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7 protocols using hoechst 33342

1

Hoechst 33342 Apoptosis Assay in ATDC5 Cells

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Hoechst 33342 staining was used to study the apoptosis of ATDC5 cells. Cells were seeded into a 96-well plate at a density of 7×103 cells/well, cultured in 100 µl medium and treated with HMGB1 (0, 10, 50, 100 and 300 ng/ml) or IL-1β (5 ng/ml) in a humidified incubator with 5% CO2 at 37°C overnight. Subsequently, the medium was removed, and the cells were fixed at 4°C in 4% paraformaldehyde for 1 h and permeabilized in saponin (0.1% v/v in PBS-BSA). Hoechst 33342 (1 µg/ml; Promega Corporation) was added to each well, and the cells were further incubated in the dark for 30 min at 37°C. To assess specific apoptosis, apoptotic and living cells with condensed and fragmented nuclei were visualized using a blue filter of a Nikon TE2000-U inverted fluorescence microscope (Nikon Corporation) at ×200 magnification. The experiments were repeated three times.
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2

Immunofluorescence Assay for C-PARP Detection

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Cells were fixed with 2% paraformaldehyde for 30 minutes, and permeabilized with 0.1% Triton X-100 for 20 minutes, then blocked with 1% bovine serum albumin for 1 hour. Rabbit anti-C-PARP antibody (Cell Signaling Technologies) was added and incubated for 1 hour. After washing with PBS, cells were incubated with goat anti-rabbit IgG conjugated with Texas Red (Invitrogen) and 1 μg/ml Hoechst 33342 (Promega). Cells were then imaged with an ImageXpress 5000 (Molecular Devices).
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3

Radiolabeled Deoxycytidine Synthesis and Characterization

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PG (sodium salt, 17 and 41 kDa), deoxycytidine (dCyd), 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide hydrochloride, N-hydroxysuccinimide, and STZ were obtained from Sigma-Aldrich Corporation (St Louis, MO, USA). N,N-dimethylform-amide, dicyclohexylcarbodiimide, and dimethylaminopyridine (DMAP) were purchased from Fluka (Buchs, Switzerland). The compounds 2-mercaptoethanol, AEBSF, and Hoechst 33342 were obtained from Promega Cooperation (Madison, WI, USA), and 5-(aminoacetamido) fluorescein (fluoresceinyl glycine amide) (AF) was supplied by Invitrogen (Grand Island, NY, USA). The MicroScint™ 40 scintillation cocktail was obtained from PerkinElmer (Boston, MA, USA).
The [5-3H]-2′-deoxycytidine (3H-dCyd) was supplied by American Radiolabeled Chemicals, Inc. (St Louis, MO, USA). The Snakeskin™ dialysis tube (molecular weight cutoff =10,000 Da) was purchased from Pierce (Rockford, IL, USA). The Amicon Microcon centrifugal filter device (molecular weight cutoff =10,000 Da) was purchased from EMD Millipore (Billerica, MA, USA). All other solvents and reagents were commercially available and were of analytical or HPLC grade.
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4

Multifaceted Cellular Imaging Assays

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Quinacrine hydrochloride, pyronaridine tetraphosphate, and tilorone dihydrochloride (BOC Sciences, Shirley, NY), bafilomycin A1, and chloroquine diphosphate (Sigma, St. Louis, MO) were dissolved in either DMSO or water as 10 mM stock solutions and were stored at -20°C. The nucleus staining dye, Hoechst 33342, CellMask Deep™ Red cytoplasmic/nuclear stain, NHS-Alexa-488 dye, the Dual-Glo® Luciferase Assay System and CytoTox 96™ assay kit were purchased from Promega (Promega, Madison, WI). The modified MTT assay Cell Counting Kit 8 was procured from Dojindo Molecular Technologies (Dojindo Molecular Technologies, Gaithersburg, MD). The 96-well high-content imaging plates were obtained from BD (BD Biosciences, Franklin Lakes, NJ) and 96-well white-walled tissue culture plates were from Corning (Corning Life Sciences, MA). The Opera QEHS confocal imaging reader, Acapella™ and Definiens™ image analysis packages were purchased from PerkinElmer (PerkinElmer, USA). Image acquisition was done using Nikon TI eclipse high content imaging enabled microscope running NIS elements high content imaging software (version 4.30.02).
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5

Analytical Grade Chemicals Protocol

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The chemicals used in this study were of analytical grade, purchased from Sigma-Aldrich (Merck, USA), including dimethyl sulfoxide (DMSO), sucrose, magnesium sulfate (MgSO4·7H2O), potassium chloride (KCl), potassium dihydrogen phosphate (KH2PO4), calcium nitrate [Ca(NO3)2], ferric chloride (FeCl3), manganese sulfate (MnSO4), zinc sulfate (ZnSO4), Hoechst 33342, and propidium iodide, as well as amphotericin B. BacTiter-Glo luminescent microbial cell viability assay kits were obtained from Anatech (Promega, Madison, WI, USA).
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6

Immunofluorescence Profiling of Tumor Proteins

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Serial tissue sections were cut from the paraffin-embedded formalin-fixed tumor tissue and subjected to immunofluorescence and hematoxylin and eosin (HE) histological staining. Briefly, tissue sections were deparaffinized, hydrated, and stained using antibodies against Groα (1:400; bs-0863R), NOD1 (1:20000; orb-77656), NOD2 (1:50, sc-56168) and RIPK2 (1:100, bs-3546R) (Bioss Antibodies, USA), respectively, and an IgG isotype antibody (Santa Cruz, CA) served as negative control; then corresponding secondary antibodies with FITC. The section was also stained with Hoechst 33342 (Promega) to study the nuclear morphology. The specific protein expressions and cell nuclei were investigated under a fluorescence microscope (Nikon, TE2000-U, Japan).
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7

Labeling BMSCs with Hoechst 33342

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The BMSCs of passage 4 were incubated in DMEM/F12 medium with 10% FBS and 20 μmol/L retinoic acid (Sigma, St. Louis, MI, USA) for 3 days before transplantation. They were then incubated in 10 mL medium containing 10 μg/mL Hoechst 33342 (Promega, Madison, WI, USA) for 15 min, washed at least three times with PBS and trypsinized. The final cell suspension (106 cells/mL) in FBS-free DMEM/F12 with 10% (v/v) trypan blue was ready for transplantation.
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