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4 protocols using 4 6 diamidino 2 phenylindole dihydrochloride

1

Thrombus Composition Analysis by IF

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Immediately after the T-TAS analysis, immunofluorescence analysis was performed to determine the composition of thrombi formed in the flow chamber [22 (link)]. Platelets in unfixed thrombi were labeled with FITC-conjugated mouse anti-human CD41 IgG (Beckman Coulter, Miami, FL, USA) for 15 min in the dark. After fixation with OptiLyse C (Beckman Coulter), fibrin (ogen) was detected by using rabbit anti-human fibrinogen IgG (Dako, Tokyo, Japan) labeled with Alexa Fluor 594 (Invitrogen, Carlsbad, CA, USA) for 30 min in the dark. The nuclei of leukocytes were stained with 4′,6-diamidino-2-phenylindole dihydrochloride (Dojindo, Kumamoto, Japan). The entire image of thrombi formed in the flow chamber was analyzed with a BZ-X700 All-in-One Fluorescence Microscope (Keyence Corp., Osaka, Japan). Although fibrin generation could continue until fixation with OptiLyse C, this had little impact on the results.
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2

Seeding and Imaging of MSCs on Hydrogel Pyramids

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MSCs were seeded at 1 × 105 cells/well on the fabricated pGelMA hydrogel pyramid model after
ASP at 10 s, 5 c in a 24-well plate, and cultured at 37 °C under
a humidified 5% CO2 atmosphere. After culturing, the culture
medium was removed, and the hydrogels were washed with D-PBS and fixed
with 4% paraformaldehyde. After washing with water, the hydrogel model
was permeabilized with 0.5% Triton X-100. After being washed with
D-PBS, the specimens were stained with 100 nM rhodamine-phalloidin
(Fujifilm Wako Pure Chemical Industries, Ltd., Osaka, Japan) for 40
min in the dark. After washing 3 times with D-PBS, the hydrogels were
stained with 4′,6-diamidino-2-phenylindole, dihydrochloride
(Dojindo Laboratories, Kumamoto, Japan) diluted 1:500 in D-PBS for
5 min in the dark. After washing with D-PBS, the hydrogels were observed
by using a confocal laser scanning microscope (CLSM) (FV3000, EVIDENT,
Tokyo, Japan).
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3

Immunostaining of Fibrinogen on Filters

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The filter was fixed with OptiLyse C (Beckman Coulter, Marseille, France) for 15 minutes and then treated with phosphate-buffered saline (PBS) for 5 minutes. After three washes with PBS containing 0.1% triton (PBST), unspecific binding sites were blocked by incubation with PBST containing 1% bovine serum albumin (Sigma-Aldrich) for 60 minutes. The filter was then incubated with 60 µg/mL rabbit anti-fibrinogen antibody (Agilent Dako, Santa Clara, CA, USA) in PBST containing 1% bovine serum albumin for 60 minutes. After three washes with PBS, the filter was incubated with 20 µg/mL goat anti-rabbit antibody conjugated with Alexa Fluor 594 (Life Technologies, Eugene, OR, USA) for 60 minutes in the dark. After washing, the filter was incubated with 2 µM 4′,6-diamidino-2-phenylindole dihydrochloride (Dojindo, Kumamoto, Japan) for 5 minutes in the dark. Whole images of the filters were analyzed with the All-in-One Fluorescence microscope BZ-X700 (Keyence Corp., Osaka, Japan) and details were analyzed with the confocal microscope LSM 700 (Zeiss, Oberkochen, Germany).
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4

Pluripotency and Differentiation Assays

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iPSC was reacted with primary antibody, SSEA-4, Tra-1–60 and Tra-1–81 using ES cell characterization kit (Milltenyi Biotec, Germany).
Differentiated three germ layers were stained with anti-Otx2, Brachury and Sox17 antibodies (R&D) and nuclei were stained with 4’,6-diamidino-2-phenylindole, dihydrochloride (Dojindo, Japan).
Patient-specific iPSCs were stained with anti-GAA antibody (Sigma) and anti-LAMP2 antibody (Santa Cruz Biotechnologies, Dallas, TX) and nuclei were stained with DAPI (Dojindo) .
Cardiomyocyte was stained by cardiac troponin T antibody (Thermo Fisher Scientific, Waltham, MA), anti-GAA antibody and nuclei were stained with DAPI (Dojindo).
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