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28 protocols using follistatin

1

Muscle Protein Isolation and ELISA Analysis

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Protein was isolated from the right extensor digitorum longus muscle of each mouse for ELISA analysis according to the protocol previously described by our lab [21 (link)]. IGF-1 (Cat # MG100), Follistatin (Cat # DFN00), and Leptin (Cat # MOB00) ELISA kits were purchased from R & D Systems. Assays were performed according to manufacturer’s protocol and samples were assayed without dilution. Myostatin (Cat # K1012) ELISA kits were purchased from Alpco diagnostic and performed according to manufacturer’s protocol as we have described previously [21 (link)]. Frozen sections of the EDL muscle were stained using primary antibodies to Follistatin (goat anti-human polyclonal, R&D Systems clone AF-669) and IGF-1 (rabbit anti-human polyclonal, Santa Cruz Biotechnology clone H-70) with donkey anti-goat Alexa Fluor 488 (abcam ab150129) and goat anti-rabbit Alexa Fluor 546 (Life Technologies A11010) secondary antibodies following procedures we have described previously [22 (link)].
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2

Transwell Coculture Assay for Immune Cell Interactions

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Viable cells were counted with a hemocytometer (0.4% Trypan blue solution) and diluted to 40,000 cells per well in 24-wells plates. 344SQP, 344SQR, 344SQ ctrl, or 344SQ-shBMP7 cells were seeded at the top inserts (24-mm Transwell with 0.4-µm pore polycarbonate membrane insert, Sigma-Aldrich), and RAW 264.7, peritoneal macrophages or CD4+ T cells were seeded at the bottom of the transwell system. CD4+ T cells were isolated from splenocytes by using Dynabeads Untouched Mouse CD4 Cells Kit (Thermo Fisher Scientific–Life Technologies, Catalog #11416D) and activated with LEAF purified anti-mouse CD3ε antibody (5 μg/mL) and LEAF purified anti-mouse CD28 antibody (1 μg/mL) (Biolegend). Cells were then cultured in complete medium (RPMI-1640 supplemented with 100 units/mL penicillin, 100 μg/mL streptomycin, and 10% heat-inactivated fetal bovine serum) and incubated at 37 °C in 5% CO2 for 24 or 48 h, after which cells were treated with 250 ng of BMP7 (R&D Systems, Catalog #5666-BP-010) or follistatin (R&D Systems, Catalog #769-FS-025) for 24 or 48 h. follistatin was preincubated with BMP7 at 37 °C for 15 min before their addition to cultures. RNA was then isolated from RAW 264.7 or CD4+ T cells and analyzed for MAPK14, IL1A, IL1B, TNF, CCL5, IL2, and IFNG expression with quantitative PCR.
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3

Tissue Equivalents with Follistatin or ALK Inhibitor

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Tissue equivalents were generated as described above with culture medium being supplemented with ALK4/5/7 inhibitor (2 or 10 μM SB431542; Sigma‐Aldrich), or recombinant follistatin (0.5 ng/ml follistatin; R&D Systems, Abingdon, UK). Corresponding controls were supplemented with 0.04% DMSO or 0.5% PBS containing 1% BSA.
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4

TGF-β and Activin Signaling Modulation

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Recombinant human TGF-β1, activin A, activin B, activin AB, follistatin, and neutralizing monoclonal anti-TGF-β1,-β2,-β3 antibody (#MAB1835) were all from R&D Systems (Wiesbaden, Germany). The ALK4/5/7 inhibitor SB431542 was purchased from Calbiochem/Merck (Darmstadt, Germany) and dissolved in dimethylsulfoxide.
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5

Organotypic Skin Culture Treatments

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Organotypic reconstructs were grown as previously described [6 (link)] with the exception that each culture was rinsed in 1×PBS and incubated with Epidermalization 3 medium lacking serum for two more days before harvesting. The following treatments were added to the organotypic cultures at the time of epithelial seeding and renewed with every media change: Five ng/ml recombinant human TGFβ1, 10ng/ml Activin A, 100 ng/ml Follistatin and 600 ng/ml neutralizing antibody against Activin A (all from R&D Systems, Minneapolis, MN), or 1 µM A83-01 (Tocris, Bristol, UK) and 1 µM GM6001 (Millipore EMD, Billerica, MA). Puromycin treatment at 5 µg/ml on day 5 was applied to induce fibroblast cell death. The culture matrix was washed serially with PBS, before the epithelial cells were seeded.
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6

Stem Cell Differentiation Factors

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PMA was purchased from BIAFFIN GMBH & CO KG. TGFβ1, EGF, Follistatin, and R-spondin 1 were purchased from R&D systems. Wortmannin and Pentagastrin were purchased from Sigma. Noggin was purchased from PeproTech. SB431542 was obtained from Wako. To generate Wnt3A-conditional medium, L-Wnt-3A cells (ATCC, CRL2647) were cultured with the DMEM-High Glucose medium (Invitrogen), which contains 10% Knockout Serum Replacement, 1% Non-Essential Amino Acid Solution, Penicillin-Streptomycin, 2 mM L-Glutamine, and 100 μM β-mercaptoethanol, for 24 hr, and then the conditioned medium was collected.
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7

Hepatocyte Generation from hPSCs

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Hepatocytes were generated from hPSCs by a growth factor‐based differentiation protocol described in our previous protocol [15]. After 20 days of differentiation, the cells were harvested by using a serial 2× TrypLE Express treatment and further dissociated into single cells by passing them through a 40‐μm cell strainer. These single cells were then seeded at 2.5 × 105 cells per well in a collagen I (50 μg/ml, Bio Laboratories, Singapore, http://www.biolab.com.sg, catalog no. 354236)‐coated dishes. Attachment and recovery were promoted by seeding them in step IV differentiation medium with hepatocyte growth factor (R&D Systems, catalog no. 294‐HGN‐005), Follistatin (R&D Systems, catalog no. FS‐288), Oncostatin (R&D Systems, catalog no. 295‐OM‐010), and Y‐27632 (Rock Inhibitor) to prevent anoikis in the freshly harvested hPSC‐HEPs. The next day, medium was changed to Williams E medium (Sigma‐Aldrich, catalog no. W1878) without serum, and cells were serum‐starved overnight before nutraceutical treatments. Nutraceuticals quercetin (Sigma‐Aldrich, catalog no. Q4951) and genistein (Sigma‐Aldrich, catalog no. G6649) were administered at a single dose of 10 μM. Hepatocytes in this work were derived from H9‐ESCs. In hepatic characterization, primary human hepatocytes (PHHs) and HUH7 cells were used as positive controls, and HeLa cells were used as negative controls.
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8

Quantification of Activin-A and Follistatin

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Enzyme linked immunosorbent assay was used for the quantitative measurement of activin-A and follistatin (R&D systems, Minneapolis, USA) in serum and liver homogenates samples. All samples were processed in duplicate and according the manufacturer’s instructions. The optical density of the plates was measured within 10 min using a plate reader at 450 nm and correction at 560 nm as recommended by the manufacturer.
The lowest detection limit of activin-A by the used kit was 3.7 pg/ml and the upper limit was 1,500 pg/ml as reported by the manufacturer. The intra-assay and inter-assay precisions of the kit were 4.3 and 5.8%, respectively. The kit could cross react by 0.2 and 0.45% with inhibin-A and activin-AB, respectively. The detection range of the follistatin kit was 250–16,000 pg/ml and the minimum detectable dose was 83 pg/ml.
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9

Ex Vivo Seminoma Cultures for Treatment Response

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To test whether hanging drop ex vivo cultures are suitable for treatment response experiments, the effects of Activin A and follistatin were investigated in cultured seminoma samples. Activin A treatment (50 ng ml−1; R&D Systems, Minneapolis, MN, USA) and follistatin (100 ng ml−1; R&D Systems) were added to media with 0.1% BSA for 48 h and samples were collected into PFA fixative (4%), RNAlater for RNA purification or set-up in the survival assay (all as described above). The selected treatments and concentrations were based on results from previous experiments with Activin A and follistatin in mouse seminiferous tubule cultures and the human seminoma cell line, TCam-2 (Mithraprabhu et al, 2010 (link); Young et al, 2011 (link)).
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10

Characterization of HDLECs in vitro

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HDLECs were purchased from Lonza (Basel, Switzerland). The cells were maintained in EBM TM-2MV Bullet Kit (cc-3202, Lonza) and used for study after extensive characterization. HEK-BlueTM TGF-β cells (HEK293 cell-derived TGF-β responsive reporter cells) were purchased from InvivoGen (San Diego, CA, USA) and maintained in Dulbecco’s Modified Eagle’s Medium (Nacalai Tesque: Kyoto, Japan) supplemented with 10% Fetal Bovine Serum (FBS, SIGMA: St. Louis, MO, USA), 100 units/mL Penicillin-100 μg/mL Streptomycin (Nacalai Tesque). TGF-β2, TNF-α, and Activin A were purchased from Peprotech (Rocky Hill, NJ, USA). Follistatin was purchased from R&D Systems (Minneapolis, MN, USA). SB431542 and Y27632 were obtained from WAKO Chemicals (Saitama, Japan). Concentrations of TGF-β2 used were determined empirically, based on their ability to alter expression of various endothelial and mesenchymal markers.
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