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Amv 1st strand cdna synthesis kit

Manufactured by Roche
Sourced in United Kingdom

The AMV 1st Strand cDNA Synthesis Kit is a laboratory instrument designed for the reverse transcription of RNA into complementary DNA (cDNA). It provides the necessary reagents and enzymes to efficiently perform this fundamental step in various molecular biology applications, such as gene expression analysis and cDNA library construction.

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7 protocols using amv 1st strand cdna synthesis kit

1

Quantitative Gene Expression Analysis

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For gene expression studies, RNA was extracted using the RNA easy Mini Kit and cDNA templates were generated with the AMV 1st Strand cDNA Synthesis Kit (Hoffman-La Roche Ltd, UK). Duplex probe hydrolysis-based quantitative reverse transcriptase polymerase chain reaction (qRT-PCR) assays [37 ] were used to measure mRNA transcripts encoding insulin, IGF-1, and IGF-2 polypeptides, their corresponding receptors, and insulin receptor substrate (IRS) Types 1, 2 and 4 (Table 1). Probes were labeled with FAM and the internal control probe for β-actin was labeled with Y555. PCR amplifications were performed in a LightCycler 480 PCR machine and results were analyzed using the LightCycler Software 4.0.
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2

Quantifying CYP Expression in Human Brain

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Total RNA, extracted from 100 mg samples of fresh frozen frontal lobe using the RNeasy Mini Kit (Qiagen, Hilden, Germany), was reverse transcribed using the AMV 1st Strand cDNA Synthesis Kit (Roche, Indianapolis, IL). The resulting cDNA templates were used to measure the expression of 17 cytochrome P450 (CYP) isoforms by qPCR in a Roche Lightcycler 480 System [11 (link)]. Primer pairs were designed using MacVector 12 software (Cary, NC). Relative mRNA abundance was calculated using the 2^-ΔCt method with results normalized to β-actin (Actβ).
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3

Hepatic CYP gene expression analysis

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TheRNeasy Mini Kit (Qiagen, Hilden, Germany) was used to extract total RNA from 100 mg samples of fresh frozen liver. RNA was reverse transcribed using the AMV 1st Strand cDNA Synthesis Kit (Roche, Indianapolis, IL). The resulting cDNA templates were used to measure expression levels of 17 cytochrome P450 (CYP) isoforms (Supplementary Table 1) by qPCR in a Roche Lightcycler 480 System as described [29 (link)]. Primer pairs were designed using Mac Vector 12 software (Cary,NC). Relative mRNA abundance was calculated using the 2ΔΔCt method with results normalized to Hypoxanthine-guanine phosphoribosyltransferase (HPRT) and Beta-actin (Actβ) as internal controls.
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4

Quantitative Gene Expression Analysis

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For gene expression studies, RNA was extracted using the RNA easy Mini Kit and cDNA templates were generated with the AMV 1st Strand cDNA Synthesis Kit (Hoffman-La Roche Ltd, UK). Duplex probe hydrolysis-based quantitative reverse transcriptase polymerase chain reaction (qRT-PCR) assays [37 ] were used to measure mRNA transcripts encoding insulin, IGF-1, and IGF-2 polypeptides, their corresponding receptors, and insulin receptor substrate (IRS) Types 1, 2 and 4 (Table 1). Probes were labeled with FAM and the internal control probe for β-actin was labeled with Y555. PCR amplifications were performed in a LightCycler 480 PCR machine and results were analyzed using the LightCycler Software 4.0.
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5

Quantifying MEN1 and PTN Expression in Frozen Tissues

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The mRNA of frozen tissues was extracted and reverse transcribed using the RNeasy mini kit (Qiagen) and the 1st Strand cDNA Synthesis Kit (AMV) (Roche) according to the manufacturer's instructions. The primers used are shown as follows (Qiagen): Human MEN1 forward primer 5′‐ATCACAGGCACCAAATTGGACAGC‐3′; Human MEN1 reverse primer 5′‐AACACTACCCAGGCATGATCCTCA‐3′; Human PTN forward primer 5′‐TGAAGACCCAGAGATGTAAGAT‐3′; Human PTN reverse primer 5′‐TCTTCTGGCATTCGGCATTG‐3′; Human GAPDH forward primer 5′‐GTCTCCTCTGACTTCAACAGCG‐3′; and Human GAPDH reverse primer 5′‐ACCACCCTGTTGCTGTAGCCAA‐3′.
qRT‐PCR analysis was performed as previously described.28 GAPDH was used as an internal reference for normalization and the relative mRNA expression of each gene was analyzed using the ΔΔCT method as recommended.34
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6

TGFβ1-Induced Gene Expression Analysis

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TC cells were seeded in 24-well plates with a density of 104 cells/well and cultured for 24 h at 37 °C. Cells were starving for 12–24 h before stimulation. 0.05 ng/ml, 0.5 ng/ml or 5 ng/ml TGFβ1 for 24 h or 48 h were used for stimulation, and the PI3K inhibitors were added 2 h before TGFβ1 treatment. Cells were washed thrice with cold PBS, and total RNA was isolated and transcribed into single-stranded cDNA using the 1st Strand cDNA Synthesis Kit (AMV, Roche Molecular Systems, Inc., Branchburg, USA) for Reverse Transcription-Polymerase Chain Reaction (RT-PCR) following the recommendations of the manufacturer. cDNA was synthesized from 1 µg of total RNA using PrimeScript® RT reagent Kit (Takara Bio Inc., Shiga, Japan). PCR was performed with 1 µl of cDNA using GoTaq polymerase (Promega Corporation, Madison, USA) for 25 cycles with specific primers for genes ITGB1 forward primer: GTCTTGGAACGGATTTGATGA and reverse: TTTGCTGGGGTTGTGCTAAT; GAPDH forward: CGGAGTCAACGGATTTGGTCGTAT and reverse: AGCCTTCTCCATGGTGGTGAAGAC. PCR reaction products were resolved through a 0.8% agarose gel in 1 × TAE and stained with Gelred (Biotium Inc., Newark, USA).
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7

RT-PCR Analysis of Gene Expression

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Total RNA preparation was performed as previously described [14 (link)]. For RT-PCR analyses, cDNA synthesis was performed with the 1st Strand cDNA Synthesis Kit (AMV; Roche Diagnostics, Mannheim, Germany). Semi-quantitative RT-PCR analyses were performed as described. Primers used for RT-PCR analyses were as follows: CD74 sense (s) 5′-GACAGTCACCTCCCAGAACC, CD74 antisense (as) 5′-GGCAGATAGTTGCCGTTCTC; GAPDH s 5′-ATGCTGGCGCTGAGTAC, GAPDH as 5´-TGAGTCCTTCCACGATAC; MET s 5′-ATCGATCTGCCATGTGTGC, MET as 5′-CACATATGGTCAGCCTTGTCC; CD44 s 5′-AATATAACCTGCCGCTTTGC, CD44 as 5′-CAGGTCTCAAATCCGATGCT; MIF s 5′-CCGAGAAGTCAGGCACGTAG, MIF as 5′-ATAGTTGATGTAGACCCTGTCCG; CXCR4 s 5′-GCCGACCTCCTCTTTGTCAT, CXCR4 as 5′-TAGTAAGGCAGCCAACAGGC. All PCR products were verified by sequencing.
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