 of bacterial cultures was measured and normalized. Culture supernatant was collected by centrifugation of 1 ml of bacterial cultures at 13,000 × g for 2 min. The supernatant (10 μl) was added into 990 μl of the reaction buffer (0.05% [wt/vol] PGA, 0.1 M Tris-HCl [pH 8.5], and 0.1 mM CaCl2, prewarmed to 30°C). Pel activity was monitored at an absorbance at 230 nm for 3 min and calculated based on one unit of Pel activity being equal to an increase of 1 × 10 −3 OD230 in 1 min.
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4

Antioxidant Activity Assays Protocol

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Most reagents including 2,2'-azinobis(3-ethylbenzothiazoline-6-sulfonic acid) diammonium salt (ABTS), bovine serum albumin, 1-chloro-2,4-dinitrobenzene, cumene hydroperoxide, 2,4-dinitrophenylhydrazine (DNPH), 5,5′-dithiobis-2-nitrobenzoic acid, ferrous sulfate, glucose-6-phosphate, L-glutathione reduced, L-glutathione oxidized, glutathione reductase, DL-isocitric acid trisodium salt hydrate, magnesium chloride hexahydrate (MgCl2 × 6 H2O), methylglyoxal solution, potassium dihydrogen phosphate (KH2PO4), S-lactoylglutathione, sodium chloride (NaCl), N,N,N′,N′-tetramethylethylenediamine (TEMED), quercetin, 6-hydroxy-2,5,7,8-tetramethychroman-2-carboxylic acid (Trolox), and xylenol orange were purchased from Sigma-Aldrich (USA). Ethylenediamine-tetraacetic acid (EDTA), 2-(N-morpholino)ethanesulfonic acid (MES) hydrate, NADP+, NADPH, phenylmethylsulfonyl fluoride, and Tris were from Carl Roth (Karlsruhe, Germany). All other reagents were obtained from local suppliers (Ukraine) and were of analytical grade.
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5

Fungal culture media preparation

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Ultrapure water (conductivity 18.2 mΩ) was used in all experiments. For fungal cultures, malt extract was purchased from VWR, EDTA-Na2 and glucose were from Sigma, (NH4)2SO4 and CaCl2 were from Panreac, H3BO3, MnCl2, FeSO4, CuSO4, CoCl2 Na2MoO4, MgSO4, KH2PO4, and ZnSO4 were purchased from Prolabo and Bacto agar was purchased from Fischer.
For analytic methods, CD3OH, HPLC grade organic acid standards (acetic, adipic acid, L-ascorbic acid, benzoic acid, butyric acid, citric acid, isobutyric acid, formic acid, fumaric acid, L-(+)-lactic acid, DL-isocitric acid trisodium salt hydrate, maleic acid, malonic acid, D-(+)-malic acid, oxalic acid, phytic acid, propionic acid, (−)quinic, succinic acid, shikimic acid,D-(−)-tartaric acid), methylchloroformate (MCF), and glucose were purchased from Sigma, HPLC grade ethanol was purchased from Fluka. Dichloromethane was from Carlo Erba Reagents.
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6

Kinase Activity Assay Protocol

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Myelin basic protein from bovine, DL-isocitric acid trisodium salt hydrate, β-nicotinamide adenine dinucleotide phosphate hydrate (NADP+), β-nicotinamide adenine dinucleotide 2′-phosphate reduced tetrasodium salt hydrate (NADPH), α-ketoglutaric acid sodium salt, diaphorase from Clostridium kluyveri, resazurin sodium salt, and ATP disodium salt hydrate were purchased from Sigma-Aldrich. Ketoglutaric acid sodium salt, α-[1-14C], 50μCi (1.85MBq) and glucose, D-[U-14C]- were from PerkinElmer. Glutamine L-[5-14C] and isocitric acid[3H(G)] were from ARC. Inhibitors including dovitinib (TKI-258, CHIR-258), imatinib, AG-490, quizartinib, PP2, erlotinib, ruxolitinib, dasatinib and AG-120 were purchased from Selleckchem. Recombinant proteins including FLT3, SRC, PDGFRα, PDGFRβ, EGFR, MET, KIT, JAK2, FGFR3 and ABL1 were purchased from Thermo Fisher.
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