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3 protocols using tissue culture treated glass slide

1

Immunofluorescence Staining of MRP1

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1.105 cells were cultured at 37 °C in 5% CO2 for 48 h in a polystyrene vessel chamber on tissue culture treated glass slide (BD Falcon). Cells were fixed with 4% paraformaldehyde in PBS for 30 min and washed with PBS Ca2+/Mg2+ (Sigma-Aldrich). Cells were then permeabilized with 0.1% Triton-X-100 (Sigma-Aldrich) for 5 minutes, then incubated for 1 h with a saturation solution (10% of goat serum (Sigma-Aldrich), 3% of human serum (Sigma-Aldrich), 0.1% Triton-X-100 (Sigma-Aldrich), 1% BSA (Euromedex), 0.05% Tween 20 (Euromedex) in PBS. Cells were then incubated at 4 °C overnight with the anti-MRP1 monoclonal antibody MRPm6 (Alexis Biochemical), washed and then incubated for 1 h with goat secondary antibody anti-mouse IgG coupled to Alexa Fluor 488 (Life Technologies). Nuclei were counterstained with 4 µM of Hoechst 33258 for 10 min. Samples were examined under a Compact Confocal Power Pack (ZEISS LSM 800 with Airyscan) with a 40 (numerical aperture, 1.2) oil immersion lens. The magnification used may be different depending on the samples.
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2

Immunofluorescence Analysis of Transfected Cells

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Transfected cells (10,000–30,000 cells/well) were seeded in a chamber with tissue culture-treated glass slide (Falcon, 354118). For immunofluorescence analysis, cells were fixed with 4% paraformaldehyde for 20 mins and then permeabilized with 1X PBS containing 0.1% Triton X-100. Cells were incubated with anti-FLAG (1:400 dilution; Cell Signaling, 14793), and anti-HA (1:100 dilution; Cell Signaling, 2367) overnight at 4°C. Alexa Fluor Plus 647- conjugated secondary antibodies (1:400 dilution; Invitrogen, A32733) and Cy3-conjugated secondary antibodies (1:1000 dilution; Jackson ImmunoResearch, 115-165-003) were added followed by incubation at 37°C for 30 mins. Cells were rinsed several times with 1X PBS, stained with DAPI (1 μg/mL; Invitrogen, 62247), and mounted with Vectashield Antifade mounting medium (Vector Laboratories, Inc., H1000). Image acquisition was performed using Olympus Microscope IX71 or BZ-X810 All-in-One Fluorescent Microscopes.
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3

Immunofluorescence Analysis of Autophagy

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The PROM1/CD133+ and PROM1/CD133 cells were plated on Tissue Culture Treated Glass Slide (BD Falcon, 354114) and subjected to PDT treatment (1.3 J/cm2). After 24 h, cells were washed with PBS and fixed with 3.7% paraformaldehyde for 8 min. Fixed cells were permeabilized with 0.1% Triton X-100 in PBS for 15 min, blocked with 3% BSA for 60 min, and incubated with anti-LC3 antibodies (1:200) (Cell Signaling Technology, 3868S) overnight. After washing with PBS, cells were incubated for 1 h with DyLight 488 conjugated secondary antibody (1:500) (BioLink Biotechnology, B0210). Nuclei were counterstained with DAPI (Biotium, 40043) for 5 min. Slides were mounted with a coverslip using Fluoro-Gel (Electron Microscopy Sciences, 17985-10). Cells were imaged using a confocal laser scanning microscope (TCS SP5, Leica Microsystems, Wetzlar, Germany), and the images were analyzed using a Leica Application Suite 2.02. DyLight 488 was excited using an argon laser (488 nm), and DAPI was excited using a diode laser (405 nm). The emission lights for DAPI and DyLight 488 were collected between 410 and 490 nm and between 495 and 540 nm, respectively.
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