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Hp 5ms agilent column

Manufactured by Agilent Technologies
Sourced in United States

The HP-5MS Agilent column is a gas chromatography (GC) column designed for the separation and analysis of a wide range of volatile and semi-volatile organic compounds. It features a 5% phenyl-95% dimethylpolysiloxane stationary phase, which provides excellent resolution, inertness, and thermal stability.

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5 protocols using hp 5ms agilent column

1

Anaerobic Bacterial Culture and Characterization

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All chemicals were purchased from commercial
suppliers and used directly as received, unless noted otherwise. The
plasmid pACYC-GroEL/ES-TF was a gift from Karl Griswold (Addgene plasmid
#83923; http://n2t.net/addgene:83923; RRID: Addgene 83923). Metal analysis was conducted in the Microanalytical
Facility in the College of Chemistry at the University of California,
Berkeley, by using a PerkinElmer ICP Optima 7000 DV spectrometer.
All degassed chemicals were rendered anaerobic by equilibration overnight
in a Coy anaerobic chamber equipped with a 1.5–2.5% H2/N2 environment and a palladium catalyst. All aqueous
solutions were prepared using water purified by a Milli-Q Academic
water purifier and exhibited a conductivity of 18.2 MΩ. Genetic
sequencing was performed at the University of California, Berkeley,
DNA Sequencing Facility. Large-scale (>0.5 L) bacterial cultures
were
grown using a LEX-48 bioreactor (Epiphyte3). An Agilent 7890 GC-MS
system equipped with an HP-5MS Agilent column (30m × 0.250 mm
× 0.25 μm) at the Lawrence Berkeley National Laboratory
Catalysis Laboratory was used for GC-MS analysis. Nuclear magnetic
resonance (NMR) spectra were collected on a Bruker AVQ-400 spectrometer
at the University of California, Berkeley, College of Chemistry NMR
Facility.
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2

GC-MS Analysis of Essential Oils and Diterpenes

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Relative abundances of essential oil components and esterified diterpene acids were studied using gas chromatography with mass spectrometric detection (GC-MS). GC-MS analyses were performed using an Agilent Technologies 7890A GC-System coupled with an Agilent 5975C mass selective detector (triple-Axis detector, Agilent Technologies, Wilmington, DE, USA). An autosampler unit (Agilent Technologies 7693-100 positions) held samples. Separation of 1-μL injections used an HP-5MS Agilent column (30 m × 250 μm × 0.25 μm). Operating conditions were as follows: injector split ratio 25:1, temperature 250 °C, carrier gas helium, 1.0 mL/min, and constant flow. Column temperature was 50 °C (no hold) and 5 °C per minute. Then, at 280 °C, it was held at 5 min. Mass fragmentation patterns were acquired at −70 eV using a mass scan range of m/z 30–400.
Primary identifications were performed by comparison of mass spectra with an electronic library database [54 ] and confirmed using arithmetic indices, calculated relative to n-alkanes, when compared with values published in Adams [55 ] by visual comparison against mass spectral images [55 ]. Semi-quantification was achieved by the GC-MS operating software, using data with a minimum peak area of 0.1%, by calculating the area under the curve.
HRESIMS spectra were recorded using an AB Sciex 5600 TripleTOF mass spectrometer in positive mode.
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3

GC-MS Analysis of TMS-Derivatized Extracts

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Gas chromatography coupled mass spectrometry analyses of TMS-derivatized culture extracts were performed using an HP 6890 series GC system fitted with an HP 5973 mass-selective detector and a 30 m × 250 μm HP-5MS Agilent column. The operating conditions were: TGC (injector), 280°C; TMS (ion source), 230°C; oven time program T0 min, 104°C, T2 min, 104°C, T14.4 min, 290°C (heating rate 15°C·min-1), T29.4 min; 290°C.
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4

Quantification of Organic Pollutants in Blood

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Fifty mg of whole freeze-dried blood were weighed in 2 mL Eppendorf vial. The samples were spiked with 50 ng of internal standards solution containing naphthalene d-8, acenaphthene d-10, phenanthrene d-10, chrysene d-12 and perylene d-12. The extraction consisted of adding 1.5 mL of hexane: dichloromethane (1:1), then the samples were vortexed for 1 min and ultrasonicated for 10 min, and this procedure was repeated 3 times without changing the solvent. Samples were centrifuged (10 min, 3500 rpm) and the supernatant was collected. Clean-up was performed with 5 g Florisil Bond Elut cartridges (Agilent Technologies, USA) using 30 mL of hexane: dichloromethane (1:1) as conditioning and elution solvent. The extracts were evaporated near dryness and reconstituted with 250 μL of hexane. Samples were analyzed by gas chromatography coupled to tandem mass spectrometry (GC-MS/MS) using a HP-5MS Agilent column (30 m length x 0.25 mm internal diameter x 0.25 μm film thickness) (Agilent Technologies, Santa Clara, CA, USA) according to a previous method (Velázquez-Gómez et al., 2018) (link). The initial temperature was set at 70 • C and kept for 1 min, then increased at 175 • C in 4 min, from 175 • C to 235 • C in 20 min, and to 305 • C in 8 min. The data was processed using the Mass Hunter Quantitative software.
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5

GC-MS Analysis of Chemical Compounds

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The GC apparatus used in this study was an Agilent 7890A equipped with an Agilent 7683 autosampler, and the split/splitless injector was operated in splitless mode. The apparatus was coupled to an Agilent 5975C mass spectrometer (Agilent Technologies, Inc, Santa Clara, CA, USA). The analytical column was an HP-5MS Agilent column (30 m × 0.25 mm × 0.25 μm, Santa Clara, CA, USA). The chromatograph was programmed for an initial temperature of 80°C for 4 min. The temperature was increased to 200°C at a rate of 70°C/min and then increased to 250°C at a rate of 5°C/min, held for 2 min, and then increased to 300°C at a rate of 50°C/min, held for 5 min. The total run time was 23.7 min. Helium was used as the carrier gas (flow rate: 2 mL/min). The mass spectrometer was operated in the electron impact (70 ev) and selected ion monitoring (SIM) mode both for qualitative and for quantitative analysis, with a solvent delay of 3.75 min. For each analyte, the most abundant and characteristic mass fragment ion was chosen for quantitation along with two others for confirmation, as shown in Table 1. The compounds were subsequently identified based on their relative retention times and the ratio of their respective confirmation ions to their quantitation ion.
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