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10 protocols using hifair 3 reverse transcriptase

1

Quantitative Gene Expression Analysis in Rice

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Total RNA from different samples was extracted by Total RNA Extractor (Trizol) (Sangon Biotech, Shanghai, China) and reverse transcribed into cDNA using Hifair® III; Reverse Transcriptase (Yeasen, Shanghai, China) according to the instruction book.
The RT-PCR was performed using PrimerSTAR MaxDNA Polymerase (TaKaRa, Shiga, Japan), and the appropriate annealing temperature for PCR according to the properties of primer pairs for different genes. The number of amplification reaction cycles in this study was 30. The RT-PCR experiment for each gene was conducted with 3 biological replicates. The PCR products were determined using electrophoresis on the 1% agarose gels. Specific primers for different OsSR genes and the control gene OsActin used for RT-PCR are listed in Table S7.
For the qRT-PCR experiment, SYBR Green qPCR Master Mix (TOROIVD) was used, and the experiment was conducted on LightCycler 480 II (Roche, South San Francisco, CA, USA). The data was analyzed as previously described using OsActin as the internal standard (Livak & Schmittgen, 2001 (link)). The qRT-PCR experiment was carried out using 3 biological replicates, and 3 technical replicates were performed for each biological replicate. The qRT-PCR data was calculated using 2−ΔΔCT method and Student’s t-test. The primer sequences for qRT-PCR are listed in Table S6.
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2

RNA Extraction and cDNA Synthesis

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According to the relative manual, total RNA was isolated using the E.Z.N.A@ Plant RNA kit (Omega Bio-tek Inc., Norcross, GA, USA). We detected the quality and purity of RNA using K5800C (KAIAO, Beijing, China). According to the manufacturer’s protocols, 0.5 ug RNA of each sample was used for 1st strand cDNA synthesis using Hifair® III Reverse Transcriptase (YEASEN, Shanghai, China). Subsequently, the cDNA was diluted 7-fold for RT-qPCR analysis.
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3

Quantification of RNA Expression in Bladder Tissue

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Total RNA was extracted from bladder tissue with FastPure® Cell/Tissue Total RNA Isolation Kit V2 (RC112, Vazyme, Nanjing, China) and reverse transcribed to cDNA using Hifair® III Reverse Transcriptase (11111ES92; YEASEN, Shanghai, China). Then, the Hieff® qPCR SYBR Green Master Mix (11202ES03, YEASEN) on QuantStudio 6 Flex (Applied Biosystems, Thermofisher, USA) was used to conduct qRT-PCR, and 2−ΔΔCt was used to calculate relative RNA levels. The primers used in the qRT-PCR assay are demonstrated in Table 1.
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4

Quantitative Expression Analysis of Genes

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Total RNA was extracted from the cells using TRIzol reagent (Biosharp). For reverse transcription, 1 μg of total RNA was reverse transcribed using Hifair III reverse transcriptase (YEASEN, Shanghai, China). qPCR was performed using the Hieff qPCR SYBR Green Master Mix (YEASEN). Relative RNA expression of selected genes was normalized to β-actin. All of the experiments were performed according to the manufacturer’s instructions. The primer sequences for the detected genes are listed in Table S1.
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5

Quantitative RNA Expression Analysis

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Total RNA was isolated using the RN001 RNA Quick Purification Kit (ESscience, China). Next, the mRNAs were reverse transcribed into cDNA using Hifair® III Reverse Transcriptase (Yeasen Biotech, China). Subsequently, Hieff® qPCR SYBR Green Master Mix (Low Rox Plus) (Yeasen Biotech, China) was used for qPCR on a QuantStudio 7 Flex System (Applied Biosystems, USA). The primer sequences used are shown in Table S1.
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6

Quantitative Real-Time PCR for Gene Expression

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Total RNA was extracted by using an RNA isolation kit (DP430, Tiangen Biotechnology Co., Ltd., Beijing, China). For reverse transcription, Hifair III reverse transcriptase (11141ES60, Yeasen Biotechnology Co., Ltd., Shanghai, China) was used. The mixture was prepared using the Hieff qPCR SYBR green master mix (11201ES08, Yeasen Biotechnology Co., Ltd., Shanghai, China), and the quantitative real-time PCR was performed using the LightCycler 480 system (Roche, Switzerland). β-actin was used as the endogenous references. The results were calculated using the log10 (2△△CT) method. The primers used were as follows: forward primer (5′-GATGTGGCTGCTGTCAATG-3′) and reverse primer (5′-CACGCTGGGACGAAGG-3′) for EMC10; forward primer (5′-GAGTTTCCTAAAGCCATATTCTG-3′) and reverse primer (5′-ACACCACTACATTCTTCAAGC-3′) for ATP1B3; forward primer (5′-CGTAAAGACCTCTATGCCAACAC-3′) and reverse primer (5′-ACTCATCGTACTCCTGCTTGC-3′) for β-actin.
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7

RNA Extraction and RT-qPCR Analysis

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RNA was extracted from cultured cells or tissues using TRIzol reagent (Takara, # 9109), and cDNA was synthesized using Hifair III Reverse Transcriptase (Yeasen, #11297ES75). Relative gene expression was calculated by normalization to the expression levels of GAPDH or U6. The primers for RT-qPCR were synthesized by HuaGene Biotech.
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8

RNA Extraction and cDNA Synthesis from T. succedaneum

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Total RNA from leaves, roots, and stems of T. succedaneum were isolated by using the TaKaRa MiniBEST Plant RNA Extraction Kit (TAKARA-Bio Inc., Shiga, Japan) according to its manual. The light absorption of RNA at 230 nm (A230), 260 nm (A260), and 280 nm (A280) were determined by using the K5800C spectrophotometer (KAIAO, Beijing, China), and the concentration and purity of RNA were evaluated by the value of A260 and the ratios of 260/280 (1.8–2.1) and 260/230 (2.3–2.6), respectively. RNA samples were assessed by 1.0% agarose gel electrophoresis (AGE). A total of 500 ng RNA from each sample was used for 1st strand cDNA synthesis using Hifair® III Reverse Transcriptase (YEASEN, Shanghai, China) according to the manufacturer’s protocols.
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9

Total RNA Isolation and cDNA Synthesis

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Total RNA was isolated from the leaf of P. yunnanensis using the E.Z.N.A.@ Plant RNA kit (Omega Bio-tek Inc., Norcross, USA) according to its manual. The quality of RNA was evaluated with K5800C (KAIAO, Beijing, China). A total of 500 ng RNA of each sample was used for 1st strand cDNA synthesis using Hifair® Ⅲ Reverse Transcriptase (YEASEN, Shanghai, China) according to the manufacturer’s protocols. cDNA was diluted 8-fold for RT-qPCR analysis.
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10

Curcumin Assays and Protein Detection

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Curcumin was obtained from Yuanye Biotechnology Co. (Shanghai, China). TRIeasyTM Total RNA Extraction Reagent, Hifair® Ⅲ Reverse Transcriptase and Hieff® qPCR SYBR Green Master Mix (No Rox) were provided by Yeasen Biotechnology Co., Ltd. (Shanghai, China). Anti-GAPDH and secondary antibodies (goat anti-rabbit and anti-mouse IgG) were purchased from Proteintech Group (Wuhan, China) and the other primary antibodies (anti-ACSL4, anti-SLC7A11, anti-GPX4 and anti-TfR1) were purchased from Abcam (Cambridge, MA, USA). The Western and IP cell lysis buffer, Total SOD assay kit, MDA detection kit and total GSH assay kit were all obtained from Beyotime Biotechnology Co. (Shanghai, China). The pepsin digestive solution, mouse enhanced polymer assay system assay kit and DAB staining solution were all obtained from ZSGB Biotechnology Co. (Beijing, China).
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