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6 protocols using anti lamp2

1

Western Blot Analysis of Autophagy Markers

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Stable overexpression cells were grown to 90% confluence in 6-well plates and lysed in RIPA buffer supplemented with 1 mM DTT, 1 mM benzamidine, 1 mM PMSF, and 1× protease inhibitor cocktail. The cell suspensions were incubated for 15 min on ice, followed by short sonication. The supernatants of the lysates were collected after centrifugation at 10,000 rpm for 10 min at 4 °C. The samples were heated with 1× SDS loading buffer at 98 °C for 5 to 10 min. Following 10% or 15% SDS–PAGE and wet blot analysis, the blots were probed with one of the following primary antibodies in TBST: anti-p-mTOR (phospho-S2448) (Bioworld, Nanjing, China, Cat. No. BS4706), anti-mTOR (S2442) (Bioworld, Cat. No. BS3611), anti-LC3 (Abcam, Cambridge, UK, Cat. No. ab51520), anti-p62 (Abcam, Cat. No. ab56416), anti-LAMP2 (Proteintech, Wuhan, China, Cat. No. 66301-1-Ig), or anti-GAPDH (Proteintech, Cat. No. 60004-1-Ig). The blots were incubated with horseradish peroxidase-conjugated secondary antibody after three washes, and the signals were visualized using a chemiluminescence (ECL) system (Engreen, Beijing, China, Cat. No. 29100).
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2

EV Protein Marker Verification

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Well‐established markers of purified EVs were verified by western blot analysis. The following antibodies were used: anti‐CD63 (1:1000, 25682‐1‐AP, Proteintech group), anti‐TSG101 (1:2000, 14497‐1‐AP, Proteintech group), anti‐HA (1:3000, 51064‐2‐AP, Proteintech group), anti‐Lamp2 (1:1000, 27823‐1‐AP, Proteintech group), anti‐GM130 (1:5000, 66662‐1‐Ig, Proteintech group) and anti‐Histone‐H3 (1:1000, 17168‐1‐AP, Proteintech group).
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3

Western Blot Analysis of Autophagy Markers

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Total protein was extracted from rat embryonic spinal cords (E11 and E12) or C17.2 cells using radioimmunoprecipitation (RIPA) buffer (Solarbio Science & Technology, Beijing, China). Protein concentrations were determined by a bicinchoninic acid assay (Solarbio Science & Technology). Proteins were separated by 8%–12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis and electrophoretically transferred to polyvinylidene difluoride (PVDF) membranes. After blocking with 5% non-fat milk solution, the membranes were incubated with primary antibodies at 4°C overnight. Following primary antibodies were applied in the experiment: anti-LC3 (Abcam, Cambridge, MA, United States; 1:1000), anti-LAMP2 (ProteinTech, Chicago, IL, United States; 1:1000), anti-Sirt1 (Cell Signaling Technology, Boston, MA, United States; 1:1000), anti-Bhlhe40 (ProteinTech, 1:1000), anti-PINK1 (ProteinTech, 1:1000), anti-VDAC1 (Abcam, 1:2000) and anti-GAPDH (ProteinTech, 1:5000). On the following day, the membranes were washed, and incubated with corresponding secondary antibodies (ProteinTech; 1:5000) at room temperature for 1.5 h. Enhanced chemiluminescent (ECL) reagent (Millipore, Billerica, MA, United States) was applied to detect protein-antibody interactions, which were visualized using a chemiluminescence detection system (C300, Azure Biosystems, United States).
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4

Immunostaining for Autophagy and Lysosomal Markers

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Immunostaining was performed as described elsewhere, particularly in [19 (link)]. The following primary antibodies:anti-Lamp2 (1:100, Proteintech, Beijing, China), anti-LC3 (1:100, CST, Beverly, MA, USA), anti-p62 (1:100, CST, Beverly, MA, USA), anti-Cathepsin B (CTSB) (1:100, CST, Beverly, MA, USA) and anti-Cathepsin D (CTSD) (1:100, Proteintech, Beijing , China) and anti-Parkin (1:100, Proteintech, Beijing, China) and anti-COX IV (1:100, Proteintech, Beijing, China).
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5

Mitochondrial Dynamics and Autophagy Regulation

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The antibodies used in our experiments were: anti-FUNDC1 antibody (Sigma, ABC506), anti-LC3 antibody (Proteintech, 14600-1-AP), anti-p62 antibody (Proteintech, 18420-1-AP), anti-LAMP1 (Boster, M00780-1), anti-LAMP2 (Proteintech, 27823-1-AP), anti-PDK4 antibody (Boster, BA3144), anti-cathepsin-D antibody (Boster, PB0020), anti-TFEB antibody (Proteintech, 13372-1-AP), anti-UQCRC1 antibody (Proteintech, 21705-1-AP), anti-Nrf2 antibody (Proteintech, 16396-1-AP), anti-Keap1 antibody (Proteintech, 10503-2-AP), anti-IP3R1 antibody (Boster, PB0223), anti-VDAC1 antibody (Proteintech, 10866-1-AP), anti-Mfn1 antibody (Proteintech, 13798-1-AP), anti-Mfn2 antibody (Proteintech, 12186-1-AP), anti-ATP6V01 antibody (Proteintech, 13828-1-AP), anti-LDHB antibody (Proteintech, 66425-1-Ig). Secondary antibody for western blotting: HRP-conjugated Affinipure Goat Anti-Mouse IgG(H + L) (Proteintech, SA00001-1), HRP-conjugated Affinipure Goat Anti-Rabbit IgG (H + L) (Proteintech, SA00001-2). Secondary antibody for immunofluorescence: CoraLite488-conjugated Affinipure Goat Anti-Mouse IgG (H + L) (Proteintech, SA00013-1), CoraLite594-conjugated Goat Anti-Rabbit IgG (H + L) (Proteintech, SA00013-4).
Reagents: DCA (Selleckchem, S8615, USA), 3-MA (Selleckchem, S2767, USA), Baf A1 (Selleckchem, S1413, USA), CQ (Selleckchem, S4430, USA), Lactate (Solarbio, L8630, China), 2-DG (GlpBio, GC17430, USA).
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6

Immunofluorescence Assay of Apoptosis and Autophagy

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Primary sheep AMs and RAW264.7 cells were plated in 24-well plates containing sterile coverslips. AMs were infected with M. ovipneumoniae when 70% of the cells were attached to the coverslips. All coverslips were then collected from the plates and fixed with 4% paraformaldehyde for 30 min in room temperature (RT). Thereafter, the cells were permeabilized with 0.1% Triton X-100 (Sigma, 9002-93-1, Shanghai, China) for 15 min in RT and then blocked with 5% goat serum in PBS for 30 min. The primary antibodies were as follows: anti-Bcl-2 (Beyotime; dilution 1:200), anti-BAK (Thermofisher; dilution 1:50), anti-Bax (Thermofisher; dilution 1:50), anti-BAD (Thermofisher; dilution 1:50), anti-caspase 9 (Proteintech; dilution 1:100), anti-Beclin 1 (Proteintech; dilution 1:50-1:500), anti-LC3 (Beyotime; dilution 1:400), anti-Atg5 (Proteintech; dilution 1:50-1:500), anti-phosphp-mTOR (Thermofisher Invitrogen; dilution 1:10-1:50), anti-phospho-NF-Kb (Beyotime; dilution 1:100), anti-phospho-c-Jun(Ser 73) (Thermofisher; dilution 1:100), anti-LAMP1 (Proteintech; dilution 1:200), and anti-LAMP2 (Proteintech; dilution 1:200). The secondary anti-body was anti-Mouse IgG (H+L) Alexa Fluor 488 (Invitrogen; dilution 1:1000), Goat anti-Rabbit IgG (H+L) secondary antibody DyLight 650 (Invitrogen; dilution 1:2000).
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