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6 protocols using sodium citrate solution

1

Immunohistochemical Analysis of Lung Tissue

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The paraffin-embedded lung sections were dewaxed and cleared with xylene, followed by hydration with gradient ethanol. Then, the sections were retrieved with sodium citrate solution (pH 8.0; Beyotime, Shanghai, China) for 20 min. The sections were blocked with blocking solution (7.5% goat serum and 0.5% Triton X-100 in PBS; Beyotime, Shanghai, China) for 1 h and incubated with primary rabbit (anti-CD31, Abcam, ab6994, 1:200) anti-Sema7a (Abcam, ab23578, 1:200), anti-RAGE (Abcam, ab21171, 1:200), and anti-Ki67 (Abcam, ab15580, 1:1000) antibodies overnight at 4 °C. The sections were washed twice with PBST (PBS with 1% tween) and once with PBS, and then incubated with secondary antibodies and DAPI mix for 1 h at room temperature. After washing for three times with PBS, the sections were covered with anti-florescence quencher and sealed with nail polish.
TUNEL staining was applied using the one-step TUNEL apoptosis assay kit according to the manufacturer's instructions. Briefly, the sections were dewaxed, rehydrated, and retrieved using antigen. Then, the sections were incubated with 20 μg/mL of protein K for 30 min at room temperature. After washing with PBS, the sections were incubated with 50 µL of TUNEL detection solution (5 µL of TdT enzyme and 45 µL of fluorescein labeling solution) at 37 °C for 1 h.
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2

FNBP4 Expression in HCC Tissues

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Paraffin-embedded tissues from HCC patients were cut into three µm slices. Antigen repair was performed by high temperature and high pressure with sodium citrate solution (Beyotime, China). Endogenous peroxidase was inactivated with 3% hydrogen peroxide solution for 10 mins and then blocked with goat serum at room temperature for 30 mins. Then, the sections were incubated overnight at 4°C with the FNBP4 (Invitrogen, PA5-59035, 1:200) specific primary antibody. After incubating goat anti-rabbit secondary antibody at room temperature for 30 mins, immunohistochemistry (IHC) was performed using a polymer horseradish peroxidase detection system (Zhongshan Goldenbridge Biotechnology, China) and the sections were photographed by an inverted microscope (Olympus, BX41).
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3

Immunohistochemical Analysis of HCC Biomarkers

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Paraffin-embedded tissues from HCC patients were cut into three µm slices. Antigen repair was performed by high temperature and high pressure with sodium citrate solution (Beyotime, China). Endogenous peroxidase was inactivated with 3% hydrogen peroxide solution for 10 mins and then blocked with goat serum at room temperature for 30 mins. Then, the sections were incubated overnight at 4°C with the following specific primary antibodies: Ki-67 (CST, 9449, 1:800), FBXO43 (Proteintech, 55176-1-AP, 1:400), and CCND1 (CST, 2978, 1:100). After incubating goat anti-mouse or goat anti-rabbit secondary antibodies at room temperature for 30 mins, immunohistochemistry (IHC) was performed using a polymer horseradish peroxidase detection system (Zhongshan Goldenbridge Biotechnology, China). The positive staining was observed and photographed by an inverted microscope, and positive cells of the staining were counted by ImageJ.
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4

Immunohistochemistry Assay for Protein Expression

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The immunohistochemistry assay was performed as previously described [23 (link)]. Briefly, sections were deparaffinized and rehydrated, antigen retrieved using sodium citrate solution (Beyotime), blocked with Immunofluorescence blocking solution (Beyotime), then incubated with primary antibody at 4 °C overnight and HRP‐labeled rabbit or mouse second antibodies (Boster, Wuhan, China). Finally, the sections were stained using DAB reagent kit (Beyotime). Images were captured with an upright immunohistochemistry microscope NIKON Eclipse Ni‐U (Nikon). The primary antibodies are as follow: RAB1B (ABclonal; 1 : 200), PA2G4 (ABclonal; 1 : 100) and SDF4 (ABclonal; 1 : 100).
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5

Immunohistochemical Analysis of Annexin A10 in LIHC

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This study was approved by the Ethics Committee of the Second Affiliated Hospital of Chongqing Medical University and acquired informed consent from all patients who participated in this study. All methods were performed in accordance with the Helsinki declaration guidelines and regulations. The tissue samples of 20 patients with LIHC were obtained from the Second Affiliated Hospital of Chongqing Medical University. Recombinant anti-Annexin A10 was purchased from Abcam. Tissues embeded in paraffin were sliced into 3 µm thick sections. Antigen was repaired by sodium citrate solution (Beyotime, China). Immunohistochemistry (IHC) was carried out with the detection system of polymer horseradish peroxidase (Zhongshan Goldenbridge Biotechnology, China). The incubation of sections is the following specific primary antibodies: Anxa10(Abcam, ab213656, 1:1000).
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6

Immunohistochemical Analysis of FOXM1 in Placental Tissues

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Placental tissues were fixed in 10% formaldehyde at 4°C for 24 h, embedded in paraffin and cut into 5-µm-thick sections. Then, sections were dewaxed using xylene and rehydrated in a descending alcohol series. Antigen retrieval was achieved by incubation with sodium citrate solution (Beyotime Institute of Biotechnology) and the sample was heated in the microwave at 97°C for 12 min. Following washing of the sections, they were incubated with 3% hydrogen peroxide at room temperature for 10 min. Following blocking with 10% goat serum (Beyotime Institute of Biotechnology) at room temperature for 1 h, sections were incubated with rabbit anti-human FOXM1 primary antibodies (cat. no. ab83097; 1:50; Abcam) overnight at 4°C. Samples were then washed with PBS, incubated with the goat anti-rabbit horseradish peroxidase conjugated secondary antibodies (cat. no. ab6721; 1:1,000; Abcam) for 1 h at room temperature and washed with PBS. Finally, sections were developed with chromogenic reagent 3′3-diaminobenzidine for ~10 sec at room temperature, counterstained with hematoxylin for 20 sec at room temperature, mounted with neutral gum and observed using a Nikon TS100-F optical microscope (Nikon Corporation, Tokyo, Japan; magnification, ×500).
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