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9 protocols using mounting medium for fluorescence

1

Quantifying Amyloid Deposition in 5XFAD Mice

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For evaluation of neuropathological changes, 5XFAD and WT animals were sacrificed. The brain was collected and fixed in formalin for histological analysis, as we previously described [29 (link)]. The extent of amyloid deposition was measured by image analysis using 1 mm thickness serial coronal brain slices stained with Thioflavin S (ThS) at 0.025% in ethanol 50% for 8 min. Free-floating sections were rinsed and cover slipped with mounting medium for fluorescence (Vector). Five slices per animal were analyzed. Photomicrographs of samples examined under an epifluorescent microscope (DMI6000B, Leica) were imported into ImageJ, and converted to gray scale images. Threshold intensity was used to quantify amyloid burden. Load of Aβ, defined as the area labeled per total area analyzed, was quantified.
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2

Histological and Immunohistochemical Analysis of Pancreatic Islets

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H&E staining was performed by Pacific Pathology (San Diego) and UCSD pathology core.
For immunohistochemistry, FFPE tissue sections were FFPE tissues sections were deparrafinized and antigen retrieval were performed using Vector Antigen Unmasking buffer (H3301). VectaStain ABC kit and ImmPACT DAB substrate (Vector Lab) were used to develop signal. Antibody used: Pro-insulin (R&D, MAB13361, 1:100). For immunofluorescence staining, FFPE tissues sections were deparrafinized and antigen retrieval were performed using Vector Antigen Unmasking buffer (H3301). Antibody used: insulin (Abcam, ab7842, 1:100), MAFA (Novus, NB400-137, 1:50), NKX6-1 (Cell Signaling, 54551, 1:100), Glucagon (abcam, ab82270, 1:100). DAPI-containing mounting media (VECTASHIELD mounting medium for fluorescence) was used for nuclear staining. Immunostaining was visualized by ZEISS 780 confocal microscopy analysis.
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3

Detecting SFTSV Antibodies via Immunofluorescence

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Indirect immunofluorescence test was applied to determine the reactivity of MAbs with SFTSV, SFTSV-infected Vero-E6 (from the previous experiment)27 (link) were collected and centrifuged at 600 x g for five minutes, and then, the cell pellet was washed three times with PBS and spotted onto the Teflon-coated 8-multi-well glass slide (MP Biochemicals, CA, USA). After the slide was air dried, cells were fixed in cold acetone at 4°C for 10 min. After blocking with BlockAce for 30 min at room temperature, the cells were incubated with 15 μl culture media of the hybridoma cells in a wet chamber at 37°C for 1 h. Then, the slides were washed and air-dried once more, followed by detection using 15 μl of fluorescein isothiocyanate (FITC) conjugated goat anti-mouse IgG (Bethyl Laboratories Inc. Montgomery, USA) at a dilution of 1:50 to every test well and reacting in dark at 37°C for 1h. Finally, the slides were washed and sealed with mounting medium for fluorescence (VectorLaboratories, Inc.). The images were acquired using an OLYMPUS IX73 immunofluorescence microscope.
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4

Immunofluorescence Assay for Respiratory Syncytial Virus

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CPE positive and uninfected (mock) Hep-2 cells were digested by 0.02 % EDTA, spotted to eight well glass slide (MP Biochemicals, CA, USA) separately. The slides were fixed with cold acetone after air drying the cells. After blocking with 3 % BSA for one hour at room temperature, the slides were incubated with sheep anti-HRSV IgG antibody (1:500, Millipore) at 37 °C for one hour followed by washing three times with PBS, the slides were reacted with Alexa Fluor 488 labelled anti-sheep IgG (1:500, Invitrogen) at room temperature for one hour. After additional three washes with PBS, the slides were air dried, sealed with mounting medium for fluorescence (Vector Laboratories, Inc.). The samples were subsequently examined using a fluorescence microscope.
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5

RPE Explant Flat Mount Immunofluorescence

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For RPE explant flat mount, tissues were stained with PI solution at 100 μg/ml, then were fixed with 4% PFA followed by phalloidin and DAPI staining. Tissues were then mounted in mounting medium for fluorescence (Vector laboratories, Burlingame). Pictures were taken using a fluorescence microscopy. Tissues were also collected and embedded in OCT (Fisher Healthcare, 4585) for cryosection and immunofluorescence staining. Tissues were incubated with cold acetone and permeabilized with 0.25% Triton-X/0.05% NaN3 in PBS. After blocking with blocking buffer (1x PBS containing 0.5% Triton-X100 and 5% horse serum), the tissues were then incubated with primary antibodies overnight at 4 °C. After wash with 1x PBST solution, tissues were incubated in secondary antibody conjugated with fluorescence for 2 h (1:500). Nuclei were outlined by DAPI. Tissues were then mounted in mounting medium for fluorescence (Vector laboratories, Burlingame). Primary antibodies: anti-pRIPK3 (mouse): Cell Signaling, 91702S, anti-pMLKL (mouse): Cell Signaling 37333S, anti-RPE65: Abcam, ab231782, Phalloidin: Cell Signaling, 8878S. Secondary antibodies: Alexa fluor 594 goat anti-rabbit IgG (Invitrogen, A11012), Alexa Fluor 488 goat-anti-rabbit IgG (Life technologies, A11008).
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6

Immunofluorescence Staining of Liver VE-Cadherin

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For immunofluorescence staining of the liver, the paraffin-embedded tissues were deparaffinized, rehydrated, and subjected to antigen retrieval by heating for 10 minutes in citrate buffer in a microwave oven. After blocking with 10% bovine serum for 1 hour at room temperature, the sections were incubated with primary antibody against mouse VE-cadherin (Abcam, Shanghai, China) at 4°C overnight, followed by exposure to Cy3-conjugated secondary antibody (Jackson ImmunoResearch Laboratories, West Grove, PA, USA). Nuclear staining was carried out with 4',6-diamidino-2-phenylindole using mounting medium for fluorescence (Vector Laboratories, Burlingame, CA, USA). All images were collected with a Nikon A1 confocal microscope (Nikon, Tokyo, Japan), and the fluorescence intensity was analyzed using Image J software (NIH, Bethesda, MD, USA). The fluorescence signals in at least five different high-power fields from each sample were quantified.
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7

Immunofluorescence Staining for Necroptosis Markers

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Cells were seeded on 0.1% gelatin coated coverslips for immunofluorescence staining. Control and treated cells were fixed in 4% paraformaldehyde (PFA) for 30 min, then were washed with 1x PBS and permeabilized in 1x PBS containing 0.5% Triton-X100. After 1 h incubation in 1x PBST solution (1x PBS containing 0.1% Tween-20) containing 5% horse serum, cells were exposed to 1x PBST diluted primary antibody and incubated overnight at 4 °C. Cells were then washed with 1x PBST solution and incubated in secondary antibody conjugated with fluorescence for 2 h (1:500). Nuclei were outlined by DAPI. Coverslips were mounted in mounting medium for fluorescence (Vector laboratories, Burlingame). Primary antibodies: anti-pRIPK3: Cell Signaling, 93654S, anti-pMLKL: Abcam, ab187091, anti-ZO-1: Invitrogen, MA3-39100-A647. Secondary antibodies: Alexa fluor 594 goat anti-rabbit IgG (Invitrogen, A11012), Alexa Fluor 488 goat-anti-rabbit IgG (Life technologies, A11008). Fluorescent intensity was measured using ImageJ, data was normalized by dividing the intensity of the signals of pRIPK3 or pMLKL by the fluorescence intensity of DAPI.
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8

Flatmount ZO-1 Immunostaining in Mouse Retina

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For flatmount ZO-1 staining, enucleated mouse eye globes were washed in PBS. The anterior chamber, lens, and neuroretina were removed and the eyecup was fixed in 100% methanol for 30 min at room temperature. Next, the eyecup was incubated in blocking buffer containing 0.5% Triton and 5% horse serum (Gibco, Waltham, MA, USA) in PBS for 1 h at room temperature. Primary antibody against zonula occludens (ZO)-1 (1 : 100, Life Technologies) was incubated with the eyecup at 4 °C overnight. Alexa Fluor 594-conjugated goat anti-rabbit (1 : 800) was prepared in PBS and incubated with cells for 1 h at room temperature. After wash with 1× PBS, the eyecup was flat-mounted with DAPI containing mounting medium for fluorescence (Vector) and analyzed under a fluorescence microscope (Nikon). Flatmount PI staining was performed similarly as described elsewhere.59 (link) PI (0.5 μg, Life Technologies) was injected through retro-orbital injection at 15 min before killing the mice. The eye globes were enucleated, anterior part was removed, and retinas were flat-mounted for fluorescence microscopy.
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9

Indirect Immunofluorescent Detection of HNr

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The presence of HNr in GH3 cells was evaluated by indirect immunofluorescent staining. Cells were incubated for 1 h with anti-HNr antibody (Sigma, 1:100), washed and incubated for 1 h with anti-rabbit IgG-FITC (Vector Laboratories, 1:50). Finally, slides were mounted with mounting medium for fluorescence (Vectashield) containing DAPI. Control slides were incubated with the corresponding normal serum or IgG subtype instead of primary antibody. Cells were visualized in a fluorescence light microscope (Axiophot).
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