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6 protocols using anti mpc1

1

Immunohistochemical Analysis of MPC1, P-STAT3, SOX2, and MMP2

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Human Tissue slices were deparaffinized and hydrated by a series of xylene and alcohol treatment, and the procedure was performed as previously described13 (link). The slices were incubated with rabbit polyclonal anti-MPC1 (1:250; Abcam, Cambridge, UK) and anti-P-STAT3(Y705) (1:100; Abcam, Cambridge, UK); anti-SOX2 (1:100; CST, Danvers, MA, USA); anti-MMP2 (1:100; CST, Danvers, MA, USA) antibodies at 4 °C overnight, followed by incubation with avidin–biotin–peroxidase (DAKO). MPC1 expression using the following system: 0, 0–5% positive cells; 1, < 25% positive cells; 2, 25–50% positive cells; 3, 50–75% positive cells; and 4, 75–100% positive cells. The staining intensity was scored as follows: 0, no positive staining; 1, weak staining; 2, moderate staining; 3, strong staining. The final scores were obtained by multiplying the extent scores by intensity scores and analysis using the statistical X-tile software with score of 4 as the cutoff value14 (link).
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2

Comprehensive Western Blot Analysis

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Western blotting was performed as previously described15 . The primary antibodies were as follows: anti-MPC1(1:1000; Abcam, Cambridge, UK); anti-GAPDH (1:1000 CST, Danvers, MA, USA); anti-COX IV (1:1000 CST, Danvers, MA, USA); anti-β-actin (1:1000 CST, Danvers, MA, USA); anti-P-STAT3 (Y705)(1:1000; CST, Danvers, MA, USA); anti-P-STAT3 (S727) (1:1000; CST, Danvers, MA, USA); anti-STAT3 (1:1000; CST, Danvers, MA, USA); anti-OCT4 (1:1000 CST, Danvers, MA, USA); anti-MMP2 (1:1000 CST, Danvers, MA, USA); anti-MMP3 (1:1000 CST, Danvers, MA, USA); anti-MMP7 (1:1000 CST, Danvers, MA, USA); anti-SOX2 (1:1000; CST, Danvers, MA, USA); anti-NANOG (1:1000; CST, Danvers, MA, USA).
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3

MTT Assay with HDAC Inhibitors

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3-(4, 5-Dimethylthiazol-2-yl)-2, 5-diphenyltetrazolium bromide (MTT) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Tubacin (HY-13428) was purchased from Med Chem Express (Monmouth Junction, NJ). ACY-1215 was purchased from Selleck (shanghai, China). The following anti-body were used: anti-MPC1, anti-NR2F2 (Abcam, Cambridge, MA, USA); anti-HDAC6, anti-HIF1α, anti-β-Catenin, anti-LaminA/C, anti-beta actin (Proteintech, Chicago, IL, USA); anti-Acetyl-β-Catenin (Lys49) #9534, anti-acetyl-α-Tubulin (Lys40) #3971 (Cell Signaling Technology, Beverly, Massachusetts, USA).
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4

Western Blot Analysis of Stem Cell Markers

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Cells and tissue samples were lysed in RIPA lysis buffer (Beyotime, Jiangsu, China) supplemented with protease inhibitors (phenylmethylsulfonyl fluoride [PMSF]; Thermo Fisher Scientific, Waltham, MA, USA) on ice. Lysates were centrifuged at 12,000 g for 15 min at 4°C before aliquots of 20 μg proteins were electrophoresed on 15% SDS-PAGE gels (Bio-Rad Laboratories Inc., Hercules, CA, USA), transferred onto PVDF membranes (EMD Millipore, Billerica, MA, USA), and incubated overnight with primary antibodies: anti-MPC1 (Abcam, 1:500), anti-FLAG (Beyotime, 1:1,000), anti-Sox-2 (Abcam, 1:500), anti-Oct-4 (Abcam, 1:400), anti-Nanog (Abcam, 1:300), and anti-β-actin (Beyotime, 1:1,000). The membranes were then incubated with appropriate HRP-conjugated secondary antibody for 2 h at room temperature. Chemiluminescence was detected using SuperSignal West Femto Maximum Sensitivity Substrate (enhanced chemiluminescence, Thermo Fisher Scientific). β-actin was used as a loading control. All of the experiments were performed in triplicate.
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5

Immunohistochemical Analysis of MPC1 and HIF1α

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Human tissue sections were deparaffinized and hydrated by a series of xylene and alcohol treatment. The sections were incubated with rabbit polyclonal anti-MPC1 (Abcam, Cambridge, UK), and mouse polyclonal anti-HIF1α (Abcam) antibodies at 4 °C overnight, followed by incubation with avidin-biotin-peroxidase (DAKO). MPC1 and HIF1α were considered positive by cytoplasmic staining and the expression levels were semi-quantitatively analyzed using a composite score system by assessing both the percentage and intensity of stained tumor cells. The percentage of positive cells was calculated in high-power fields (HPF) as follows: [10] sections with <1% positive cells were rated as 0; 1-25% positive cells as 1; 26-50% positive cells as 2; 51-75% positive cells as 3, and 76-100% positive cells as 4. The staining intensity was rated as follows: 1 for weak intensity; 2 for moderate intensity; and 3 for high intensity. Points for staining intensity and the percentage of positive cells were multiplied. Tumor specimens were classified into three groups according to overall scoring: 0-1 as negative expression, 2-4 as weak expression, and 6-12 as high expression. Total scores were expressed as: 0-4 as low and 6-12 as high. All sections were evaluated independently by two pathologists without knowledge of the identity of patients and the clinical outcome.
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6

Xenograft Tumor Growth Assay

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All animal experiments were approved by the Institutional Animal Care and Use Committee of the Southwest Hospital, Third Military Medical University (Army Medical University). A total of 1 × 10 5 MPC1overexpressing or control cells were suspended in 50 μl PBS and subcutaneously injected into 6-week-old female NOD-SCID mice (Laboratory Animal Center, Southwest Hospital, Third Military Medical University, China). The size of resultant tumors was measured every 7 days for a month using a Vernier caliper and tumor volume was calculated as: shortest diameter 2 × longest diameter/2. The animals were sacrificed 30 days after tumor cell implantation and subcutaneous xenograft tumors were analyzed by IHC. Tumor tissue sections deparaffinized and hydrated by a series of xylene and alcohol treatment were incubated with rabbit polyclonal anti-MPC1 (Abcam), rabbit polyclonal anti-MMP7 (Cell signaling), and mouse polyclonal anti-HIF1α (Abcam) antibodies at 4 °C overnight, followed by incubation with avidin-biotin-peroxidase (DAKO).
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