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30 protocols using multiset software

1

Multicolor Flow Cytometry Immunophenotyping

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A total of 100 µL of fresh samples were added into flow-type sample tube 1 and tube 2. Twenty µL mouse anti-rabbit CD4-FITC/CD8-PE/CD3-PCS mixed antibody (Beckman Coulter, USA) was added to tube 1. Twenty µL of the same type of control antibody was added to tube 2, incubated at 4°C for 30 min in the dark and then washed with phosphate buffered saline (PBS) buffer. The supernatant was removed and this step was repeated 2 times, centrifuged at 60 g for 10 min at 4°C. The red cell lysis solution was added to tubes 1 and 2 (each tube 300 µL). Light was avoided for 20 min at 4°C, washing was repeated 2 times, and PBS 200 µL cell liquid suspension was added. Tube 2 was used as a negative control to adjust the parameters, and tube 1 was used for detection. Lymphocyte gating was selected according to cell size. Next, using the CD3+ cells as gating, the percentage of CD4+, CD8+ T lymphocyte subsets could be obtained. The distribution of CD4+ CD25+ Foxp3+ lymphocyte subsets was detected using mouse anti rabbit CD4-FITC/CD25-PE antibody mix (Beckman Coulter), and the remainder of the procedure followed the above methods. The fluorescence parameters were obtained and analyzed with MultiSET software (Becton Dickinson Bio-sciences, USA).
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2

Immunophenotyping of Whole Blood Samples

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Immunophenotyping was performed using a FACS Calibur flow cytometer (Becton-Dickinson, Franklin Lakes, New Jersey, USA). Samples were analyzed within 24 h of specimen collection. In brief, 20 µl of CD3FITC/CD8PE/CD45perCP/CD4APC or CD3 FITC/CD16+CD56 PE/CD45PerCP/CD19 APC MultiTest reagents (Becton-Dickinson, USA) was mixed with 50 µl of whole blood and incubated in the dark at room temperature for 15 min. Red blood cells were then lysed by adding 450 µl of fluorescence-activated cell sorter lysing solution (Becton Dickinson, USA).The tubes were then incubated at room temperature for another 15 min. MultiSET software (Becton-Dickinson, USA) was used to perform the analysis.
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3

Flow Cytometry for CD4 Cell Count

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The CD4 cell count of clinical samples was measured using the gold standard – flow cytometry. Before measurement, the FACSCalibur system (Beckton Dickinson, San Jose, CA) was calibrated using Becton Dickinson BD CaliBRITE™ Beads. Becton Dickinson Multi-Check CD4 Low Control and Multi-Check Control were used in parallel with clinical samples to ensure accuracy and reliability of flow cytometry. For each measurement, 20 μL of antibody mixture anti-CD3/CD8/CD45/CD4 antibodies and 50 μL blood or control were added to Trucount™ Tubes. After incubation for 15 minutes at room temperature, red blood cells were lysed in 450 μL of 1× FACS Lysing Solution. After another 15 min-incubation, the mixture was loaded to the flow cytometer for CD4 cell count using Becton Dickinson MultiSET™ software. For assessing the capture efficiency of CD4 T+ T lymphocytes to magnetic beads, it was calculated based on the following equation.
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4

Immunophenotype Analysis of Blood Cells

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Immunophenotype analysis was performed on fresh whole blood within 2 h of collection using a direct immunofluorescence cytofluorimetric assay. Flow cytometric acquisition was performed on FACScalibur using MultiSet software (Becton Dickinson, San Jose, USA). At least 10,000 events for each sample were acquired. The proportions of cells expressing CD19+ (B cells), CD3+CD4+ (T helper lymphocytes), CD8+ (cytotoxic/suppressor T lymphocytes), CD8+CD57+ (T lymphocytes with cytotoxic activity), and CD3−CD16+CD56+ (NK cells) were calculated. Absolute values were obtained based on lymphocyte counts provided by an automated Haematology Analyzer (Gen-S, Beckman-Coulter, Fullerton, CA, USA).
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5

Comprehensive Immunophenotyping of T-Cells

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CD4 and CD8 counting was performed from fresh whole blood after staining with labelled antibodies: CD4, CD3, CD8, and CD45 in TruCount tubes (Becton Dickinson Biosciences, California, USA). Samples were assessed by flow cytometry on a FACS Calibur (Becton Dickinson). Analysis was completed using Multiset software (Becton Dickinson Biosciences, California, USA).
To assess the percentage of activated CD4 and CD8 T lymphocytes, cell staining was performed with CD3, CD4 or CD8, CD38, and HLA-DR antibodies. Activated T-cells were defined as those CD4 or CD8 T-cells expressing both CD38 and HLA-DR surface markers. The percentage of naïve CD4 and CD8 was determined with CD62L and CD45RA antibodies whereas the percentage of memory CD4 and CD8 T-cells was evaluated by pan-CD45RO antibody staining.
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6

Multiparameter Flow Cytometry Analysis

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The essential reagents were as follows: stimulin, ionomycin, Golgi blocker, fetal bovine serum, and RPMI 1640 medium (Sigma-Aldrich Corp., St. Louis, MO, USA). Absolute count microspheres-Trucount™ tubes, hemolysin, Multitest CD3-fluorescein isothiocyanate (FITC)/CD8-PE/CD45-PercP/CD4-APC kits, Multitest CD3-FITC/CD16+56-PE/CD45-PercP/CD19-APC kits, and monoclonal antibodies to CD4-FITC, IL-4-PE, IFN-c-APC, IL-17-PE, CD25-APC, and FOXP3-PE (Becton Dickinson and Co., Franklin Lakes, NJ, USA).
In brief, 20 μl of CD3FITC/CD8PE/CD45PercP/CD4APC antibody and 20 μl of CD3FITC/CD16+56-PE/CD45PercP/CD19APC antibody were vortex-mixed with 50 μl of fully anticoagulated blood in separate Trucount tubes, then placed at room temperature for 15 min. Thereafter, the contents of each tube were mixed and incubated with 450 μl of XFACS hemolysin at room temperature for 15 min for flow cytometry. We examined 15,000 cells obtained using the MultiSET™ software (Becton Dickinson and Co.).
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7

Lymphocyte Subsets Enumeration in Whole Blood

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We used the BD Multitest™ IMK kit (340503) to identify and determine the percentage and absolute counts of the following mature human lymphocyte subsets in erythrocyte-lysed whole blood: T lymphocytes (CD3+), B lymphocytes (CD19+), T lymphocytes (CD3+CD4+ and, CD3+CD8+) and natural killer (NK) lymphocytes (CD3−CD16+ and/or CD56+). To define single subsets of CD28+ and CD28− among CD8+ cells we used BD Simultest CD8CD28 (340031). Samples were recorded and analysed on the FACS Calibur (Beckton-Dickinson, Warsaw, Poland) using the Cell-Quest software (BD) and Multiset software (Beckton-Dickinson), respectively.
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8

Immunophenotyping of Whole Blood Cells

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The immunophenotyping parameters were determined in TruCOUNT tube BD (Becton Dickinson, USA) in which 20μl of a cocktail of monoclonal antibodies (CD3FITC+/CD8PE+/CD45+PerCP/CD4APC—Becton Dickinson, USA) were mixed in 50 μl of whole blood cell and incubated in the dark at room temperature for 15 minutes. The red blood cells were lysed by adding 450 μl of a lysing solution (FACS Lysing—Becton Dickinson, USA) incubated in the dark, at room temperature for another 15 minutes. At the end, the samples were read on FACS Calibur flow cytometer (Becton Dickinson, USA) using the Multiset software (Becton Dickinson, USA) within a period of 24 hours after sample preparation.
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9

Enumeration of CD4+ T Cells by Flow Cytometry

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The enumeration of CD4+ T lymphocytes was carried out by flow cytometry (FACS Calibur, BD Biosciences, San Jose, CA, USA) using the anticoagulated whole blood following the manufacturer's protocol. Tru-COUNT reagent containing monoclonal antibodies for CD3, CD45, and CD4 labelled with fluorescent dyes (PE, PerCP, and FITC, resp.) was mixed with anticoagulated whole blood and red blood cells were lysed with lysing solution before enumeration. BD MultiSET software (BD Biosciences) was used to determine the absolute CD4+ T cell counts.
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10

CD4 Cell Counting Protocol

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CD4 count was done using BD FACS count CD4 reagents from BD Biosciences (Bectson Dickinson and Company, San Jose, CA) following the instruction manual provided by the manufacturer. Appropriate amount of monoclonal antibody reagent and whole blood (50 μL) was directly added to the tube to dissolve the lyophilized pellet, releasing a known number of fluorescent beads. During analysis, the absolute number (cells/μL) of positive cells in the sample was determined by comparing cellular events to bead events using BD Multi SET software (supplied with the instrument, BD FACSCalibur).
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